Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2805

Experiment: D-Trehalose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose (C)
3,350,293	+				+0.1
3,350,293	+				+0.7
3,350,293	+				-2.8
3,350,294	-				-0.2
3,350,294	-				+0.9
3,350,294	-				+0.3
3,350,294	-				+1.7
3,350,295	+				+0.8
3,350,295	+				-2.0
3,350,295	+				-0.2
3,350,296	-				-2.4
3,350,296	-				-0.0
3,350,298	-				+2.3
3,350,298	-				+0.0
3,350,298	-				-2.7
3,350,298	-				+1.4
3,350,327	-				-0.7
3,350,347	-				-0.5
3,350,357	-				+0.1
3,350,357	-				+0.0
3,350,357	-				+1.1
3,350,371	+				+0.6
3,350,371	+				+0.5
3,350,417	+				-1.0
3,350,488	+		Echvi_2804	0.16	+0.1
3,350,531	+		Echvi_2804	0.21	-0.8
3,350,532	-		Echvi_2804	0.21	-2.4
3,350,532	-		Echvi_2804	0.21	+1.4
3,350,532	-		Echvi_2804	0.21	-0.4
3,350,532	-		Echvi_2804	0.21	+0.1
3,350,577	+		Echvi_2804	0.26	-0.3
3,350,577	+		Echvi_2804	0.26	+1.1
3,350,577	+		Echvi_2804	0.26	+1.1
3,350,577	+		Echvi_2804	0.26	+1.1
3,350,581	+		Echvi_2804	0.27	+1.1
3,350,615	+		Echvi_2804	0.30	-1.6
3,350,615	+		Echvi_2804	0.30	-1.4
3,350,639	+		Echvi_2804	0.33	+2.7
3,350,668	+		Echvi_2804	0.36	-1.2
3,350,669	-		Echvi_2804	0.36	-1.3
3,350,672	+		Echvi_2804	0.37	-2.2
3,350,834	-		Echvi_2804	0.55	-0.9
3,350,873	+		Echvi_2804	0.59	-0.8
3,350,926	+		Echvi_2804	0.65	+0.6
3,350,993	+		Echvi_2804	0.73	+0.3
3,350,994	-		Echvi_2804	0.73	-0.2
3,351,041	-		Echvi_2804	0.78	-2.6
3,351,095	+		Echvi_2804	0.84	-2.1
3,351,106	+		Echvi_2804	0.86	-0.8
3,351,107	-		Echvi_2804	0.86	+0.6
3,351,134	+		Echvi_2804	0.89	+0.1
3,351,134	+		Echvi_2804	0.89	+0.1
3,351,135	-		Echvi_2804	0.89	+0.6
3,351,234	+				+1.2
3,351,270	+				-1.9
3,351,271	-				-0.2
3,351,299	+				-1.3
3,351,300	-				+0.5
3,351,300	-				+2.4
3,351,368	+				-0.2
3,351,368	+				+0.4
3,351,408	-				-0.2
3,351,410	-				-0.1
3,351,446	+		Echvi_2805	0.12	+0.8
3,351,470	+		Echvi_2805	0.14	-2.6
3,351,528	-		Echvi_2805	0.18	-1.9
3,351,538	+		Echvi_2805	0.19	+0.6
3,351,539	-		Echvi_2805	0.19	-0.5
3,351,593	+		Echvi_2805	0.23	-2.7
3,351,654	-		Echvi_2805	0.27	-1.6
3,351,654	-		Echvi_2805	0.27	-0.1
3,351,667	+		Echvi_2805	0.28	+1.1
3,351,670	-		Echvi_2805	0.29	-1.6
3,351,724	-		Echvi_2805	0.33	-0.4
3,351,748	+		Echvi_2805	0.34	+0.9
3,351,767	+		Echvi_2805	0.36	-2.8
3,351,767	+		Echvi_2805	0.36	+1.0
3,351,768	-		Echvi_2805	0.36	-0.7
3,351,768	-		Echvi_2805	0.36	-0.6
3,351,832	-		Echvi_2805	0.41	+0.1
3,352,031	+		Echvi_2805	0.55	-1.7
3,352,032	-		Echvi_2805	0.56	-1.0
3,352,039	+		Echvi_2805	0.56	-1.0
