Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_13370

Experiment: m.b. Carbenicillin 0.0015 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_13365 and CA264_13370 are separated by 3 nucleotidesCA264_13370 and CA264_13375 are separated by 307 nucleotides CA264_13365: CA264_13365 - molecular chaperone DnaJ, at 3,117,105 to 3,118,256 _13365 CA264_13370: CA264_13370 - nucleotide exchange factor GrpE, at 3,118,260 to 3,118,826 _13370 CA264_13375: CA264_13375 - GTPase Obg, at 3,119,134 to 3,120,126 _13375 Position (kb) 3118 3119Strain fitness (log2 ratio) -2 -1 0 1 2at 3117.425 kb on - strand, within CA264_13365at 3117.425 kb on - strand, within CA264_13365at 3118.261 kb on + strandat 3118.270 kb on - strandat 3118.826 kb on + strandat 3118.827 kb on - strandat 3118.858 kb on - strandat 3119.020 kb on - strandat 3119.078 kb on - strandat 3119.114 kb on + strandat 3119.114 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.0015 mg/ml
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3,117,425 - CA264_13365 0.28 +1.4
3,117,425 - CA264_13365 0.28 +0.4
3,118,261 + -0.5
3,118,270 - -2.2
3,118,826 + +0.2
3,118,827 - -0.3
3,118,858 - +0.2
3,119,020 - +0.5
3,119,078 - +2.4
3,119,114 + -1.5
3,119,114 + +0.7

Or see this region's nucleotide sequence