Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1617

Experiment: D-Trehalose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose (C)
1,859,395	+		Echvi_1615	0.25	+1.8
1,859,395	+		Echvi_1615	0.25	+1.7
1,859,427	+		Echvi_1615	0.29	-0.6
1,859,625	-		Echvi_1615	0.50	-1.2
1,859,770	+		Echvi_1615	0.66	+0.4
1,859,773	-		Echvi_1615	0.66	+0.4
1,859,799	-		Echvi_1615	0.69	-1.6
1,859,833	+		Echvi_1615	0.73	+1.5
1,859,833	+		Echvi_1615	0.73	+0.2
1,859,835	+		Echvi_1615	0.73	+0.4
1,859,835	+		Echvi_1615	0.73	+0.2
1,859,964	-		Echvi_1615	0.87	+0.2
1,860,046	+				-1.0
1,860,095	-				+0.3
1,860,095	-				-0.2
1,860,110	+				-1.2
1,860,110	+				+1.9
1,860,111	-				-0.8
1,860,130	+				+0.4
1,860,180	-		Echvi_1616	0.27	+0.4
1,860,198	+		Echvi_1616	0.37	+1.0
1,860,198	+		Echvi_1616	0.37	+1.2
1,860,198	+		Echvi_1616	0.37	+0.7
1,860,199	-		Echvi_1616	0.38	+0.5
1,860,200	+		Echvi_1616	0.38	-0.6
1,860,264	+		Echvi_1616	0.73	-0.8
1,860,264	+		Echvi_1616	0.73	-1.4
1,860,271	-		Echvi_1616	0.76	+0.5
1,860,291	+		Echvi_1616	0.87	+0.5
1,860,294	+		Echvi_1616	0.89	-0.0
1,860,300	-				-1.3
1,860,415	+				+1.6
1,860,415	+				-1.0
1,860,416	-				-0.6
1,860,536	+		Echvi_1617	0.14	-0.1
1,860,566	+		Echvi_1617	0.17	-0.1
1,860,663	+		Echvi_1617	0.23	+0.5
1,860,664	-		Echvi_1617	0.23	-0.8
1,860,783	+		Echvi_1617	0.32	-1.7
1,860,783	+		Echvi_1617	0.32	+1.3
1,860,784	-		Echvi_1617	0.32	-1.7
1,860,784	-		Echvi_1617	0.32	-0.5
1,860,860	+		Echvi_1617	0.37	-2.9
1,860,915	+		Echvi_1617	0.41	+0.8
1,860,915	+		Echvi_1617	0.41	-0.6
1,860,915	+		Echvi_1617	0.41	+0.6
1,860,943	+		Echvi_1617	0.43	-0.9
1,860,943	+		Echvi_1617	0.43	+1.4
1,860,943	+		Echvi_1617	0.43	-1.2
1,860,944	-		Echvi_1617	0.43	-0.6
1,861,001	-		Echvi_1617	0.47	-1.8
1,861,005	+		Echvi_1617	0.47	+0.8
1,861,046	+		Echvi_1617	0.50	+0.3
1,861,046	+		Echvi_1617	0.50	-1.2
1,861,046	+		Echvi_1617	0.50	-0.2
1,861,229	+		Echvi_1617	0.63	-0.8
1,861,230	-		Echvi_1617	0.63	-0.0
1,861,304	+		Echvi_1617	0.68	-1.1
1,861,442	+		Echvi_1617	0.77	+0.7
1,861,442	+		Echvi_1617	0.77	-2.2
1,861,443	-		Echvi_1617	0.77	+1.3
1,861,443	-		Echvi_1617	0.77	-0.7
1,861,445	-		Echvi_1617	0.77	-1.1
1,861,445	-		Echvi_1617	0.77	-1.5
1,861,614	+		Echvi_1617	0.89	-2.0
1,861,720	+				+2.8
1,861,776	-				-1.2
1,861,776	-				-1.0
1,861,838	+				-0.8
1,861,853	+				-1.0
1,861,865	-				+1.3
1,861,865	-				+1.7
1,861,865	-				+1.2
1,861,868	+				+3.0
1,861,869	-				+0.8
1,861,889	+				-1.8
1,861,931	+				-0.7
1,861,932	-				+0.5
1,861,933	+				-0.4
1,861,933	+				+0.1
1,861,933	+				+0.4
1,861,933	+				+1.6
1,861,933	+				+0.3
1,861,934	-				-0.8
1,861,934	-				-0.0
1,862,014	+		Echvi_1618	0.14	-2.0
1,862,028	+		Echvi_1618	0.16	+2.0
1,862,043	+		Echvi_1618	0.17	+0.4
1,862,043	+		Echvi_1618	0.17	-1.3
1,862,043	+		Echvi_1618	0.17	-0.6
1,862,043	+		Echvi_1618	0.17	-1.7
1,862,044	-		Echvi_1618	0.17	+0.8
1,862,105	+		Echvi_1618	0.23	+0.9
1,862,107	+		Echvi_1618	0.23	+0.0
1,862,108	-		Echvi_1618	0.23	+0.1