3,352,040	-		Echvi_2805	0.56	-0.7
3,352,093	+		Echvi_2805	0.60	+0.3
3,352,093	+		Echvi_2805	0.60	-1.1
3,352,093	+		Echvi_2805	0.60	-0.8
3,352,093	+		Echvi_2805	0.60	-1.2
3,352,094	-		Echvi_2805	0.60	-1.0
3,352,095	+		Echvi_2805	0.60	-1.2
3,352,095	+		Echvi_2805	0.60	+0.8
3,352,096	-		Echvi_2805	0.60	-2.1
3,352,097	+		Echvi_2805	0.60	+2.3
3,352,183	-		Echvi_2805	0.67	-0.6
3,352,190	+		Echvi_2805	0.67	-0.2
3,352,191	-		Echvi_2805	0.67	+0.1
3,352,191	-		Echvi_2805	0.67	-2.9
3,352,269	+		Echvi_2805	0.73	+0.1
3,352,269	+		Echvi_2805	0.73	+0.2
3,352,269	+		Echvi_2805	0.73	-1.9
3,352,269	+		Echvi_2805	0.73	+0.9
3,352,270	-		Echvi_2805	0.73	+0.6
3,352,338	+		Echvi_2805	0.78	-1.1
3,352,341	-		Echvi_2805	0.78	-1.2
3,352,380	+		Echvi_2805	0.81	-3.0
3,352,380	+		Echvi_2805	0.81	+0.4
3,352,381	-		Echvi_2805	0.81	-1.0
3,352,381	-		Echvi_2805	0.81	-0.8
3,352,385	+		Echvi_2805	0.82	-1.3
3,352,507	+				+0.9
3,352,508	-				-0.5
3,352,508	-				-0.5
3,352,508	-				-0.0
3,352,529	-				-1.6
3,352,614	+				-3.2
3,352,621	+				-2.4
3,352,634	-				+0.4
3,352,641	+				-1.8
3,352,641	+				-0.2
3,352,642	-				-0.0
3,352,677	+				-1.2
3,352,693	+				+0.8
3,352,726	-				+1.5
3,352,752	-				-1.5
3,352,804	-				-1.6
3,352,865	+				-0.6
3,352,884	+		Echvi_2806	0.10	+0.1
3,352,884	+		Echvi_2806	0.10	-1.3
3,352,888	+		Echvi_2806	0.11	-0.4
3,352,888	+		Echvi_2806	0.11	+0.2
3,352,888	+		Echvi_2806	0.11	+1.8
3,352,889	-		Echvi_2806	0.11	+1.3
3,352,889	-		Echvi_2806	0.11	+1.6
3,352,889	-		Echvi_2806	0.11	-3.1
3,352,918	+		Echvi_2806	0.13	+0.6
3,352,918	+		Echvi_2806	0.13	-0.1
3,352,919	-		Echvi_2806	0.13	-2.1
3,352,927	+		Echvi_2806	0.13	-1.2
3,353,008	+		Echvi_2806	0.19	+0.6
3,353,008	+		Echvi_2806	0.19	-0.7
3,353,090	+		Echvi_2806	0.24	+1.8
3,353,145	-		Echvi_2806	0.28	-0.4
3,353,145	-		Echvi_2806	0.28	-0.8
3,353,263	+		Echvi_2806	0.36	+0.1
3,353,263	+		Echvi_2806	0.36	+0.1
3,353,269	-		Echvi_2806	0.36	-1.9
3,353,291	+		Echvi_2806	0.37	-0.5
3,353,297	+		Echvi_2806	0.38	-1.2
3,353,305	+		Echvi_2806	0.38	+0.4
3,353,305	+		Echvi_2806	0.38	+1.6
3,353,305	+		Echvi_2806	0.38	-2.6
3,353,305	+		Echvi_2806	0.38	+1.8
3,353,306	-		Echvi_2806	0.38	+0.6
3,353,306	-		Echvi_2806	0.38	+0.5
3,353,306	-		Echvi_2806	0.38	-1.6
3,353,337	-		Echvi_2806	0.41	+0.8
3,353,347	-		Echvi_2806	0.41	-1.7
3,353,395	+		Echvi_2806	0.44	+0.6
3,353,427	+		Echvi_2806	0.47	-1.0
3,353,428	-		Echvi_2806	0.47	-0.4
3,353,477	+		Echvi_2806	0.50	-2.8
3,353,478	-		Echvi_2806	0.50	-0.3
3,353,478	-		Echvi_2806	0.50	+0.6
3,353,537	+		Echvi_2806	0.54	+2.1