Experiment: m.b. Carbenicillin 0.0015 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18415 and CA264_18420 are separated by 421 nucleotides CA264_18420 and CA264_18425 are separated by 173 nucleotides CA264_18425 and CA264_18430 are separated by 97 nucleotides CA264_18430 and CA264_18435 are separated by 10 nucleotides CA264_18435 and CA264_18440 are separated by 193 nucleotides
CA264_18415: CA264_18415 - alanine dehydrogenase, at 4,284,099 to 4,285,343
_18415
CA264_18420: CA264_18420 - hypothetical protein, at 4,285,765 to 4,286,028
_18420
CA264_18425: CA264_18425 - 16S ribosomal RNA, at 4,286,202 to 4,287,722
_18425
CA264_18430: CA264_18430 - tRNA-Ile, at 4,287,820 to 4,287,896
_18430
CA264_18435: CA264_18435 - tRNA-Ala, at 4,287,907 to 4,287,980
_18435
CA264_18440: CA264_18440 - 23S ribosomal RNA, at 4,288,174 to 4,291,059
_18440
Position (kb)
4286
4287
4288 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4285.229 kb on + strand at 4285.285 kb on - strand at 4285.285 kb on - strand at 4285.297 kb on - strand at 4285.319 kb on + strand at 4285.339 kb on + strand at 4285.345 kb on - strand at 4285.345 kb on - strand at 4285.345 kb on - strand at 4285.345 kb on - strand at 4285.345 kb on - strand at 4285.345 kb on - strand at 4285.347 kb on - strand at 4285.347 kb on - strand at 4285.347 kb on - strand at 4285.347 kb on - strand at 4285.347 kb on - strand at 4285.350 kb on - strand at 4285.350 kb on - strand at 4285.352 kb on - strand at 4285.355 kb on - strand at 4285.360 kb on - strand at 4285.362 kb on - strand at 4285.362 kb on - strand at 4285.365 kb on - strand at 4285.365 kb on - strand at 4285.367 kb on - strand at 4285.367 kb on - strand at 4285.372 kb on - strand at 4285.372 kb on - strand at 4285.375 kb on - strand at 4285.375 kb on - strand at 4285.386 kb on + strand at 4285.394 kb on + strand at 4285.396 kb on + strand at 4285.396 kb on + strand at 4285.396 kb on + strand at 4285.396 kb on + strand at 4285.396 kb on + strand at 4285.396 kb on + strand at 4285.399 kb on + strand at 4285.399 kb on + strand at 4285.399 kb on + strand at 4285.401 kb on + strand at 4285.401 kb on + strand at 4285.404 kb on + strand at 4285.404 kb on + strand at 4285.406 kb on + strand at 4285.406 kb on + strand at 4285.409 kb on + strand at 4285.411 kb on + strand at 4285.411 kb on + strand at 4285.411 kb on + strand at 4285.411 kb on + strand at 4285.414 kb on + strand at 4285.414 kb on + strand at 4285.416 kb on + strand at 4285.416 kb on + strand at 4285.419 kb on + strand at 4285.436 kb on + strand at 4285.436 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.0015 mg/ml remove 4,285,229 + +0.9 4,285,285 - +0.4 4,285,285 - -1.0 4,285,297 - -0.2 4,285,319 + -0.2 4,285,339 + -0.1 4,285,345 - -0.3 4,285,345 - +0.7 4,285,345 - -0.2 4,285,345 - -1.1 4,285,345 - +0.6 4,285,345 - -0.1 4,285,347 - -0.8 4,285,347 - -0.6 4,285,347 - +0.7 4,285,347 - +0.6 4,285,347 - -0.7 4,285,350 - -0.2 4,285,350 - -0.6 4,285,352 - +0.3 4,285,355 - -0.0 4,285,360 - -0.2 4,285,362 - -0.1 4,285,362 - -0.5 4,285,365 - -0.2 4,285,365 - -0.9 4,285,367 - -0.3 4,285,367 - -0.7 4,285,372 - +0.4 4,285,372 - -0.3 4,285,375 - +0.1 4,285,375 - +0.7 4,285,386 + +0.0 4,285,394 + -0.5 4,285,396 + +0.4 4,285,396 + +0.6 4,285,396 + -0.7 4,285,396 + -0.3 4,285,396 + -0.0 4,285,396 + -0.9 4,285,399 + +0.1 4,285,399 + +2.0 4,285,399 + +0.7 4,285,401 + +0.7 4,285,401 + +0.1 4,285,404 + -0.6 4,285,404 + -0.5 4,285,406 + -2.2 4,285,406 + +0.3 4,285,409 + +0.2 4,285,411 + +0.3 4,285,411 + -1.2 4,285,411 + -1.3 4,285,411 + -0.1 4,285,414 + -0.1 4,285,414 + +1.5 4,285,416 + +0.3 4,285,416 + +0.2 4,285,419 + -1.3 4,285,436 + +0.5 4,285,436 + +1.0
Or see this region's nucleotide sequence