Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1564

Experiment: D-Trehalose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose (C)
1,796,640	+		Echvi_1562	0.36	+0.6
1,796,640	+		Echvi_1562	0.36	+2.3
1,796,640	+		Echvi_1562	0.36	-0.1
1,796,641	-		Echvi_1562	0.36	-0.0
1,796,662	-		Echvi_1562	0.38	-1.2
1,796,681	-		Echvi_1562	0.40	-0.1
1,796,712	-		Echvi_1562	0.43	+0.1
1,796,713	+		Echvi_1562	0.43	-0.5
1,796,714	-		Echvi_1562	0.43	-1.6
1,796,714	-		Echvi_1562	0.43	-0.4
1,796,800	+		Echvi_1562	0.51	-1.6
1,796,801	-		Echvi_1562	0.51	-1.1
1,796,810	-		Echvi_1562	0.51	-0.6
1,796,817	-		Echvi_1562	0.52	-0.4
1,796,834	+		Echvi_1562	0.54	-0.1
1,796,863	+		Echvi_1562	0.56	-2.0
1,796,868	+		Echvi_1562	0.57	-1.3
1,796,881	+		Echvi_1562	0.58	-0.9
1,796,912	+		Echvi_1562	0.61	-1.8
1,796,913	-		Echvi_1562	0.61	-1.1
1,796,913	-		Echvi_1562	0.61	-1.3
1,796,960	+		Echvi_1562	0.65	+0.3
1,796,960	+		Echvi_1562	0.65	+2.4
1,796,961	-		Echvi_1562	0.65	-0.1
1,796,963	-		Echvi_1562	0.65	-1.1
1,796,963	-		Echvi_1562	0.65	+0.1
1,797,013	+		Echvi_1562	0.70	+2.3
1,797,013	+		Echvi_1562	0.70	-0.4
1,797,013	+		Echvi_1562	0.70	+0.7
1,797,023	+		Echvi_1562	0.71	+1.0
1,797,024	-		Echvi_1562	0.71	+0.2
1,797,024	-		Echvi_1562	0.71	+0.3
1,797,029	+		Echvi_1562	0.71	-0.3
1,797,086	-		Echvi_1562	0.76	-1.6
1,797,086	-		Echvi_1562	0.76	+0.9
1,797,098	-		Echvi_1562	0.77	-0.1
1,797,121	+		Echvi_1562	0.79	+0.6
1,797,122	-		Echvi_1562	0.79	-0.4
1,797,151	-		Echvi_1562	0.82	-1.8
1,797,165	+		Echvi_1562	0.83	+0.0
1,797,166	-		Echvi_1562	0.83	+0.9
1,797,166	-		Echvi_1562	0.83	+0.3
1,797,186	+		Echvi_1562	0.85	+2.3
1,797,205	-		Echvi_1562	0.87	-2.1
1,797,205	-		Echvi_1562	0.87	-0.9
1,797,325	+				-2.3
1,797,326	-				+1.2
1,797,326	-				-0.1
1,797,334	+				-0.6
1,797,350	+				+0.7
1,797,351	-				+0.4
1,797,373	-				-1.8
1,797,379	+				-3.3
1,797,413	+		Echvi_1563	0.15	+0.6
1,797,413	+		Echvi_1563	0.15	+0.6
1,797,414	-		Echvi_1563	0.15	-1.9
1,797,414	-		Echvi_1563	0.15	-0.6
1,797,458	+		Echvi_1563	0.42	+1.4
1,797,557	-				-1.7
1,797,557	-				+0.5
1,797,557	-				-0.6
1,797,561	-				+3.9
1,797,640	+				-1.4
1,797,661	+				-0.8
1,797,663	+				+0.9
1,797,664	-				-0.6
1,797,664	-				+0.9
1,797,685	-		Echvi_1564	0.12	-0.0
1,797,699	+		Echvi_1564	0.14	-0.6
1,797,726	+		Echvi_1564	0.17	+0.4
1,797,726	+		Echvi_1564	0.17	+0.8
1,797,726	+		Echvi_1564	0.17	+0.4
1,797,726	+		Echvi_1564	0.17	+0.9
1,797,726	+		Echvi_1564	0.17	+0.9
1,797,726	+		Echvi_1564	0.17	+0.3
1,797,726	+		Echvi_1564	0.17	-0.3
1,797,726	+		Echvi_1564	0.17	-2.8
1,797,727	-		Echvi_1564	0.17	+0.3
1,797,727	-		Echvi_1564	0.17	-1.9
1,797,730	+		Echvi_1564	0.17	+1.4
1,797,731	-		Echvi_1564	0.18	+0.5
1,797,731	-		Echvi_1564	0.18	-0.1
