Experiment: m.b. Nalidixic 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_10685 and CA264_10690 are separated by 15 nucleotides CA264_10690 and CA264_10695 overlap by 8 nucleotides CA264_10695 and CA264_10700 overlap by 11 nucleotides
CA264_10685: CA264_10685 - anti-anti-sigma factor, at 2,467,499 to 2,468,371
_10685
CA264_10690: CA264_10690 - anti-anti-sigma factor, at 2,468,387 to 2,468,797
_10690
CA264_10695: CA264_10695 - anti-sigma regulatory factor, at 2,468,790 to 2,469,194
_10695
CA264_10700: CA264_10700 - stage II sporulation protein E, at 2,469,184 to 2,470,212
_10700
Position (kb)
2468
2469
2470 Strain fitness (log2 ratio)
-2
-1
0
1 at 2467.850 kb on + strand, within CA264_10685 at 2467.983 kb on + strand, within CA264_10685 at 2467.984 kb on - strand, within CA264_10685 at 2467.984 kb on - strand, within CA264_10685 at 2468.079 kb on + strand, within CA264_10685 at 2468.104 kb on - strand, within CA264_10685 at 2468.181 kb on + strand, within CA264_10685 at 2468.197 kb on + strand, within CA264_10685 at 2468.212 kb on - strand, within CA264_10685 at 2468.328 kb on + strand at 2468.374 kb on + strand at 2468.375 kb on - strand at 2468.375 kb on - strand at 2468.421 kb on - strand at 2468.430 kb on + strand, within CA264_10690 at 2468.431 kb on - strand, within CA264_10690 at 2468.448 kb on + strand, within CA264_10690 at 2468.449 kb on - strand, within CA264_10690 at 2468.450 kb on + strand, within CA264_10690 at 2468.450 kb on + strand, within CA264_10690 at 2468.451 kb on - strand, within CA264_10690 at 2468.451 kb on - strand, within CA264_10690 at 2468.530 kb on + strand, within CA264_10690 at 2468.575 kb on - strand, within CA264_10690 at 2468.578 kb on + strand, within CA264_10690 at 2468.622 kb on + strand, within CA264_10690 at 2468.625 kb on + strand, within CA264_10690 at 2468.625 kb on + strand, within CA264_10690 at 2468.686 kb on - strand, within CA264_10690 at 2468.688 kb on - strand, within CA264_10690 at 2468.688 kb on - strand, within CA264_10690 at 2468.788 kb on + strand at 2468.789 kb on - strand at 2468.830 kb on + strand at 2468.831 kb on - strand, within CA264_10695 at 2468.852 kb on - strand, within CA264_10695 at 2469.133 kb on + strand, within CA264_10695 at 2469.165 kb on - strand at 2469.201 kb on + strand at 2469.201 kb on + strand at 2469.201 kb on + strand at 2469.202 kb on - strand at 2469.230 kb on - strand at 2469.333 kb on + strand, within CA264_10700 at 2469.334 kb on - strand, within CA264_10700 at 2469.334 kb on - strand, within CA264_10700 at 2469.396 kb on - strand, within CA264_10700 at 2469.469 kb on + strand, within CA264_10700 at 2469.639 kb on + strand, within CA264_10700 at 2469.639 kb on + strand, within CA264_10700 at 2469.640 kb on - strand, within CA264_10700 at 2469.681 kb on - strand, within CA264_10700 at 2469.698 kb on + strand, within CA264_10700 at 2469.698 kb on + strand, within CA264_10700 at 2469.698 kb on + strand, within CA264_10700 at 2469.699 kb on - strand, within