Experiment: m.b. Nalidixic 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_02040 and CA264_02045 are separated by 312 nucleotides CA264_02045 and CA264_02050 are separated by 103 nucleotides CA264_02050 and CA264_02055 are separated by 250 nucleotides CA264_02055 and CA264_02060 are separated by 278 nucleotides
CA264_02040: CA264_02040 - zinc carboxypeptidase, at 469,799 to 472,351
_02040
CA264_02045: CA264_02045 - DNA damage-inducible protein DinB, at 472,664 to 473,197
_02045
CA264_02050: CA264_02050 - anion transporter, at 473,301 to 474,716
_02050
CA264_02055: CA264_02055 - hypothetical protein, at 474,967 to 475,149
_02055
CA264_02060: CA264_02060 - primosomal protein N', at 475,428 to 477,959
_02060
Position (kb) 473
474
475 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 472.342 kb on - strand at 472.369 kb on - strand at 472.607 kb on - strand at 472.607 kb on - strand at 472.609 kb on - strand at 472.609 kb on - strand at 472.609 kb on - strand at 472.611 kb on + strand at 472.612 kb on - strand at 472.613 kb on + strand at 472.613 kb on + strand at 472.614 kb on - strand at 472.614 kb on - strand at 472.614 kb on - strand at 472.614 kb on - strand at 472.614 kb on - strand at 472.616 kb on + strand at 472.618 kb on + strand at 472.619 kb on - strand at 472.619 kb on - strand at 472.643 kb on + strand at 472.643 kb on + strand at 472.644 kb on - strand at 472.646 kb on - strand at 472.656 kb on - strand at 472.656 kb on - strand at 472.663 kb on + strand at 472.664 kb on - strand at 472.679 kb on - strand at 472.680 kb on + strand at 472.684 kb on + strand at 472.685 kb on - strand at 472.685 kb on - strand at 472.727 kb on + strand, within CA264_02045 at 472.728 kb on - strand, within CA264_02045 at 472.756 kb on + strand, within CA264_02045 at 472.778 kb on + strand, within CA264_02045 at 472.828 kb on - strand, within CA264_02045 at 472.856 kb on - strand, within CA264_02045 at 472.857 kb on + strand, within CA264_02045 at 472.858 kb on - strand, within CA264_02045 at 472.858 kb on - strand, within CA264_02045 at 473.009 kb on - strand, within CA264_02045 at 473.022 kb on - strand, within CA264_02045 at 473.113 kb on - strand, within CA264_02045 at 473.113 kb on - strand, within CA264_02045 at 473.113 kb on - strand, within CA264_02045 at 473.113 kb on - strand, within CA264_02045 at 473.113 kb on - strand, within CA264_02045 at 473.132 kb on + strand, within CA264_02045 at 473.133 kb on - strand, within CA264_02045 at 473.134 kb on + strand, within CA264_02045 at 473.134 kb on + strand, within CA264_02045 at 473.135 kb on - strand, within CA264_02045 at 473.135 kb on - strand, within CA264_02045 at 473.139 kb on + strand, within CA264_02045 at 473.140 kb on - strand, within CA264_02045 at 473.200 kb on + strand at 473.200 kb on + strand at 473.201 kb on - strand at 473.201 kb on - strand at 473.204 kb on + strand at 473.204 kb on + strand at 473.204 kb on + strand at 473.204 kb on + strand at 473.204 kb on + strand at 473.204 kb on + strand at 473.205 kb on - strand at 473.206 kb