Experiment: m.b. Nalidixic 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_03985 and CA264_03990 are separated by 219 nucleotides CA264_03990 and CA264_03995 are separated by 289 nucleotides
CA264_03985: CA264_03985 - hypothetical protein, at 924,680 to 925,408
_03985
CA264_03990: CA264_03990 - alkyl hydroperoxide reductase, at 925,628 to 926,272
_03990
CA264_03995: CA264_03995 - hypothetical protein, at 926,562 to 926,924
_03995
Position (kb)
925
926
927 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 924.658 kb on + strand at 924.658 kb on + strand at 924.659 kb on - strand at 924.662 kb on + strand at 924.676 kb on - strand at 924.682 kb on - strand at 924.682 kb on - strand at 924.810 kb on - strand, within CA264_03985 at 924.971 kb on - strand, within CA264_03985 at 925.027 kb on + strand, within CA264_03985 at 925.133 kb on + strand, within CA264_03985 at 925.156 kb on + strand, within CA264_03985 at 925.157 kb on - strand, within CA264_03985 at 925.267 kb on + strand, within CA264_03985 at 925.267 kb on + strand, within CA264_03985 at 925.267 kb on + strand, within CA264_03985 at 925.268 kb on - strand, within CA264_03985 at 925.268 kb on - strand, within CA264_03985 at 925.326 kb on - strand, within CA264_03985 at 925.335 kb on + strand, within CA264_03985 at 925.336 kb on - strand at 925.354 kb on - strand at 925.354 kb on - strand at 925.408 kb on + strand at 925.471 kb on - strand at 925.483 kb on - strand at 925.512 kb on + strand at 925.512 kb on + strand at 925.512 kb on + strand at 925.513 kb on - strand at 925.513 kb on - strand at 925.520 kb on + strand at 925.520 kb on + strand at 925.534 kb on + strand at 925.534 kb on + strand at 925.534 kb on + strand at 925.534 kb on + strand at 925.534 kb on + strand at 925.534 kb on + strand at 925.535 kb on - strand at 925.535 kb on - strand at 925.545 kb on + strand at 925.620 kb on - strand at 925.678 kb on - strand at 925.726 kb on + strand, within CA264_03990 at 925.735 kb on + strand, within CA264_03990 at 925.735 kb on + strand, within CA264_03990 at 925.736 kb on - strand, within CA264_03990 at 925.736 kb on - strand, within CA264_03990 at 925.813 kb on + strand, within CA264_03990 at 925.910 kb on + strand, within CA264_03990 at 925.910 kb on + strand, within CA264_03990 at 925.910 kb on + strand, within CA264_03990 at 925.910 kb on + strand, within CA264_03990 at 925.910 kb on + strand, within CA264_03990 at 925.970 kb on + strand, within CA264_03990 at 926.026 kb on + strand, within CA264_03990 at 926.071 kb on + strand, within CA264_03990 at 926.072 kb on - strand, within CA264_03990 at 926.162 kb on + strand, within CA264_03990 at 926.200 kb on - strand, within CA264_03990 at 926.260 kb on + strand at 926.381 kb on + strand at 926.381 kb on + strand at 926.411 kb on + strand at 926.424 kb on + strand at 926.424 kb on + strand at 926.424 kb on + strand at 926.440 kb on - strand at 926.469 kb on + strand at 926.469 kb on + strand at 926.470 kb on - strand at 926.470 kb on - strand at 926.557 kb on - strand at 926.563 kb on + strand at 926.629 kb on - strand, within CA264_03995 at 926.630 kb on + strand, within CA264_03995 at 926.634 kb on + strand, within CA264_03995 at 926.634 kb on + strand, within CA264_03995 at 926.635 kb on - strand, within CA264_03995 at 926.639 kb on + strand, within CA264_03995 at 926.685 kb on - strand, within CA264_03995 at 926.688 kb on + strand, within CA264_03995 at 926.689 kb on - strand, within CA264_03995 at 926.697 kb on + strand, within CA264_03995 at 926.697 kb on + strand, within CA264_03995 at 926.697 kb on + strand, within CA264_03995 at 926.698 kb on - strand, within CA264_03995 at 926.925 kb on - strand at 926.939 kb on + strand at 926.943 kb on - strand at 