Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1849

Experiment: D-Trehalose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose (C)
2,164,133	+		Echvi_1847	0.79	-0.8
2,164,133	+		Echvi_1847	0.79	-0.5
2,164,133	+		Echvi_1847	0.79	-2.0
2,164,133	+		Echvi_1847	0.79	-1.4
2,164,133	+				+2.4
2,164,133	+		Echvi_1847	0.79	-1.6
2,164,134	-		Echvi_1847	0.79	-2.6
2,164,134	-		Echvi_1847	0.79	-3.0
2,164,134	-		Echvi_1847	0.79	-1.3
2,164,134	-		Echvi_1847	0.79	-2.4
2,164,134	-		Echvi_1847	0.79	-3.1
2,164,134	-		Echvi_1847	0.79	-2.0
2,164,134	-		Echvi_1847	0.79	-1.8
2,164,184	-		Echvi_1847	0.82	-3.5
2,164,243	+		Echvi_1847	0.85	-1.5
2,164,243	+		Echvi_1847	0.85	-1.6
2,164,244	-		Echvi_1847	0.85	-2.5
2,164,244	-		Echvi_1847	0.85	-2.2
2,164,248	-		Echvi_1847	0.86	-2.0
2,164,261	+		Echvi_1847	0.86	-3.5
2,164,261	+		Echvi_1847	0.86	-2.9
2,164,262	-		Echvi_1847	0.86	-2.8
2,164,262	-		Echvi_1847	0.86	-0.6
2,164,347	+				+0.0
2,164,347	+				-3.9
2,164,348	-				-2.3
2,164,348	-				-0.5
2,164,348	-				-3.3
2,164,425	-				-2.9
2,164,425	-				-1.9
2,164,426	+				-3.2
2,164,427	-				-0.5
2,164,503	+				-1.0
2,164,503	+				-3.0
2,164,504	-				-0.5
2,164,504	-				-3.2
2,164,569	+		Echvi_1848	0.11	-2.2
2,164,569	+		Echvi_1848	0.11	-3.0
2,164,569	+		Echvi_1848	0.11	-3.7
2,164,597	+		Echvi_1848	0.16	-3.0
2,164,597	+		Echvi_1848	0.16	-1.8
2,164,597	+		Echvi_1848	0.16	-2.5
2,164,676	-		Echvi_1848	0.30	-3.9
2,164,676	-		Echvi_1848	0.30	-2.4
2,164,676	-		Echvi_1848	0.30	-2.5
2,164,676	-		Echvi_1848	0.30	-2.2
2,164,681	+		Echvi_1848	0.31	-2.3
2,164,682	-		Echvi_1848	0.32	-2.9
2,164,684	+		Echvi_1848	0.32	-2.8
2,164,684	+		Echvi_1848	0.32	-2.2
2,164,684	+		Echvi_1848	0.32	-1.7
2,164,726	+		Echvi_1848	0.39	-2.7
2,164,726	+		Echvi_1848	0.39	-2.9
2,164,726	+		Echvi_1848	0.39	-2.9
2,164,727	-		Echvi_1848	0.40	-1.2
2,164,727	-		Echvi_1848	0.40	-5.1
2,164,731	+		Echvi_1848	0.40	-1.3
2,164,732	-		Echvi_1848	0.41	-2.2
2,164,747	+		Echvi_1848	0.43	-3.4
2,164,751	+		Echvi_1848	0.44	-1.8
2,164,752	-		Echvi_1848	0.44	-4.0
2,164,778	-		Echvi_1848	0.49	-4.8
2,164,778	-		Echvi_1848	0.49	-2.8
2,164,810	+		Echvi_1848	0.55	-1.1
2,164,866	-		Echvi_1848	0.65	-1.1
2,164,873	+		Echvi_1848	0.66	-3.1
2,164,874	-		Echvi_1848	0.66	-2.2
2,164,909	+		Echvi_1848	0.73	-1.8
2,164,910	-		Echvi_1848	0.73	-2.4
2,164,910	-		Echvi_1848	0.73	+0.0
2,164,910	-		Echvi_1848	0.73	-1.8
2,164,910	-		Echvi_1848	0.73	+0.0
2,164,910	-		Echvi_1848	0.73	+0.0
2,164,914	-		Echvi_1848	0.74	-1.3
2,164,914	-		Echvi_1848	0.74	-3.1
2,164,954	+		Echvi_1848	0.81	-1.0
2,164,954	+		Echvi_1848	0.81	-1.1
2,164,955	-		Echvi_1848	0.81	-0.2
2,165,020	+				-2.9
2,165,021	-				-1.9
2,165,022	+				-1.3
2,165,023	-				-1.6
2,165,023	-				-0.2
2,165,023	-				-1.8
2,165,023	-				-1.6
2,165,023	-				-0.5
2,165,028	-				-1.9
2,165,028	-				-1.6
2,165,101	+				-0.9
2,165,109	+				-0.8
2,165,109	+				-0.9
2,165,124	-				-0.0
2,165,126	+				+1.4
2,165,168	+				+2.0
