Experiment: m.b. Nalidixic 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_02060 and CA264_02065 are separated by 2 nucleotides CA264_02065 and CA264_02070 overlap by 4 nucleotides
CA264_02060: CA264_02060 - primosomal protein N', at 475,428 to 477,959
_02060
CA264_02065: CA264_02065 - hypothetical protein, at 477,962 to 478,210
_02065
CA264_02070: CA264_02070 - LLM class flavin-dependent oxidoreductase, at 478,207 to 479,238
_02070
Position (kb) 477
478
479 Strain fitness (log2 ratio) -2
-1
0
1 at 477.425 kb on + strand, within CA264_02060 at 477.967 kb on + strand at 477.980 kb on + strand at 478.089 kb on - strand, within CA264_02065 at 478.152 kb on + strand, within CA264_02065 at 478.153 kb on - strand, within CA264_02065 at 478.195 kb on - strand at 478.253 kb on + strand at 478.280 kb on + strand at 478.280 kb on + strand at 478.281 kb on - strand at 478.299 kb on + strand at 478.299 kb on + strand at 478.299 kb on + strand at 478.300 kb on - strand at 478.300 kb on - strand at 478.493 kb on + strand, within CA264_02070 at 478.565 kb on + strand, within CA264_02070 at 478.566 kb on - strand, within CA264_02070 at 478.610 kb on - strand, within CA264_02070 at 478.661 kb on + strand, within CA264_02070 at 478.675 kb on + strand, within CA264_02070 at 478.676 kb on - strand, within CA264_02070 at 478.676 kb on - strand, within CA264_02070 at 478.676 kb on - strand, within CA264_02070 at 478.677 kb on + strand, within CA264_02070 at 478.727 kb on - strand, within CA264_02070 at 478.755 kb on + strand, within CA264_02070 at 478.788 kb on - strand, within CA264_02070 at 479.071 kb on - strand, within CA264_02070 at 479.071 kb on - strand, within CA264_02070 at 479.173 kb on + strand at 479.173 kb on + strand at 479.175 kb on + strand at 479.175 kb on + strand at 479.175 kb on + strand at 479.175 kb on + strand at 479.175 kb on + strand at 479.175 kb on + strand at 479.176 kb on - strand at 479.176 kb on - strand at 479.205 kb on + strand at 479.206 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.016 mg/ml remove 477,425 + CA264_02060 0.79 -2.2 477,967 + +0.7 477,980 + -1.1 478,089 - CA264_02065 0.51 -2.7 478,152 + CA264_02065 0.76 -1.4 478,153 - CA264_02065 0.77 -1.2 478,195 - -1.2 478,253 + -1.2 478,280 + -0.2 478,280 + -1.6 478,281 - +0.0 478,299 + +0.2 478,299 + -0.8 478,299 + -0.9 478,300 - -1.8 478,300 - +0.1 478,493 + CA264_02070 0.28 +0.8 478,565 + CA264_02070 0.35 -0.1 478,566 - CA264_02070 0.35 -1.7 478,610 - CA264_02070 0.39 -1.2 478,661 + CA264_02070 0.44 +0.1 478,675 + CA264_02070 0.45 +0.5 478,676 - CA264_02070 0.45 +0.7 478,676 - CA264_02070 0.45 -0.5 478,676 - CA264_02070 0.45 +0.6 478,677 + CA264_02070 0.46 -1.3 478,727 - CA264_02070 0.50 +0.3 478,755 + CA264_02070 0.53 -0.2 478,788 - CA264_02070 0.56 -0.8 479,071 - CA264_02070 0.84 +0.4 479,071 - CA264_02070 0.84 -0.8 479,173 + +0.4 479,173 + -0.7 479,175 + -0.2 479,175 + -0.4 479,175 + -2.1 479,175 + -0.6 479,175 + -0.4 479,175 + +0.1 479,176 - -1.0 479,176 - -0.5 479,205 + +0.0 479,206 - -1.9
Or see this region's nucleotide sequence