927.004 kb on - strand at 927.009 kb on - strand at 927.053 kb on - strand at 927.064 kb on - strand at 927.065 kb on + strand at 927.089 kb on + strand at 927.089 kb on + strand at 927.119 kb on + strand at 927.163 kb on + strand at 927.164 kb on - strand at 927.182 kb on - strand at 927.205 kb on + strand at 927.207 kb on + strand at 927.208 kb on - strand at 927.238 kb on + strand at 927.243 kb on + strand at 927.243 kb on + strand at 927.245 kb on + strand at 927.245 kb on + strand at 927.246 kb on - strand at 927.252 kb on + strand at 927.253 kb on - strand at 927.253 kb on - strand at 927.253 kb on - strand at 927.253 kb on - strand at 927.257 kb on + strand at 927.257 kb on + strand at 927.258 kb on - strand at 927.259 kb on + strand at 927.259 kb on + strand at 927.260 kb on - strand at 927.260 kb on - strand at 927.260 kb on - strand at 927.260 kb on - strand at 927.260 kb on - strand at 927.260 kb on - strand at 927.260 kb on - strand at 927.262 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.016 mg/ml remove 924,658 + +0.1 924,658 + +1.0 924,659 - -0.4 924,662 + -0.7 924,676 - +0.2 924,682 - -0.3 924,682 - -0.2 924,810 - CA264_03985 0.18 +0.7 924,971 - CA264_03985 0.40 +0.9 925,027 + CA264_03985 0.48 +0.3 925,133 + CA264_03985 0.62 -0.7 925,156 + CA264_03985 0.65 +1.1 925,157 - CA264_03985 0.65 +0.7 925,267 + CA264_03985 0.81 +0.5 925,267 + CA264_03985 0.81 -0.5 925,267 + CA264_03985 0.81 +0.3 925,268 - CA264_03985 0.81 +1.1 925,268 - CA264_03985 0.81 -0.3 925,326 - CA264_03985 0.89 -0.1 925,335 + CA264_03985 0.90 -1.4 925,336 - +0.4 925,354 - -0.3 925,354 - -1.3 925,408 + -2.1 925,471 - +0.7 925,483 - +0.1 925,512 + +0.3 925,512 + -0.6 925,512 + -0.4 925,513 - +0.3 925,513 - -0.2 925,520 + -1.0 925,520 + +0.2 925,534 + -0.4 925,534 + +0.2 925,534 + -0.4 925,534 + +0.2 925,534 + +1.1 925,534 + -1.0 925,535 - +0.9 925,535 - +0.9 925,545 + +0.0 925,620 - +0.1 925,678 - +0.1 925,726 + CA264_03990 0.15 +0.9 925,735 + CA264_03990 0.17 -0.2 925,735 + CA264_03990 0.17 -0.5 925,736 - CA264_03990 0.17 +1.0 925,736 - CA264_03990 0.17 +0.4 925,813 + CA264_03990 0.29 +0.1 925,910 + CA264_03990 0.44 +0.1 925,910 + CA264_03990 0.44 +0.3 925,910 + CA264_03990 0.44 -0.2 925,910 + CA264_03990 0.44 -0.4 925,910 + CA264_03990 0.44 +0.2 925,970 + CA264_03990 0.53 -0.3 926,026 + CA264_03990 0.62 -0.5 926,071 + CA264_03990 0.69 +0.9 926,072 - CA264_03990 0.69 -0.4 926,162 + CA264_03990 0.83 +1.1 926,200 - CA264_03990 0.89 +0.0 926,260 + +1.1 926,381 + +0.2 926,381 + -0.3 926,411 + -0.2 926,424 + -0.9 926,424 + +3.9 926,424 + +2.2 926,440 - +0.7 926,469 + +1.5 926,469 + +1.5 926,470 - +0.6 926,470 - -0.3 926,557 - +0.3 926,563 + +0.6 926,629 - CA264_03995 0.18 +0.2 926,630 + CA264_03995 0.19 -0.1 926,634 + CA264_03995 0.20 +0.8 926,634 + CA264_03995 0.20 +0.3 926,635 - CA264_03995 0.20 +0.7 926,639 + CA264_03995 0.21 -0.4 926,685 - CA264_03995 0.34 +0.5 926,688 + CA264_03995 0.35 +0.5 926,689 - CA264_03995 0.35 -0.1 926,697 + CA264_03995 0.37 +0.2 926,697 + CA264_03995 0.37 -0.2 926,697 + CA264_03995 0.37 +1.0 926,698 - CA264_03995 0.37 +1.0 926,925 - +1.3 926,939 + -0.3 926,943 - +0.5 927,004 - -0.4 927,009 - +0.1 927,053 - +0.6 927,064 - -1.0 927,065 + +0.2 927,089 + -0.7 927,089 + +0.5 927,119 + -0.3 927,163 + -0.2 927,164 - +0.3 927,182 - +0.5 927,205 + -0.4 927,207 + -1.0 927,208 - +2.3 927,238 + +1.2 927,243 + +1.3 927,243 + +0.1 927,245 + -1.9 927,245 + -0.1 927,246 - +0.0 927,252 + +1.3 927,253 - +1.7 927,253 - -0.3 927,253 - +2.0 927,253 - +0.5 927,257 + +1.0 927,257 + +0.3 927,258 - -0.2 927,259 + -0.2 927,259 + +0.4 927,260 - +0.7 927,260 - +0.5 927,260 - +0.0 927,260 - +0.1 927,260 - -1.6 927,260 - -0.3 927,260 - +1.0 927,262 + +0.6
Or see this region's nucleotide sequence