2,165,288	-		Echvi_1849	0.18	-1.0
2,165,312	+		Echvi_1849	0.20	+0.8
2,165,313	-		Echvi_1849	0.20	-0.4
2,165,313	-		Echvi_1849	0.20	+0.5
2,165,313	-		Echvi_1849	0.20	-0.8
2,165,313	-		Echvi_1849	0.20	+1.1
2,165,362	-		Echvi_1849	0.26	+0.8
2,165,362	-		Echvi_1849	0.26	-0.4
2,165,391	-		Echvi_1849	0.29	+0.0
2,165,391	-		Echvi_1849	0.29	+1.1
2,165,525	+				+2.9
2,165,532	+		Echvi_1849	0.45	+0.3
2,165,547	+		Echvi_1849	0.46	-2.6
2,165,547	+		Echvi_1849	0.46	-2.0
2,165,551	+		Echvi_1849	0.47	+0.1
2,165,600	+		Echvi_1849	0.52	+1.6
2,165,603	+		Echvi_1849	0.52	-1.2
2,165,604	-		Echvi_1849	0.52	-1.2
2,165,604	-		Echvi_1849	0.52	+1.0
2,165,604	-		Echvi_1849	0.52	-0.3
2,165,608	+		Echvi_1849	0.53	+0.3
2,165,608	+		Echvi_1849	0.53	+0.0
2,165,663	+		Echvi_1849	0.59	-1.1
2,165,664	-		Echvi_1849	0.59	-2.0
2,165,664	-		Echvi_1849	0.59	+0.4
2,165,664	-		Echvi_1849	0.59	-1.8
2,165,748	-		Echvi_1849	0.68	+0.0
2,165,751	+		Echvi_1849	0.69	+0.0
2,165,788	-		Echvi_1849	0.73	+0.4
2,165,864	+		Echvi_1849	0.81	+1.6
2,165,864	+		Echvi_1849	0.81	+0.7
2,165,864	+		Echvi_1849	0.81	-1.6
2,165,865	-		Echvi_1849	0.81	-0.6
2,165,865	-		Echvi_1849	0.81	-0.7
2,165,895	-		Echvi_1849	0.84	+1.1
2,165,895	-		Echvi_1849	0.84	+0.0
2,165,901	+		Echvi_1849	0.85	+0.8
2,165,901	+		Echvi_1849	0.85	-1.2
2,165,915	-		Echvi_1849	0.87	-1.1
2,165,948	+				-2.1
2,165,948	+				+2.4
2,165,949	-				+1.5
2,165,949	-				+0.1
2,166,013	-				+0.6
2,166,013	-				+0.4
2,166,025	+				+1.3
2,166,026	-				+0.6
2,166,031	+				+0.5
2,166,031	+				+0.4
2,166,043	+				-0.9
2,166,044	-				-0.8
2,166,044	-				+0.1
2,166,099	-				-0.6
2,166,099	-				-0.5
2,166,103	-				+1.2
2,166,103	-				+0.4
2,166,106	+				+0.8
2,166,115	+				+0.5
2,166,115	+				+0.1
2,166,116	-				-2.4
2,166,174	-				-0.3
2,166,186	+				-0.0
2,166,236	-				+0.3
2,166,236	-				-0.9
2,166,244	+				-2.0
2,166,245	-				+1.0
2,166,260	+				+0.4
2,166,286	-				-0.9
2,166,288	+				+0.0
2,166,294	+				-0.5
2,166,332	+				-2.7
2,166,332	+				+0.1
2,166,332	+				+0.0
2,166,333	-				-1.3
2,166,333	-				+0.2
2,166,333	-				+1.9
2,166,334	+				-1.1
2,166,335	-				+0.5
2,166,381	+				+3.4
2,166,448	-				+1.6
2,166,507	+				-0.9
2,166,507	+				-0.6
2,166,508	-				-0.5
2,166,538	+				-0.5
2,166,539	-				+1.7
2,166,594	+				-0.3
2,166,594	+				-0.7
2,166,673	-		Echvi_1850	0.19	-0.5
2,166,706	+		Echvi_1850	0.24	-0.8
2,166,747	+		Echvi_1850	0.29	-1.9
2,166,747	+		Echvi_1850	0.29	-1.1
2,166,748	-		Echvi_1850	0.29	-1.8
2,166,748	-		Echvi_1850	0.29	+1.1
2,166,762	+		Echvi_1850	0.31	-2.7
2,166,786	-		Echvi_1850	0.35	+0.1
2,166,876	-		Echvi_1850	0.47	+0.8
2,166,892	-		Echvi_1850	0.49	-1.3
2,166,960	+		Echvi_1850	0.59	+0.5
2,167,007	+		Echvi_1850	0.65	-2.2
2,167,008	-		Echvi_1850	0.65	+1.9
2,167,008	-		Echvi_1850	0.65	-1.0
2,167,010	-		Echvi_1850	0.65	-1.0
2,167,026	-		Echvi_1850	0.68	+0.2
2,167,026	-		Echvi_1850	0.68	-0.5
2,167,026	-		Echvi_1850	0.68	-0.2
2,167,026	-		Echvi_1850	0.68	-0.1