Experiment: m.b. Nalidixic 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_10485 and CA264_10490 are separated by 286 nucleotides CA264_10490 and CA264_10495 overlap by 4 nucleotides
CA264_10485: CA264_10485 - lipoprotein-releasing system ATP-binding protein LolD, at 2,431,492 to 2,432,145
_10485
CA264_10490: CA264_10490 - MobA-like protein, at 2,432,432 to 2,433,016
_10490
CA264_10495: CA264_10495 - alanine dehydrogenase, at 2,433,013 to 2,434,203
_10495
Position (kb)
2432
2433
2434 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2431.469 kb on + strand at 2431.470 kb on - strand at 2431.470 kb on - strand at 2431.471 kb on + strand at 2431.472 kb on - strand at 2431.477 kb on - strand at 2432.144 kb on - strand at 2432.156 kb on - strand at 2432.164 kb on - strand at 2432.171 kb on + strand at 2432.171 kb on + strand at 2432.177 kb on + strand at 2432.177 kb on + strand at 2432.177 kb on + strand at 2432.178 kb on - strand at 2432.178 kb on - strand at 2432.202 kb on + strand at 2432.223 kb on - strand at 2432.223 kb on - strand at 2432.236 kb on + strand at 2432.236 kb on + strand at 2432.237 kb on - strand at 2432.251 kb on - strand at 2432.256 kb on + strand at 2432.256 kb on + strand at 2432.256 kb on + strand at 2432.256 kb on + strand at 2432.256 kb on + strand at 2432.257 kb on - strand at 2432.266 kb on + strand at 2432.267 kb on - strand at 2432.269 kb on - strand at 2432.269 kb on - strand at 2432.312 kb on - strand at 2432.314 kb on - strand at 2432.374 kb on - strand at 2432.377 kb on + strand at 2432.377 kb on + strand at 2432.377 kb on + strand at 2432.378 kb on - strand at 2432.378 kb on - strand at 2432.378 kb on - strand at 2432.378 kb on - strand at 2432.378 kb on - strand at 2432.379 kb on + strand at 2432.379 kb on + strand at 2432.379 kb on + strand at 2432.379 kb on + strand at 2432.379 kb on + strand at 2432.379 kb on + strand at 2432.379 kb on + strand at 2432.379 kb on + strand at 2432.379 kb on + strand at 2432.379 kb on + strand at 2432.379 kb on + strand at 2432.380 kb on - strand at 2432.380 kb on - strand at 2432.380 kb on - strand at 2432.380 kb on - strand at 2432.380 kb on - strand at 2432.429 kb on - strand at 2432.434 kb on - strand at 2432.458 kb on + strand at 2432.477 kb on + strand at 2432.477 kb on + strand at 2432.478 kb on - strand at 2432.594 kb on - strand, within CA264_10490 at 2432.695 kb on + strand, within CA264_10490 at 2432.698 kb on - strand, within CA264_10490 at 2432.757 kb on + strand, within CA264_10490 at 2432.822 kb on + strand, within CA264_10490 at 2432.841 kb on + strand, within CA264_10490 at 2432.842 kb on - strand, within CA264_10490 at 2432.916 kb on - strand, within CA264_10490 at 2432.951 kb on + strand, within CA264_10490 at 2432.951 kb on + strand, within CA264_10490 at 2432.952 kb on - strand, within CA264_10490 at 2433.016 kb on + strand at 2433.091 kb on + strand at 2433.218 kb on + strand, within CA264_10495 at 2433.219 kb on - strand, within CA264_10495 at 2433.317 kb on + strand, within CA264_10495 at 2433.318 kb on - strand, within CA264_10495 at 2433.362 kb on + strand, within CA264_10495 at 2433.362 kb on + strand, within CA264_10495 at 2433.363 kb on - strand, within CA264_10495 at 2433.363 kb on - strand, within CA264_10495 at 2433.368 kb on + strand, within CA264_10495 at 2433.368 kb on + strand, within CA264_10495 at 2433.368 kb on + strand, within CA264_10495 at 2433.369 kb on - strand, within CA264_10495 at 2433.369 kb on - strand, within CA264_10495 at 2433.448 kb on + strand, within CA264_10495 at 2433.449 kb on - strand, within CA264_10495 at 2433.485 kb on + strand, within CA264_10495 at 2433.523 kb on + strand, within CA264_10495 at 2433.527 kb on - strand, within CA264_10495 at 2433.528 kb on + strand, within CA264_10495 at 2433.528 kb on + strand, within CA264_10495 at 2433.528 kb on + strand, within CA264_10495 at 2433.529 kb on - strand, within CA264_10495 at 2433.529 kb on - strand, within CA264_10495 at 2433.529 kb on - strand, within CA264_10495 at 2433.529 kb on - strand, within CA264_10495 at 2433.535 kb on + strand, within CA264_10495 at 2433.535 kb on + strand, within CA264_10495 at 2433.641 kb on + strand, within CA264_10495 at 2433.641 kb on + strand, within CA264_10495 at 2433.641 kb on + strand, within CA264_10495 at 2433.642 kb on - strand, within CA264_10495 at 2433.733 kb on + strand, within CA264_10495 at 2433.734 kb on - strand, within CA264_10495 at 2433.752 kb on - strand, within CA264_10495 at 2433.865 kb on - strand, within CA264_10495 at 2433.965 kb on + strand, within CA264_10495 at 2433.965 kb on + strand, within CA264_10495
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.008 mg/ml remove 2,431,469 + -0.3 2,431,470 - +0.0 2,431,470 - -1.4 2,431,471 + +0.1 2,431,472 - +0.1 2,431,477 - -0.2 2,432,144 - +0.1 2,432,156 - -1.0 2,432,164 - +0.2 2,432,171 + +0.3 2,432,171 + +0.0 2,432,177 + -1.4 2,432,177 + -0.5 2,432,177 + +0.0 2,432,178 - +0.8 2,432,178 - +0.3 2,432,202 + +1.2 2,432,223 - +0.9 2,432,223 - -1.1 2,432,236 + -0.4 2,432,236 + -0.8 2,432,237 - -0.1 2,432,251 - -0.4 2,432,256 + -0.1 2,432,256 + -0.3 2,432,256 + -1.0 2,432,256 + +0.0 2,432,256 + +0.5 2,432,257 - +0.5 2,432,266 + -1.9 2,432,267 - -0.2 2,432,269 - -0.9 2,432,269 - +0.8 2,432,312 - +0.2 2,432,314 - -0.2 2,432,374 - +0.1 2,432,377 + +0.1 2,432,377 + -1.9 2,432,377 + -0.7 2,432,378 - +0.5 2,432,378 - +0.5 2,432,378 - +0.8 2,432,378 - -0.6 2,432,378 - -1.0 2,432,379 + +0.1 2,432,379 + -0.5 2,432,379 + +1.9 2,432,379 + -0.1 2,432,379 + -0.4 2,432,379 + -0.1 2,432,379 + -1.9 2,432,379 + -0.1 2,432,379 + +0.3 2,432,379 + +0.4 2,432,379 + +0.7 2,432,380 - -0.6 2,432,380 - -0.5 2,432,380 - +0.2 2,432,380 - -0.5 2,432,380 - -0.3 2,432,429 - -0.2 2,432,434 - -0.5 2,432,458 + +0.1 2,432,477 + +0.2 2,432,477 + -0.4 2,432,478 - +0.5 2,432,594 - CA264_10490 0.28 -0.8 2,432,695 + CA264_10490 0.45 -1.1 2,432,698 - CA264_10490 0.45 +0.2 2,432,757 + CA264_10490 0.56 -0.5 2,432,822 + CA264_10490 0.67 -1.4 2,432,841 + CA264_10490 0.70 +0.1 2,432,842 - CA264_10490 0.70 -0.1 2,432,916 - CA264_10490 0.83 +2.0 2,432,951 + CA264_10490 0.89 -0.8 2,432,951 + CA264_10490 0.89 +0.3 2,432,952 - CA264_10490 0.89 -1.2 2,433,016 + +0.9 2,433,091 + +0.2 2,433,218 + CA264_10495 0.17 +0.1 2,433,219 - CA264_10495 0.17 -0.4 2,433,317 + CA264_10495 0.26 +0.2 2,433,318 - CA264_10495 0.26 +1.6 2,433,362 + CA264_10495 0.29 -0.0 2,433,362 + CA264_10495 0.29 +2.5 2,433,363 - CA264_10495 0.29 +0.1 2,433,363 - CA264_10495 0.29 -0.9 2,433,368 + CA264_10495 0.30 -1.2 2,433,368 + CA264_10495 0.30 +1.1 2,433,368 + CA264_10495 0.30 +0.3 2,433,369 - CA264_10495 0.30 +0.2 2,433,369 - CA264_10495 0.30 -0.7 2,433,448 + CA264_10495 0.37 -1.0 2,433,449 - CA264_10495 0.37 -1.0 2,433,485 + CA264_10495 0.40 +0.4 2,433,523 + CA264_10495 0.43 +0.9 2,433,527 - CA264_10495 0.43 +0.3 2,433,528 + CA264_10495 0.43 -0.6 2,433,528 + CA264_10495 0.43 +0.1 2,433,528 + CA264_10495 0.43 +0.3 2,433,529 - CA264_10495 0.43 +0.2 2,433,529 - CA264_10495 0.43 -0.8 2,433,529 - CA264_10495 0.43 -0.0 2,433,529 - CA264_10495 0.43 -0.4 2,433,535 + CA264_10495 0.44 +1.1 2,433,535 + CA264_10495 0.44 -0.4 2,433,641 + CA264_10495 0.53 -0.1 2,433,641 + CA264_10495 0.53 -0.8 2,433,641 + CA264_10495 0.53 -0.1 2,433,642 - CA264_10495 0.53 +1.1 2,433,733 + CA264_10495 0.60 -0.1 2,433,734 - CA264_10495 0.61 -0.3 2,433,752 - CA264_10495 0.62 +0.1 2,433,865 - CA264_10495 0.72 -0.2 2,433,965 + CA264_10495 0.80 -0.1 2,433,965 + CA264_10495 0.80 +0.2
Or see this region's nucleotide sequence