Experiment: m.b. Carbenicillin 0.0015 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_04390 and CA264_04395 are separated by 8 nucleotides CA264_04395 and CA264_04400 are separated by 3 nucleotides
CA264_04390: CA264_04390 - ABC transporter permease, at 1,016,114 to 1,016,929
_04390
CA264_04395: CA264_04395 - ABC transporter ATP-binding protein, at 1,016,938 to 1,017,711
_04395
CA264_04400: CA264_04400 - ABC transporter permease, at 1,017,715 to 1,018,731
_04400
Position (kb)
1016
1017
1018 Strain fitness (log2 ratio)
-2
-1
0
1 at 1015.991 kb on + strand at 1015.993 kb on + strand at 1015.996 kb on - strand at 1015.996 kb on - strand at 1015.998 kb on - strand at 1016.021 kb on + strand at 1016.030 kb on - strand at 1016.037 kb on + strand at 1016.071 kb on - strand at 1016.112 kb on + strand at 1016.113 kb on - strand at 1016.121 kb on + strand at 1016.140 kb on + strand at 1016.160 kb on - strand at 1016.285 kb on + strand, within CA264_04390 at 1016.285 kb on + strand, within CA264_04390 at 1016.285 kb on + strand, within CA264_04390 at 1016.286 kb on - strand, within CA264_04390 at 1016.286 kb on - strand, within CA264_04390 at 1016.292 kb on + strand, within CA264_04390 at 1016.423 kb on - strand, within CA264_04390 at 1016.561 kb on - strand, within CA264_04390 at 1016.599 kb on + strand, within CA264_04390 at 1016.600 kb on - strand, within CA264_04390 at 1016.621 kb on + strand, within CA264_04390 at 1016.621 kb on + strand, within CA264_04390 at 1016.622 kb on - strand, within CA264_04390 at 1016.622 kb on - strand, within CA264_04390 at 1016.622 kb on - strand, within CA264_04390 at 1016.622 kb on - strand, within CA264_04390 at 1016.622 kb on - strand, within CA264_04390 at 1016.661 kb on + strand, within CA264_04390 at 1016.661 kb on + strand, within CA264_04390 at 1016.661 kb on + strand, within CA264_04390 at 1016.662 kb on - strand, within CA264_04390 at 1016.662 kb on - strand, within CA264_04390 at 1016.693 kb on + strand, within CA264_04390 at 1016.748 kb on + strand, within CA264_04390 at 1016.770 kb on + strand, within CA264_04390 at 1016.792 kb on + strand, within CA264_04390 at 1016.792 kb on + strand, within CA264_04390 at 1016.792 kb on + strand, within CA264_04390 at 1016.792 kb on + strand, within CA264_04390 at 1016.793 kb on - strand, within CA264_04390 at 1016.909 kb on - strand at 1016.909 kb on - strand at 1016.909 kb on - strand at 1016.960 kb on + strand at 1016.960 kb on + strand at 1017.253 kb on - strand, within CA264_04395 at 1017.372 kb on - strand, within CA264_04395 at 1017.430 kb on - strand at 1017.460 kb on + strand, within CA264_04395 at 1017.460 kb on + strand, within CA264_04395 at 1017.460 kb on + strand, within CA264_04395 at 1017.461 kb on - strand, within CA264_04395 at 1017.461 kb on - strand, within CA264_04395 at 1017.558 kb on + strand, within CA264_04395 at 1017.574 kb on - strand, within CA264_04395 at 1017.658 kb on - strand at 1017.695 kb on - strand at 1017.705 kb on - strand at 1017.709 kb on + strand at 1017.709 kb on + strand at 1017.709 kb on + strand at 1017.710 kb on - strand at 1017.710 kb on - strand at 1017.710 kb