CA264_10700 at 2469.699 kb on - strand, within CA264_10700 at 2469.701 kb on - strand, within CA264_10700 at 2469.773 kb on - strand, within CA264_10700 at 2469.773 kb on - strand, within CA264_10700 at 2469.863 kb on + strand, within CA264_10700 at 2469.885 kb on + strand, within CA264_10700 at 2469.886 kb on - strand, within CA264_10700 at 2469.896 kb on - strand, within CA264_10700 at 2469.929 kb on - strand, within CA264_10700 at 2469.980 kb on - strand, within CA264_10700 at 2469.980 kb on - strand, within CA264_10700 at 2469.980 kb on - strand, within CA264_10700 at 2470.059 kb on - strand, within CA264_10700 at 2470.059 kb on - strand, within CA264_10700 at 2470.150 kb on + strand at 2470.151 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.008 mg/ml remove 2,467,850 + CA264_10685 0.40 +1.6 2,467,983 + CA264_10685 0.55 -0.5 2,467,984 - CA264_10685 0.56 -0.8 2,467,984 - CA264_10685 0.56 +0.7 2,468,079 + CA264_10685 0.66 -0.8 2,468,104 - CA264_10685 0.69 +0.6 2,468,181 + CA264_10685 0.78 -1.2 2,468,197 + CA264_10685 0.80 -0.0 2,468,212 - CA264_10685 0.82 +0.2 2,468,328 + -0.0 2,468,374 + -0.5 2,468,375 - -0.2 2,468,375 - +0.5 2,468,421 - -1.8 2,468,430 + CA264_10690 0.10 -0.8 2,468,431 - CA264_10690 0.11 -0.5 2,468,448 + CA264_10690 0.15 +0.0 2,468,449 - CA264_10690 0.15 -0.7 2,468,450 + CA264_10690 0.15 -0.7 2,468,450 + CA264_10690 0.15 -1.6 2,468,451 - CA264_10690 0.16 -0.1 2,468,451 - CA264_10690 0.16 +0.7 2,468,530 + CA264_10690 0.35 -0.4 2,468,575 - CA264_10690 0.46 -0.3 2,468,578 + CA264_10690 0.46 -0.4 2,468,622 + CA264_10690 0.57 -0.6 2,468,625 + CA264_10690 0.58 +0.3 2,468,625 + CA264_10690 0.58 +0.7 2,468,686 - CA264_10690 0.73 +1.3 2,468,688 - CA264_10690 0.73 -1.7 2,468,688 - CA264_10690 0.73 -0.3 2,468,788 + -1.7 2,468,789 - +0.4 2,468,830 + +0.7 2,468,831 - CA264_10695 0.10 +0.1 2,468,852 - CA264_10695 0.15 -0.1 2,469,133 + CA264_10695 0.85 -1.0 2,469,165 - +0.0 2,469,201 + +0.8 2,469,201 + -0.2 2,469,201 + -0.3 2,469,202 - +0.1 2,469,230 - -0.1 2,469,333 + CA264_10700 0.14 -2.3 2,469,334 - CA264_10700 0.15 +0.3 2,469,334 - CA264_10700 0.15 +1.7 2,469,396 - CA264_10700 0.21 -0.2 2,469,469 + CA264_10700 0.28 +1.2 2,469,639 + CA264_10700 0.44 +0.9 2,469,639 + CA264_10700 0.44 -0.7 2,469,640 - CA264_10700 0.44 +0.8 2,469,681 - CA264_10700 0.48 -0.2 2,469,698 + CA264_10700 0.50 +0.3 2,469,698 + CA264_10700 0.50 -0.6 2,469,698 + CA264_10700 0.50 -1.0 2,469,699 - CA264_10700 0.50 -0.4 2,469,699 - CA264_10700 0.50 +0.1 2,469,701 - CA264_10700 0.50 +0.0 2,469,773 - CA264_10700 0.57 -0.5 2,469,773 - CA264_10700 0.57 -0.1 2,469,863 + CA264_10700 0.66 -0.6 2,469,885 + CA264_10700 0.68 +0.1 2,469,886 - CA264_10700 0.68 -0.1 2,469,896 - CA264_10700 0.69 -0.3 2,469,929 - CA264_10700 0.72 +0.0 2,469,980 - CA264_10700 0.77 -1.1 2,469,980 - CA264_10700 0.77 -0.1 2,469,980 - CA264_10700 0.77 -0.3 2,470,059 - CA264_10700 0.85 -0.8 2,470,059 - CA264_10700 0.85 -1.0 2,470,150 + -1.1 2,470,151 - -0.5
Or see this region's nucleotide sequence