on + strand at 473.206 kb on + strand at 473.207 kb on - strand at 473.207 kb on - strand at 473.207 kb on - strand at 473.207 kb on - strand at 473.210 kb on + strand at 473.210 kb on + strand at 473.211 kb on - strand at 473.211 kb on - strand at 473.212 kb on + strand at 473.213 kb on - strand at 473.243 kb on + strand at 473.262 kb on + strand at 473.263 kb on - strand at 473.263 kb on - strand at 473.266 kb on + strand at 473.273 kb on + strand at 473.273 kb on + strand at 473.273 kb on + strand at 473.274 kb on - strand at 473.274 kb on - strand at 473.274 kb on - strand at 473.277 kb on + strand at 473.277 kb on + strand at 473.342 kb on + strand at 473.343 kb on - strand at 473.597 kb on + strand, within CA264_02050 at 473.657 kb on + strand, within CA264_02050 at 473.835 kb on - strand, within CA264_02050 at 473.868 kb on + strand, within CA264_02050 at 473.914 kb on - strand, within CA264_02050 at 473.939 kb on + strand, within CA264_02050 at 473.940 kb on - strand, within CA264_02050 at 473.940 kb on - strand, within CA264_02050 at 473.943 kb on + strand, within CA264_02050 at 473.944 kb on - strand, within CA264_02050 at 473.961 kb on + strand, within CA264_02050 at 473.992 kb on - strand, within CA264_02050 at 474.015 kb on + strand, within CA264_02050 at 474.015 kb on + strand, within CA264_02050 at 474.016 kb on - strand, within CA264_02050 at 474.084 kb on - strand, within CA264_02050 at 474.128 kb on - strand, within CA264_02050 at 474.155 kb on + strand, within CA264_02050 at 474.256 kb on + strand, within CA264_02050 at 474.272 kb on - strand, within CA264_02050 at 474.272 kb on - strand, within CA264_02050 at 474.277 kb on + strand, within CA264_02050 at 474.278 kb on - strand, within CA264_02050 at 474.372 kb on - strand, within CA264_02050 at 474.382 kb on + strand, within CA264_02050 at 474.389 kb on + strand, within CA264_02050 at 474.448 kb on + strand, within CA264_02050 at 474.557 kb on + strand, within CA264_02050 at 474.557 kb on + strand, within CA264_02050 at 474.557 kb on + strand, within CA264_02050 at 474.558 kb on - strand, within CA264_02050 at 474.558 kb on - strand, within CA264_02050 at 474.558 kb on - strand, within CA264_02050 at 474.561 kb on - strand, within CA264_02050 at 474.679 kb on + strand at 474.702 kb on + strand at 474.702 kb on + strand at 474.702 kb on + strand at 474.703 kb on - strand at 474.703 kb on - strand at 474.703 kb on - strand at 474.715 kb on - strand at 474.951 kb on - strand at 474.986 kb on - strand, within CA264_02055 at 475.058 kb on - strand, within CA264_02055 at 475.148 kb on - strand at 475.241 kb on - strand at 475.243 kb on - strand at 475.246 kb on + strand at 475.247 kb on - strand at 475.247 kb on - strand at 475.373 kb on + strand at 475.374 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.016 mg/ml remove 472,342 - +0.8 472,369 - -0.4 472,607 - -1.4 472,607 - -2.3 472,609 - -2.1 472,609 - +0.2 472,609 - +0.5 472,611 + -0.2 472,612 - -0.2 472,613 + +0.6 472,613 + -1.0 472,614 - -0.1 472,614 - -0.9 472,614 - -0.4 472,614 - +0.5 472,614 - -0.3 472,616 + -0.4 472,618 + +0.2 472,619 - -0.4 472,619 - -0.3 472,643 + -0.3 472,643 + +0.0 472,644 - -0.2 472,646 - +0.8 472,656 - -0.7 472,656 - -1.3 472,663 + +0.1 472,664 - -2.0 472,679 - -1.7 472,680 + -0.6 472,684 + -0.3 472,685 - -0.4 472,685 - -0.3 472,727 + CA264_02045 0.12 +0.6 472,728 - CA264_02045 0.12 +0.5 472,756 + CA264_02045 0.17 -0.9 472,778 + CA264_02045 0.21 -0.3 472,828 - CA264_02045 0.31 -1.1 472,856 - CA264_02045 0.36 +0.2 472,857 + CA264_02045 0.36 +0.8 472,858 - CA264_02045 0.36 +0.2 472,858 - CA264_02045 0.36 +0.1 473,009 - CA264_02045 0.65 +0.5 473,022 - CA264_02045 0.67 -0.4 473,113 - CA264_02045 0.84 -0.1 473,113 - CA264_02045 0.84 -0.3 473,113 - CA264_02045 0.84 -0.6 473,113 - CA264_02045 0.84 -0.7 473,113 - CA264_02045 0.84 -0.2 473,132 + CA264_02045 0.88 -0.0 473,133 - CA264_02045 0.88 -0.0 473,134 + CA264_02045 0.88 -1.2 473,134 + CA264_02045 0.88 -0.9 473,135 - CA264_02045 0.88 +0.1 473,135 - CA264_02045 0.88 -1.3 473,139 + CA264_02045 0.89 -0.7 473,140 - CA264_02045 0.89 +0.5 473,200 + -0.2 473,200 + -1.1 473,201 - -0.6 473,201 - +0.8 473,204 + -1.1 473,204 + +0.0 473,204 + +0.7 473,204 + -0.7 473,204 + +1.0 473,204 + -0.4 473,205 - -0.0 473,206 + +0.7 473,206 + +0.1 473,207 - -0.3 473,207 - -0.3 473,207 - -1.8 473,207 - +0.5 473,210 + -0.3 473,210 + +1.2 473,211 - -3.3 473,211 - -0.9 473,212 + -0.0 473,213 - -0.4 473,243 + -0.4 473,262 + -0.5 473,263 - -1.9 473,263 - +0.1 473,266 + +0.1 473,273 + -1.6 473,273 + +0.8 473,273 + -0.8 473,274 - -0.8 473,274 - +0.2 473,274 - +0.6 473,277 + -1.5 473,277 + -0.5 473,342 + -0.3 473,343 - -0.3 473,597 + CA264_02050 0.21 -2.0 473,657 + CA264_02050 0.25 -0.4 473,835 - CA264_02050 0.38 -0.9 473,868 + CA264_02050 0.40 -2.7 473,914 - CA264_02050 0.43 -0.0 473,939 + CA264_02050 0.45 -1.8 473,940 - CA264_02050 0.45 -1.1 473,940 - CA264_02050 0.45 -0.5 473,943 + CA264_02050 0.45 -1.7 473,944 - CA264_02050 0.45 -0.3 473,961 + CA264_02050 0.47 -1.2 473,992 - CA264_02050 0.49 +0.8 474,015 + CA264_02050 0.50 -2.0 474,015 + CA264_02050 0.50 -0.7 474,016 - CA264_02050 0.50 -0.0 474,084 - CA264_02050 0.55 -0.4 474,128 - CA264_02050 0.58 -0.4 474,155 + CA264_02050 0.60 -2.9 474,256 + CA264_02050 0.67 -2.1 474,272 - CA264_02050 0.69 +0.9 474,272 - CA264_02050 0.69 -0.8 474,277 + CA264_02050 0.69 -2.4 474,278 - CA264_02050 0.69 -0.5 474,372 - CA264_02050 0.76 +0.1 474,382 + CA264_02050 0.76 -1.6 474,389 + CA264_02050 0.77 -2.6 474,448 + CA264_02050 0.81 -1.6 474,557 + CA264_02050 0.89 -0.5 474,557 + CA264_02050 0.89 -2.3 474,557 + CA264_02050 0.89 -0.3 474,558 - CA264_02050 0.89 -0.2 474,558 - CA264_02050 0.89 +0.3 474,558 - CA264_02050 0.89 -0.6 474,561 - CA264_02050 0.89 -0.6 474,679 + -1.5 474,702 + -0.4 474,702 + -3.4 474,702 + -2.6 474,703 - -0.8 474,703 - +0.1 474,703 - -0.7 474,715 - +1.4 474,951 - +0.4 474,986 - CA264_02055 0.10 +1.6 475,058 - CA264_02055 0.50 -2.1 475,148 - +0.3 475,241 - -0.5 475,243 - +0.0 475,246 + -3.9 475,247 - -0.0 475,247 - -0.7 475,373 + -0.9 475,374 - -0.8
Or see this region's nucleotide sequence