Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3613

Experiment: D-Trehalose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose (C)
4,286,078	-		Echvi_3612	0.40	+0.6
4,286,194	+		Echvi_3612	0.47	-1.1
4,286,194	+		Echvi_3612	0.47	-1.3
4,286,195	-		Echvi_3612	0.47	-0.9
4,286,257	-		Echvi_3612	0.51	+2.7
4,286,338	-		Echvi_3612	0.56	-0.9
4,286,359	+		Echvi_3612	0.57	-0.9
4,286,359	+		Echvi_3612	0.57	-1.0
4,286,371	+		Echvi_3612	0.58	-0.9
4,286,371	+		Echvi_3612	0.58	+1.2
4,286,565	+		Echvi_3612	0.70	+1.5
4,286,681	+		Echvi_3612	0.77	-1.7
4,286,688	-		Echvi_3612	0.77	-0.4
4,286,693	+		Echvi_3612	0.77	-1.3
4,286,693	+		Echvi_3612	0.77	-0.9
4,286,693	+		Echvi_3612	0.77	+1.1
4,286,693	+		Echvi_3612	0.77	-0.3
4,286,699	-		Echvi_3612	0.78	-1.0
4,286,756	+				+1.1
4,286,756	+		Echvi_3612	0.81	+1.0
4,287,005	-				-1.3
4,287,063	-				-0.3
4,287,087	+				-1.5
4,287,092	+				-0.7
4,287,092	+				-2.8
4,287,092	+				-0.0
4,287,093	-				+2.1
4,287,093	-				+1.1
4,287,093	-				+0.7
4,287,093	-				+0.9
4,287,093	-				+0.1
4,287,094	+				+1.3
4,287,094	+				+1.8
4,287,094	+				+0.4
4,287,095	-				+0.9
4,287,095	-				+0.1
4,287,095	-				-0.8
4,287,095	-				-0.5
4,287,095	-				-1.2
4,287,109	-				-0.9
4,287,159	+				+0.4
4,287,159	+				+0.8
4,287,160	-				+0.1
4,287,160	-				-0.4
4,287,160	-				-1.6
4,287,219	+		Echvi_3613	0.10	-0.3
4,287,219	+		Echvi_3613	0.10	-1.8
4,287,431	+		Echvi_3613	0.26	+1.1
4,287,431	+		Echvi_3613	0.26	-1.7
4,287,432	-		Echvi_3613	0.26	-0.4
4,287,432	-		Echvi_3613	0.26	+0.0
4,287,432	-		Echvi_3613	0.26	-1.6
4,287,525	-		Echvi_3613	0.33	-3.5
4,287,589	-		Echvi_3613	0.37	-0.7
4,287,716	+		Echvi_3613	0.46	-2.9
4,287,717	-		Echvi_3613	0.46	+0.2
4,287,746	-		Echvi_3613	0.49	-0.7
4,287,764	+		Echvi_3613	0.50	-1.1
4,287,765	-		Echvi_3613	0.50	-0.9
4,287,777	+		Echvi_3613	0.51	+1.0
4,287,777	+		Echvi_3613	0.51	+0.4
4,287,831	-		Echvi_3613	0.55	+0.0
4,287,864	+		Echvi_3613	0.57	-1.6
4,287,864	+		Echvi_3613	0.57	+4.4
4,287,864	+		Echvi_3613	0.57	-0.5
4,287,864	+		Echvi_3613	0.57	+0.1
4,287,864	+		Echvi_3613	0.57	+1.1
4,287,864	+		Echvi_3613	0.57	-0.7
4,287,864	+		Echvi_3613	0.57	-0.5
4,287,865	-		Echvi_3613	0.57	-1.5
4,287,865	-		Echvi_3613	0.57	+0.3
4,287,865	-		Echvi_3613	0.57	+3.7
4,287,865	-		Echvi_3613	0.57	-1.8
4,287,865	-		Echvi_3613	0.57	-2.5
4,287,868	+		Echvi_3613	0.57	+0.3
4,287,898	+		Echvi_3613	0.60	+0.8
4,287,919	+		Echvi_3613	0.61	-0.5
4,287,919	+		Echvi_3613	0.61	-0.1
4,287,920	-		Echvi_3613	0.61	-0.6
4,287,925	-		Echvi_3613	0.62	-0.6