1,797,738	-		Echvi_1564	0.18	-0.6
1,797,738	-		Echvi_1564	0.18	+0.3
1,797,773	-		Echvi_1564	0.23	+1.0
1,797,773	-		Echvi_1564	0.23	-0.1
1,797,780	+		Echvi_1564	0.24	-1.0
1,797,780	+		Echvi_1564	0.24	-1.6
1,797,781	-		Echvi_1564	0.24	-1.6
1,797,781	-		Echvi_1564	0.24	+0.3
1,797,781	-		Echvi_1564	0.24	-2.8
1,797,781	-		Echvi_1564	0.24	-0.0
1,797,781	-		Echvi_1564	0.24	+0.3
1,797,785	-		Echvi_1564	0.24	+1.8
1,797,849	-		Echvi_1564	0.32	+1.2
1,797,855	+		Echvi_1564	0.33	-1.9
1,797,855	+		Echvi_1564	0.33	+0.9
1,797,855	+		Echvi_1564	0.33	-0.4
1,797,859	-		Echvi_1564	0.33	-0.3
1,797,884	+		Echvi_1564	0.37	-0.7
1,797,884	+		Echvi_1564	0.37	+0.9
1,797,884	+		Echvi_1564	0.37	+1.0
1,797,884	+		Echvi_1564	0.37	+0.6
1,797,885	-		Echvi_1564	0.37	+0.9
1,797,885	-		Echvi_1564	0.37	-0.9
1,797,885	-		Echvi_1564	0.37	-2.6
1,797,885	-		Echvi_1564	0.37	-0.1
1,797,889	+		Echvi_1564	0.37	-2.3
1,797,889	+		Echvi_1564	0.37	+0.9
1,797,890	-		Echvi_1564	0.37	-2.0
1,798,014	-		Echvi_1564	0.53	+0.6
1,798,118	-		Echvi_1564	0.66	-1.1
1,798,135	+		Echvi_1564	0.68	-1.1
1,798,136	-		Echvi_1564	0.68	-1.3
1,798,140	-		Echvi_1564	0.68	+1.1
1,798,140	-		Echvi_1564	0.68	+0.2
1,798,140	-		Echvi_1564	0.68	+0.6
1,798,211	-		Echvi_1564	0.77	+0.4
1,798,211	-		Echvi_1564	0.77	-1.0
1,798,211	-		Echvi_1564	0.77	-0.5
1,798,211	-		Echvi_1564	0.77	-0.3
1,798,320	+				+0.6
1,798,327	+				-0.0
1,798,327	+				+0.4
1,798,328	-				+1.4
1,798,361	+				-0.1
1,798,361	+				+0.1
1,798,362	-				+0.1
1,798,369	+				-1.6
1,798,369	+				+1.9
1,798,369	+				-1.7
1,798,370	-				-1.1
1,798,370	-				+1.4
1,798,373	+				-0.6
1,798,374	-				+0.1
1,798,391	+				+0.5
1,798,392	-				-0.7
1,798,394	+				+0.0
1,798,395	-				-1.1
1,798,395	-				-0.6
1,798,462	+				+0.7
1,798,462	+				-2.3
1,798,463	-				-1.6
1,798,470	-				-3.2
1,798,514	-				-2.3
1,798,738	+		Echvi_1565	0.15	-1.3
1,798,742	-		Echvi_1565	0.15	-1.4
1,798,781	-		Echvi_1565	0.17	-2.2
1,798,784	+		Echvi_1565	0.18	-1.7
1,798,849	+		Echvi_1565	0.21	+1.2
1,798,850	-		Echvi_1565	0.21	-1.2
1,798,858	+		Echvi_1565	0.22	-1.0
1,798,859	-		Echvi_1565	0.22	-2.0
1,798,859	-		Echvi_1565	0.22	+0.1
1,798,904	+		Echvi_1565	0.24	-1.2
1,798,904	+		Echvi_1565	0.24	-0.5
1,798,996	+		Echvi_1565	0.30	+0.1
1,798,997	-		Echvi_1565	0.30	-2.6
1,799,001	-		Echvi_1565	0.30	-1.3
1,799,033	+		Echvi_1565	0.32	-1.1
1,799,033	+		Echvi_1565	0.32	-2.6
1,799,034	-		Echvi_1565	0.32	-1.5
1,799,034	-		Echvi_1565	0.32	-1.4
1,799,034	-		Echvi_1565	0.32	-1.4
1,799,039	-		Echvi_1565	0.32	+0.2
1,799,039	-		Echvi_1565	0.32	-1.3
1,799,195	+		Echvi_1565	0.41	-0.6
1,799,252	+		Echvi_1565	0.44	-1.4
1,799,336	-		Echvi_1565	0.49	-4.3
1,799,372	+		Echvi_1565	0.51	-1.1
1,799,372	+		Echvi_1565	0.51	-2.3
1,799,372	+		Echvi_1565	0.51	-1.0