1,862,108	-		Echvi_1618	0.23	+2.8
1,862,108	-		Echvi_1618	0.23	-0.3
1,862,108	-		Echvi_1618	0.23	+0.7
1,862,140	+		Echvi_1618	0.26	+1.0
1,862,173	+		Echvi_1618	0.30	+0.9
1,862,225	-		Echvi_1618	0.34	-1.3
1,862,225	-		Echvi_1618	0.34	+0.2
1,862,225	-		Echvi_1618	0.34	+1.6
1,862,247	+		Echvi_1618	0.37	-1.2
1,862,247	+		Echvi_1618	0.37	+0.8
1,862,248	-		Echvi_1618	0.37	-0.1
1,862,253	+		Echvi_1618	0.37	-0.3
1,862,258	+		Echvi_1618	0.38	+0.2
1,862,258	+		Echvi_1618	0.38	+1.1
1,862,300	+		Echvi_1618	0.42	-1.2
1,862,302	+		Echvi_1618	0.42	+1.2
1,862,302	+		Echvi_1618	0.42	-1.2
1,862,302	+		Echvi_1618	0.42	-1.3
1,862,303	-		Echvi_1618	0.42	+0.8
1,862,303	-		Echvi_1618	0.42	-1.5
1,862,316	-		Echvi_1618	0.43	-1.5
1,862,330	+		Echvi_1618	0.44	+0.2
1,862,330	+		Echvi_1618	0.44	-0.8
1,862,330	+		Echvi_1618	0.44	-1.5
1,862,331	-		Echvi_1618	0.45	+0.6
1,862,337	+		Echvi_1618	0.45	-0.2
1,862,338	-		Echvi_1618	0.45	+1.9
1,862,362	+		Echvi_1618	0.48	+1.1
1,862,362	+		Echvi_1618	0.48	+2.0
1,862,362	+		Echvi_1618	0.48	-2.2
1,862,362	+		Echvi_1618	0.48	-0.6
1,862,362	+		Echvi_1618	0.48	-2.7
1,862,363	-		Echvi_1618	0.48	+1.0
1,862,363	-		Echvi_1618	0.48	-0.5
1,862,363	-		Echvi_1618	0.48	-0.7
1,862,363	-		Echvi_1618	0.48	-1.4
1,862,363	-		Echvi_1618	0.48	-1.7
1,862,363	-		Echvi_1618	0.48	+1.4
1,862,363	-		Echvi_1618	0.48	-1.0
1,862,428	+		Echvi_1618	0.54	-1.4
1,862,429	-		Echvi_1618	0.54	-2.0
1,862,435	+		Echvi_1618	0.54	-0.8
1,862,436	-		Echvi_1618	0.55	-0.1
1,862,442	+		Echvi_1618	0.55	-0.5
1,862,442	+		Echvi_1618	0.55	+4.0
1,862,442	+		Echvi_1618	0.55	-2.2
1,862,443	-		Echvi_1618	0.55	-2.6
1,862,443	-		Echvi_1618	0.55	+2.7
1,862,468	+		Echvi_1618	0.58	-2.2
1,862,468	+		Echvi_1618	0.58	-1.4
1,862,468	+		Echvi_1618	0.58	-0.2
1,862,469	-		Echvi_1618	0.58	+0.2
1,862,472	+		Echvi_1618	0.58	+0.5
1,862,472	+		Echvi_1618	0.58	-0.5
1,862,473	-		Echvi_1618	0.58	+1.4
1,862,476	+		Echvi_1618	0.58	+0.5
1,862,477	-		Echvi_1618	0.58	+0.0
1,862,477	-		Echvi_1618	0.58	+1.2
1,862,477	-		Echvi_1618	0.58	-0.6
1,862,477	-		Echvi_1618	0.58	-0.2
1,862,477	-		Echvi_1618	0.58	+0.4
1,862,479	+		Echvi_1618	0.59	-1.8
1,862,479	+		Echvi_1618	0.59	+0.7
1,862,479	+		Echvi_1618	0.59	-1.2
1,862,479	+				+0.4
1,862,480	-		Echvi_1618	0.59	-2.6
1,862,517	+		Echvi_1618	0.62	-1.1
1,862,643	+		Echvi_1618	0.74	+0.9
1,862,643	+		Echvi_1618	0.74	-2.6
1,862,674	+		Echvi_1618	0.77	+0.1
1,862,674	+		Echvi_1618	0.77	-0.4
1,862,674	+		Echvi_1618	0.77	-0.7
1,862,674	+		Echvi_1618	0.77	-0.9
1,862,674	+		Echvi_1618	0.77	+0.2
1,862,675	-		Echvi_1618	0.77	-0.1
1,862,675	-		Echvi_1618	0.77	-0.6
1,862,675	-		Echvi_1618	0.77	+1.0
1,862,728	+		Echvi_1618	0.82	-0.4
1,862,728	+		Echvi_1618	0.82	-0.3
1,862,745	-		Echvi_1618	0.84	+0.2
1,862,759	-		Echvi_1618	0.85	-0.1
1,862,759	-		Echvi_1618	0.85	+0.3
1,862,761	+		Echvi_1618	0.86	+0.8
1,862,762	-		Echvi_1618	0.86	+0.8
1,862,762	-		Echvi_1618	0.86	+1.4
1,862,762	-		Echvi_1618	0.86	-0.2