Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3326

Experiment: D-Trehalose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose (C)
3,928,720	-				+1.1
3,928,765	+				+0.5
3,928,795	+				-2.2
3,928,795	+				-1.2
3,928,796	-				+0.0
3,928,843	+				+0.4
3,928,844	-				-1.4
3,928,882	-				-0.5
3,928,908	+		Echvi_3324	0.11	+0.5
3,929,105	-				+0.8
3,929,123	-				-0.8
3,929,146	-				-0.0
3,929,193	-				-1.6
3,929,229	+				-0.5
3,929,260	+				-1.4
3,929,280	+				-0.0
3,929,373	+		Echvi_3325	0.37	-1.3
3,929,397	+		Echvi_3325	0.48	-2.2
3,929,415	-		Echvi_3325	0.56	-0.7
3,929,428	-		Echvi_3325	0.62	-1.1
3,929,432	+		Echvi_3325	0.64	-1.8
3,929,433	-		Echvi_3325	0.64	+1.1
3,929,433	-		Echvi_3325	0.64	-0.2
3,929,504	+				-0.5
3,929,523	+				-0.0
3,929,537	-				+0.4
3,929,537	-				+0.4
3,929,545	+				+0.1
3,929,546	-				-1.6
3,929,546	-				-0.5
3,929,617	+				-2.8
3,929,623	+				+0.5
3,929,623	+				+0.3
3,929,626	-				-0.8
3,929,666	+				+0.9
3,929,667	-				+3.1
3,929,686	+				-0.6
3,929,687	-				-0.5
3,929,687	-				-1.4
3,929,774	+				-0.4
3,929,896	-		Echvi_3326	0.20	+1.4
3,929,896	-		Echvi_3326	0.20	-0.2
3,929,933	-		Echvi_3326	0.24	-0.9
3,929,933	-		Echvi_3326	0.24	-1.6
3,929,940	-		Echvi_3326	0.24	+0.4
3,929,981	+		Echvi_3326	0.29	+1.6
3,929,982	-		Echvi_3326	0.29	-2.1
3,929,982	-		Echvi_3326	0.29	+0.5
3,930,030	-		Echvi_3326	0.34	-0.1
3,930,034	-		Echvi_3326	0.34	-0.8
3,930,086	+		Echvi_3326	0.40	-0.6
3,930,086	+		Echvi_3326	0.40	+1.3
3,930,087	-		Echvi_3326	0.40	+0.8
3,930,087	-		Echvi_3326	0.40	-1.3
3,930,161	+		Echvi_3326	0.48	-2.9
3,930,196	+		Echvi_3326	0.51	-0.1
3,930,196	+		Echvi_3326	0.51	-0.7
3,930,197	-		Echvi_3326	0.51	-0.6
3,930,248	+		Echvi_3326	0.57	+0.5
3,930,272	+		Echvi_3326	0.59	-0.0
3,930,272	+		Echvi_3326	0.59	+1.8
3,930,272	+		Echvi_3326	0.59	-1.2
3,930,272	+		Echvi_3326	0.59	+0.6
3,930,272	+		Echvi_3326	0.59	-2.4
3,930,272	+		Echvi_3326	0.59	+1.8
3,930,357	+		Echvi_3326	0.68	-3.3
3,930,440	+		Echvi_3326	0.77	+0.1
3,930,445	+		Echvi_3326	0.77	+0.3
3,930,445	+		Echvi_3326	0.77	+0.0
3,930,689	+				+0.2
3,930,701	+				+0.6
3,930,717	+				-0.9
3,930,717	+				+0.8
3,930,717	+				-0.3
3,930,719	+				-0.5
3,930,720	-				-0.9
3,930,724	+				-1.0
3,930,731	+				-0.2
3,930,734	+				-0.6
3,930,734	+				+1.1
3,930,734	+				-1.7
3,930,760	-				+0.3
3,930,789	+				-0.3
3,930,789	+				-2.0
3,930,789	+				+1.0
3,930,925	+		Echvi_3327	0.21	+1.2
3,930,934	-		Echvi_3327	0.22	+0.1
3,930,944	+		Echvi_3327	0.23	+1.1
3,930,944	+		Echvi_3327	0.23	+2.1
