Experiment: m.b. Nalidixic 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_03485 and CA264_03490 are separated by 256 nucleotides CA264_03490 and CA264_03495 are separated by 256 nucleotides CA264_03495 and CA264_03500 are separated by 139 nucleotides
CA264_03485: CA264_03485 - dodecin, at 812,423 to 812,632
_03485
CA264_03490: CA264_03490 - hypothetical protein, at 812,889 to 813,335
_03490
CA264_03495: CA264_03495 - tRNA pseudouridine(38-40) synthase TruA, at 813,592 to 814,401
_03495
CA264_03500: CA264_03500 - excinuclease ABC subunit A, at 814,541 to 817,096
_03500
Position (kb) 813
814
815 Strain fitness (log2 ratio) -2
-1
0
1
2 at 812.613 kb on - strand at 812.613 kb on - strand at 812.616 kb on - strand at 812.616 kb on - strand at 812.632 kb on + strand at 812.633 kb on - strand at 812.641 kb on + strand at 812.641 kb on + strand at 812.755 kb on + strand at 812.756 kb on - strand at 812.756 kb on - strand at 812.756 kb on - strand at 812.756 kb on - strand at 812.760 kb on + strand at 812.761 kb on - strand at 812.763 kb on - strand at 812.772 kb on - strand at 812.789 kb on + strand at 812.789 kb on + strand at 812.789 kb on + strand at 812.789 kb on + strand at 812.790 kb on - strand at 812.852 kb on - strand at 813.022 kb on + strand, within CA264_03490 at 813.118 kb on + strand, within CA264_03490 at 813.218 kb on + strand, within CA264_03490 at 813.219 kb on - strand, within CA264_03490 at 813.219 kb on - strand, within CA264_03490 at 813.263 kb on + strand, within CA264_03490 at 813.264 kb on - strand, within CA264_03490 at 813.275 kb on + strand, within CA264_03490 at 813.281 kb on + strand, within CA264_03490 at 813.281 kb on + strand, within CA264_03490 at 813.335 kb on + strand at 813.335 kb on + strand at 813.335 kb on + strand at 813.336 kb on - strand at 813.339 kb on + strand at 813.340 kb on - strand at 813.340 kb on - strand at 813.412 kb on + strand at 813.414 kb on + strand at 813.414 kb on + strand at 813.415 kb on - strand at 813.429 kb on + strand at 813.430 kb on - strand at 813.430 kb on - strand at 813.430 kb on - strand at 813.461 kb on + strand at 813.462 kb on - strand at 813.462 kb on - strand at 813.564 kb on + strand at 813.619 kb on - strand at 813.675 kb on - strand, within CA264_03495 at 813.689 kb on - strand, within CA264_03495 at 813.692 kb on + strand, within CA264_03495 at 813.693 kb on - strand, within CA264_03495 at 813.805 kb on + strand, within CA264_03495 at 813.805 kb on + strand, within CA264_03495 at 813.806 kb on - strand, within CA264_03495 at 813.811 kb on + strand, within CA264_03495 at 813.812 kb on - strand, within CA264_03495 at 813.847 kb on + strand, within CA264_03495 at 813.902 kb on - strand, within CA264_03495 at 813.902 kb on - strand, within CA264_03495 at 813.902 kb on - strand, within CA264_03495 at 813.953 kb on + strand, within CA264_03495 at 814.023 kb on - strand, within CA264_03495 at 814.080 kb on - strand, within CA264_03495 at 814.185 kb on + strand, within CA264_03495 at 814.273 kb on - strand, within CA264_03495 at 814.273 kb on - strand, within CA264_03495 at 814.288 kb on - strand, within