Experiment: m.b. Nalidixic 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00715 and CA264_00720 are separated by 195 nucleotides CA264_00720 and CA264_00725 are separated by 391 nucleotides
CA264_00715: CA264_00715 - hypothetical protein, at 154,645 to 155,742
_00715
CA264_00720: CA264_00720 - 30S ribosomal protein S20, at 155,938 to 156,195
_00720
CA264_00725: CA264_00725 - pyruvate kinase, at 156,587 to 158,014
_00725
Position (kb)
155
156
157 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 154.977 kb on + strand, within CA264_00715 at 155.097 kb on + strand, within CA264_00715 at 155.142 kb on - strand, within CA264_00715 at 155.150 kb on + strand, within CA264_00715 at 155.169 kb on + strand, within CA264_00715 at 155.170 kb on - strand, within CA264_00715 at 155.204 kb on - strand, within CA264_00715 at 155.308 kb on + strand, within CA264_00715 at 155.319 kb on + strand, within CA264_00715 at 155.320 kb on - strand, within CA264_00715 at 155.320 kb on - strand, within CA264_00715 at 155.598 kb on + strand, within CA264_00715 at 155.598 kb on + strand, within CA264_00715 at 155.598 kb on + strand, within CA264_00715 at 155.659 kb on + strand at 155.727 kb on - strand at 155.730 kb on + strand at 155.743 kb on - strand at 155.788 kb on - strand at 155.822 kb on + strand at 155.822 kb on + strand at 155.823 kb on - strand at 156.193 kb on + strand at 156.230 kb on + strand at 156.277 kb on + strand at 156.283 kb on + strand at 156.284 kb on - strand at 156.330 kb on + strand at 156.401 kb on - strand at 156.413 kb on + strand at 156.414 kb on - strand at 156.414 kb on - strand at 156.417 kb on + strand at 156.418 kb on - strand at 156.424 kb on + strand at 156.506 kb on - strand at 156.516 kb on - strand at 156.519 kb on - strand at 156.520 kb on + strand at 156.521 kb on - strand at 156.521 kb on - strand at 156.564 kb on + strand at 156.569 kb on + strand at 156.570 kb on - strand at 156.570 kb on - strand at 156.570 kb on - strand at 156.599 kb on + strand at 156.599 kb on + strand at 156.600 kb on - strand at 156.673 kb on + strand at 156.673 kb on + strand at 156.674 kb on - strand at 156.679 kb on - strand at 156.949 kb on + strand, within CA264_00725 at 156.987 kb on - strand, within CA264_00725 at 157.005 kb on - strand, within CA264_00725
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.016 mg/ml remove 154,977 + CA264_00715 0.30 +0.6 155,097 + CA264_00715 0.41 +0.6 155,142 - CA264_00715 0.45 -0.0 155,150 + CA264_00715 0.46 +1.2 155,169 + CA264_00715 0.48 +0.7 155,170 - CA264_00715 0.48 -0.2 155,204 - CA264_00715 0.51 -0.5 155,308 + CA264_00715 0.60 +0.0 155,319 + CA264_00715 0.61 +0.0 155,320 - CA264_00715 0.61 -0.6 155,320 - CA264_00715 0.61 +0.0 155,598 + CA264_00715 0.87 +1.1 155,598 + CA264_00715 0.87 +0.0 155,598 + CA264_00715 0.87 -0.6 155,659 + -0.1 155,727 - -0.1 155,730 + -0.3 155,743 - +0.3 155,788 - -0.3 155,822 + -0.4 155,822 + -0.8 155,823 - +0.0 156,193 + -0.1 156,230 + -0.2 156,277 + -0.6 156,283 + -0.9 156,284 - -0.3 156,330 + +1.3 156,401 - +1.0 156,413 + -0.5 156,414 - +1.3 156,414 - +0.3 156,417 + -0.3 156,418 - +1.6 156,424 + -1.8 156,506 - +0.0 156,516 - +0.7 156,519 - +2.7 156,520 + -0.8 156,521 - +0.0 156,521 - +0.9 156,564 + +0.5 156,569 + +0.1 156,570 - -0.6 156,570 - -0.1 156,570 - +0.8 156,599 + +0.9 156,599 + +0.7 156,600 - +2.5 156,673 + +1.7 156,673 + +1.2 156,674 - +3.0 156,679 - +2.0 156,949 + CA264_00725 0.25 +0.9 156,987 - CA264_00725 0.28 -0.3 157,005 - CA264_00725 0.29 +1.4
Or see this region's nucleotide sequence