3,930,992	+		Echvi_3327	0.28	-1.4
3,930,992	+		Echvi_3327	0.28	-1.6
3,930,992	+		Echvi_3327	0.28	+0.5
3,930,993	-		Echvi_3327	0.28	+0.7
3,930,993	-		Echvi_3327	0.28	+1.4
3,930,993	-		Echvi_3327	0.28	+1.5
3,931,071	-		Echvi_3327	0.36	-1.7
3,931,104	+		Echvi_3327	0.39	+1.4
3,931,104	+		Echvi_3327	0.39	+0.5
3,931,104	+		Echvi_3327	0.39	-1.3
3,931,104	+		Echvi_3327	0.39	+0.6
3,931,104	+		Echvi_3327	0.39	-0.8
3,931,104	+		Echvi_3327	0.39	-1.0
3,931,105	-		Echvi_3327	0.39	+0.5
3,931,105	-		Echvi_3327	0.39	+0.1
3,931,160	+		Echvi_3327	0.44	-1.3
3,931,161	-		Echvi_3327	0.44	-0.4
3,931,161	-		Echvi_3327	0.44	-0.3
3,931,161	-		Echvi_3327	0.44	-2.0
3,931,161	-		Echvi_3327	0.44	-0.3
3,931,217	-		Echvi_3327	0.50	+3.0
3,931,219	+		Echvi_3327	0.50	-0.5
3,931,220	-		Echvi_3327	0.50	-1.4
3,931,220	-		Echvi_3327	0.50	-1.7
3,931,220	-		Echvi_3327	0.50	+0.4
3,931,247	+		Echvi_3327	0.53	-1.2
3,931,247	+		Echvi_3327	0.53	-0.7
3,931,260	+		Echvi_3327	0.54	-0.2
3,931,267	-		Echvi_3327	0.55	+0.7
3,931,289	-		Echvi_3327	0.57	-0.2
3,931,289	-		Echvi_3327	0.57	-0.7
3,931,300	+		Echvi_3327	0.58	+0.6
3,931,300	+		Echvi_3327	0.58	-0.3
3,931,301	-		Echvi_3327	0.58	+2.0
3,931,307	-		Echvi_3327	0.59	-0.7
3,931,313	+		Echvi_3327	0.59	-2.6
3,931,314	-		Echvi_3327	0.59	-0.0
3,931,337	-		Echvi_3327	0.62	+3.2
3,931,381	-		Echvi_3327	0.66	-1.5
3,931,382	+		Echvi_3327	0.66	-0.2
3,931,383	-		Echvi_3327	0.66	-0.5
3,931,383	-		Echvi_3327	0.66	-0.2
3,931,449	+		Echvi_3327	0.72	+0.5
3,931,449	+				+1.5
3,931,450	-		Echvi_3327	0.73	+0.6
3,931,458	+		Echvi_3327	0.73	+0.7
3,931,467	+		Echvi_3327	0.74	+0.3
3,931,467	+		Echvi_3327	0.74	-0.7
3,931,467	+		Echvi_3327	0.74	+0.5
3,931,467	+		Echvi_3327	0.74	+0.1
3,931,467	+		Echvi_3327	0.74	-1.0
3,931,467	+		Echvi_3327	0.74	+0.7
3,931,467	+		Echvi_3327	0.74	-1.5
3,931,471	+		Echvi_3327	0.75	-0.3
3,931,471	+		Echvi_3327	0.75	-0.3
3,931,472	-		Echvi_3327	0.75	-1.2
3,931,472	-		Echvi_3327	0.75	+1.1
3,931,472	-		Echvi_3327	0.75	-1.3
3,931,477	+		Echvi_3327	0.75	+0.4
3,931,525	+		Echvi_3327	0.80	-0.6
3,931,526	-		Echvi_3327	0.80	+1.0
3,931,526	-		Echvi_3327	0.80	+0.2
3,931,566	+		Echvi_3327	0.84	+0.5
3,931,579	-		Echvi_3327	0.85	-0.1
3,931,606	+		Echvi_3327	0.88	+2.4
3,931,606	+		Echvi_3327	0.88	-0.9
3,931,608	+		Echvi_3327	0.88	+0.7
3,931,608	+		Echvi_3327	0.88	-2.2
3,931,608	+		Echvi_3327	0.88	-1.8
3,931,608	+		Echvi_3327	0.88	+2.3
3,931,608	+		Echvi_3327	0.88	-0.6
3,931,609	-		Echvi_3327	0.88	-0.4
3,931,609	-		Echvi_3327	0.88	+0.2
3,931,609	-		Echvi_3327	0.88	-2.0