Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_14990
Experiment: m.b. Carbenicillin 0.0015 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Carbenicillin 0.0015 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,517,207 | + | -0.2 | |||
3,517,208 | - | -0.8 | |||
3,517,378 | + | CA264_14985 | 0.15 | -2.3 | |
3,517,567 | + | CA264_14985 | 0.37 | -0.7 | |
3,517,568 | - | CA264_14985 | 0.37 | -2.1 | |
3,517,630 | + | CA264_14985 | 0.44 | +0.1 | |
3,517,631 | - | CA264_14985 | 0.44 | -1.6 | |
3,517,631 | - | CA264_14985 | 0.44 | -2.3 | |
3,517,635 | - | CA264_14985 | 0.45 | -1.6 | |
3,517,700 | - | CA264_14985 | 0.52 | -2.1 | |
3,517,784 | - | CA264_14985 | 0.62 | -1.7 | |
3,517,860 | - | CA264_14985 | 0.71 | -2.2 | |
3,518,040 | + | +0.1 | |||
3,518,097 | + | +0.9 | |||
3,518,592 | + | -0.6 | |||
3,518,595 | + | +0.0 | |||
3,518,802 | - | -2.7 | |||
3,518,893 | - | -0.7 | |||
3,518,906 | - | -2.9 | |||
3,518,907 | + | +0.6 | |||
3,518,907 | + | -1.1 | |||
3,518,907 | + | -0.7 | |||
3,518,907 | + | -0.8 | |||
3,518,907 | + | -2.5 | |||
3,518,907 | + | -1.4 | |||
3,518,907 | + | -0.8 | |||
3,518,908 | - | -2.4 | |||
3,518,908 | - | -1.5 | |||
3,518,908 | - | -2.6 | |||
3,518,908 | - | -1.1 | |||
3,518,965 | + | CA264_14995 | 0.15 | -0.4 | |
3,519,058 | + | CA264_14995 | 0.23 | -0.0 | |
3,519,133 | + | CA264_14995 | 0.30 | -0.9 | |
3,519,153 | - | CA264_14995 | 0.32 | -2.2 | |
3,519,170 | - | CA264_14995 | 0.33 | +0.0 | |
3,519,380 | + | CA264_14995 | 0.53 | -0.6 | |
3,519,381 | - | CA264_14995 | 0.53 | -1.3 |
Or see this region's nucleotide sequence