Experiment: m.b. Nalidixic 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_15105 and CA264_15110 are separated by 232 nucleotides CA264_15110 and CA264_15115 are separated by 184 nucleotides CA264_15115 and CA264_15120 are separated by 68 nucleotides CA264_15120 and CA264_15125 are separated by 63 nucleotides
CA264_15105: CA264_15105 - hypothetical protein, at 3,544,493 to 3,544,726
_15105
CA264_15110: CA264_15110 - hypothetical protein, at 3,544,959 to 3,545,150
_15110
CA264_15115: CA264_15115 - hypothetical protein, at 3,545,335 to 3,545,532
_15115
CA264_15120: CA264_15120 - ribosome biogenesis GTPase Der, at 3,545,601 to 3,546,914
_15120
CA264_15125: CA264_15125 - GTPase Era, at 3,546,978 to 3,547,868
_15125
Position (kb)
3545
3546
3547 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3544.616 kb on + strand, within CA264_15105 at 3544.616 kb on + strand, within CA264_15105 at 3544.704 kb on - strand at 3544.704 kb on - strand at 3544.708 kb on + strand at 3544.716 kb on - strand at 3544.726 kb on + strand at 3544.961 kb on - strand at 3545.050 kb on - strand, within CA264_15110 at 3545.139 kb on + strand at 3545.139 kb on + strand at 3545.140 kb on - strand at 3545.140 kb on - strand at 3545.140 kb on - strand at 3545.164 kb on + strand at 3545.241 kb on + strand at 3545.259 kb on + strand at 3545.324 kb on - strand at 3545.405 kb on - strand, within CA264_15115 at 3545.563 kb on - strand at 3545.573 kb on - strand at 3545.599 kb on - strand at 3545.599 kb on - strand at 3545.599 kb on - strand at 3545.599 kb on - strand at 3546.935 kb on + strand at 3546.969 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.008 mg/ml remove 3,544,616 + CA264_15105 0.53 -0.2 3,544,616 + CA264_15105 0.53 -0.1 3,544,704 - -0.4 3,544,704 - -0.0 3,544,708 + -0.6 3,544,716 - +1.0 3,544,726 + -0.0 3,544,961 - -1.0 3,545,050 - CA264_15110 0.47 -0.7 3,545,139 + +1.8 3,545,139 + -0.4 3,545,140 - +0.4 3,545,140 - +0.5 3,545,140 - -0.5 3,545,164 + -0.1 3,545,241 + -0.3 3,545,259 + +0.1 3,545,324 - -0.2 3,545,405 - CA264_15115 0.35 -2.2 3,545,563 - -0.1 3,545,573 - -0.5 3,545,599 - -0.4 3,545,599 - -0.9 3,545,599 - +0.2 3,545,599 - +0.2 3,546,935 + -1.0 3,546,969 + -0.7
Or see this region's nucleotide sequence