4,287,944	+		Echvi_3613	0.63	+0.2
4,287,944	+		Echvi_3613	0.63	+1.5
4,287,946	+		Echvi_3613	0.63	+0.4
4,287,947	-		Echvi_3613	0.63	-2.8
4,287,983	+		Echvi_3613	0.66	-1.0
4,287,984	-		Echvi_3613	0.66	+0.8
4,287,985	+		Echvi_3613	0.66	+0.2
4,287,985	+		Echvi_3613	0.66	+0.1
4,287,985	+		Echvi_3613	0.66	+0.1
4,287,986	-		Echvi_3613	0.66	+0.2
4,287,998	+		Echvi_3613	0.67	-0.9
4,287,999	-		Echvi_3613	0.67	-0.4
4,288,013	+		Echvi_3613	0.68	-0.9
4,288,014	-		Echvi_3613	0.68	-0.3
4,288,014	-		Echvi_3613	0.68	-0.4
4,288,045	-		Echvi_3613	0.70	+0.8
4,288,091	+		Echvi_3613	0.74	+1.3
4,288,156	+		Echvi_3613	0.78	-1.3
4,288,163	-		Echvi_3613	0.79	+0.6
4,288,193	+		Echvi_3613	0.81	-0.2
4,288,193	+		Echvi_3613	0.81	-2.5
4,288,193	+		Echvi_3613	0.81	-1.5
4,288,193	+		Echvi_3613	0.81	-0.2
4,288,193	+		Echvi_3613	0.81	+0.5
4,288,194	-		Echvi_3613	0.81	-0.6
4,288,198	-		Echvi_3613	0.81	-1.0
4,288,205	-		Echvi_3613	0.82	-0.5
4,288,205	-		Echvi_3613	0.82	-0.9
4,288,206	+		Echvi_3613	0.82	-0.2
4,288,207	-		Echvi_3613	0.82	+0.4
4,288,207	-		Echvi_3613	0.82	+0.5
4,288,207	-		Echvi_3613	0.82	+0.1
4,288,207	-		Echvi_3613	0.82	+1.5
4,288,207	-		Echvi_3613	0.82	+0.7
4,288,207	-		Echvi_3613	0.82	-0.0
4,288,254	+		Echvi_3613	0.85	-0.2
4,288,254	+		Echvi_3613	0.85	-0.8
4,288,262	+		Echvi_3613	0.86	-1.7
4,288,262	+		Echvi_3613	0.86	+1.3
4,288,345	-				+2.1
4,288,345	-				+0.5
4,288,399	+				+0.1
4,288,658	+		Echvi_3614	0.13	+0.5
4,288,738	+		Echvi_3614	0.19	-2.0
4,288,738	+		Echvi_3614	0.19	-1.9
4,288,738	+		Echvi_3614	0.19	+0.0
4,288,739	-		Echvi_3614	0.19	-0.0
4,288,739	-		Echvi_3614	0.19	-3.0
4,288,739	-		Echvi_3614	0.19	-1.5
4,288,785	-		Echvi_3614	0.23	+1.7
4,288,790	+		Echvi_3614	0.23	-1.1
4,288,845	+		Echvi_3614	0.27	+0.2
4,288,846	-		Echvi_3614	0.27	-0.5
4,288,880	+		Echvi_3614	0.30	-0.1
4,288,902	-		Echvi_3614	0.32	+0.5
4,288,973	+		Echvi_3614	0.37	+1.4
4,288,973	+		Echvi_3614	0.37	-1.5
4,288,973	+		Echvi_3614	0.37	-0.3
4,288,974	-		Echvi_3614	0.37	-0.2
4,288,983	+		Echvi_3614	0.38	-2.5
4,289,000	-		Echvi_3614	0.39	-0.9
4,289,000	-		Echvi_3614	0.39	-0.5
4,289,144	-		Echvi_3614	0.50	-0.7
4,289,144	-		Echvi_3614	0.50	-0.2
4,289,179	+		Echvi_3614	0.53	-0.1
4,289,179	+		Echvi_3614	0.53	+0.5
4,289,179	+		Echvi_3614	0.53	-0.3
4,289,179	+		Echvi_3614	0.53	-0.1
4,289,179	+		Echvi_3614	0.53	+2.3
4,289,180	-		Echvi_3614	0.53	+0.0
4,289,180	-		Echvi_3614	0.53	-1.2
4,289,377	-		Echvi_3614	0.68	-1.3
4,289,396	+		Echvi_3614	0.70	-1.0
4,289,431	+		Echvi_3614	0.72	-1.2