CA264_03495 at 814.361 kb on + strand at 814.362 kb on - strand at 814.679 kb on + strand at 814.679 kb on + strand at 814.680 kb on - strand at 814.680 kb on - strand at 814.680 kb on - strand at 814.680 kb on - strand at 814.680 kb on - strand at 814.714 kb on + strand at 814.715 kb on - strand at 814.715 kb on - strand at 814.725 kb on - strand at 814.725 kb on - strand at 814.725 kb on - strand at 814.767 kb on - strand at 814.767 kb on - strand at 814.824 kb on + strand, within CA264_03500 at 814.955 kb on - strand, within CA264_03500 at 814.955 kb on - strand, within CA264_03500 at 814.968 kb on - strand, within CA264_03500 at 815.047 kb on - strand, within CA264_03500 at 815.208 kb on + strand, within CA264_03500 at 815.274 kb on + strand, within CA264_03500 at 815.274 kb on + strand, within CA264_03500 at 815.339 kb on + strand, within CA264_03500
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.016 mg/ml remove 812,613 - +0.5 812,613 - -0.6 812,616 - -0.9 812,616 - +0.4 812,632 + +1.2 812,633 - -0.5 812,641 + -0.0 812,641 + +0.1 812,755 + -1.1 812,756 - -1.0 812,756 - +1.3 812,756 - -0.7 812,756 - -0.6 812,760 + -0.3 812,761 - -1.0 812,763 - +1.7 812,772 - -0.7 812,789 + +0.3 812,789 + +0.6 812,789 + -0.0 812,789 + +1.3 812,790 - -0.1 812,852 - +0.3 813,022 + CA264_03490 0.30 +0.8 813,118 + CA264_03490 0.51 -0.9 813,218 + CA264_03490 0.74 -0.1 813,219 - CA264_03490 0.74 -0.1 813,219 - CA264_03490 0.74 -0.4 813,263 + CA264_03490 0.84 +0.3 813,264 - CA264_03490 0.84 +0.1 813,275 + CA264_03490 0.86 -0.8 813,281 + CA264_03490 0.88 +0.0 813,281 + CA264_03490 0.88 +0.2 813,335 + +0.4 813,335 + -0.8 813,335 + -1.7 813,336 - +0.4 813,339 + -0.6 813,340 - -0.2 813,340 - +0.4 813,412 + -0.3 813,414 + -1.3 813,414 + +0.5 813,415 - -0.6 813,429 + -0.1 813,430 - -0.4 813,430 - +0.6 813,430 - -1.1 813,461 + +0.1 813,462 - +0.8 813,462 - +0.5 813,564 + +0.8 813,619 - -0.2 813,675 - CA264_03495 0.10 +0.2 813,689 - CA264_03495 0.12 -1.6 813,692 + CA264_03495 0.12 -0.6 813,693 - CA264_03495 0.12 +0.2 813,805 + CA264_03495 0.26 -0.3 813,805 + CA264_03495 0.26 +0.0 813,806 - CA264_03495 0.26 -0.3 813,811 + CA264_03495 0.27 +0.0 813,812 - CA264_03495 0.27 -0.0 813,847 + CA264_03495 0.31 -0.6 813,902 - CA264_03495 0.38 -0.6 813,902 - CA264_03495 0.38 -1.7 813,902 - CA264_03495 0.38 -0.2 813,953 + CA264_03495 0.45 -0.3 814,023 - CA264_03495 0.53 +0.2 814,080 - CA264_03495 0.60 -0.3 814,185 + CA264_03495 0.73 -2.0 814,273 - CA264_03495 0.84 +0.4 814,273 - CA264_03495 0.84 -0.5 814,288 - CA264_03495 0.86 -0.3 814,361 + +1.7 814,362 - +0.5 814,679 + -0.2 814,679 + +1.3 814,680 - -1.2 814,680 - +1.6 814,680 - -0.9 814,680 - +0.1 814,680 - -0.7 814,714 + +0.2 814,715 - +0.4 814,715 - -0.1 814,725 - -0.4 814,725 - -0.4 814,725 - -0.7 814,767 - +0.2 814,767 - +0.5 814,824 + CA264_03500 0.11 -0.4 814,955 - CA264_03500 0.16 -0.1 814,955 - CA264_03500 0.16 +0.3 814,968 - CA264_03500 0.17 +0.4 815,047 - CA264_03500 0.20 +0.6 815,208 + CA264_03500 0.26 -0.4 815,274 + CA264_03500 0.29 +1.9 815,274 + CA264_03500 0.29 -1.0 815,339 + CA264_03500 0.31 -0.5
Or see this region's nucleotide sequence