on - strand at 1017.713 kb on + strand at 1017.741 kb on + strand at 1017.741 kb on + strand at 1017.742 kb on - strand at 1017.742 kb on - strand at 1017.742 kb on - strand at 1017.743 kb on + strand at 1017.779 kb on + strand at 1017.779 kb on + strand at 1017.798 kb on - strand at 1017.825 kb on + strand, within CA264_04400 at 1017.826 kb on - strand, within CA264_04400 at 1017.838 kb on - strand, within CA264_04400 at 1017.971 kb on + strand, within CA264_04400 at 1017.972 kb on - strand, within CA264_04400 at 1017.972 kb on - strand, within CA264_04400 at 1017.991 kb on + strand, within CA264_04400 at 1017.991 kb on + strand, within CA264_04400 at 1018.042 kb on - strand, within CA264_04400 at 1018.203 kb on - strand, within CA264_04400 at 1018.347 kb on + strand, within CA264_04400 at 1018.362 kb on + strand, within CA264_04400 at 1018.363 kb on - strand, within CA264_04400 at 1018.402 kb on - strand, within CA264_04400 at 1018.530 kb on - strand, within CA264_04400
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.0015 mg/ml remove 1,015,991 + -0.3 1,015,993 + +0.2 1,015,996 - -0.2 1,015,996 - -1.0 1,015,998 - -0.3 1,016,021 + -0.2 1,016,030 - -0.4 1,016,037 + -1.5 1,016,071 - -0.4 1,016,112 + +0.3 1,016,113 - -0.3 1,016,121 + -0.0 1,016,140 + -2.1 1,016,160 - -0.7 1,016,285 + CA264_04390 0.21 -0.7 1,016,285 + CA264_04390 0.21 +0.3 1,016,285 + CA264_04390 0.21 -1.4 1,016,286 - CA264_04390 0.21 +1.0 1,016,286 - CA264_04390 0.21 +1.0 1,016,292 + CA264_04390 0.22 -0.9 1,016,423 - CA264_04390 0.38 +0.2 1,016,561 - CA264_04390 0.55 -1.0 1,016,599 + CA264_04390 0.59 +0.1 1,016,600 - CA264_04390 0.60 +1.0 1,016,621 + CA264_04390 0.62 -0.1 1,016,621 + CA264_04390 0.62 +0.3 1,016,622 - CA264_04390 0.62 -0.9 1,016,622 - CA264_04390 0.62 -0.8 1,016,622 - CA264_04390 0.62 -0.4 1,016,622 - CA264_04390 0.62 -0.0 1,016,622 - CA264_04390 0.62 +0.8 1,016,661 + CA264_04390 0.67 -0.7 1,016,661 + CA264_04390 0.67 -1.7 1,016,661 + CA264_04390 0.67 -1.4 1,016,662 - CA264_04390 0.67 -1.7 1,016,662 - CA264_04390 0.67 -1.7 1,016,693 + CA264_04390 0.71 -1.3 1,016,748 + CA264_04390 0.78 -1.1 1,016,770 + CA264_04390 0.80 -0.4 1,016,792 + CA264_04390 0.83 -0.4 1,016,792 + CA264_04390 0.83 -1.4 1,016,792 + CA264_04390 0.83 -1.0 1,016,792 + CA264_04390 0.83 -0.9 1,016,793 - CA264_04390 0.83 -1.3 1,016,909 - -2.6 1,016,909 - -0.0 1,016,909 - -0.1 1,016,960 + -2.0 1,016,960 + +0.5 1,017,253 - CA264_04395 0.41 -0.6 1,017,372 - CA264_04395 0.56 -1.3 1,017,430 - +1.0 1,017,460 + CA264_04395 0.67 -1.6 1,017,460 + CA264_04395 0.67 -0.9 1,017,460 + CA264_04395 0.67 -0.4 1,017,461 - CA264_04395 0.68 +0.3 1,017,461 - CA264_04395 0.68 -0.3 1,017,558 + CA264_04395 0.80 -0.2 1,017,574 - CA264_04395 0.82 -1.9 1,017,658 - -0.0 1,017,695 - -1.6 1,017,705 - -0.4 1,017,709 + -0.4 1,017,709 + -0.3 1,017,709 + -0.7 1,017,710 - +0.1 1,017,710 - -0.7 1,017,710 - +0.8 1,017,713 + -0.9 1,017,741 + +1.0 1,017,741 + +0.9 1,017,742 - -0.3 1,017,742 - -2.5 1,017,742 - +0.3 1,017,743 + -0.6 1,017,779 + +0.2 1,017,779 + -0.0 1,017,798 - -0.5 1,017,825 + CA264_04400 0.11 +0.1 1,017,826 - CA264_04400 0.11 -0.5 1,017,838 - CA264_04400 0.12 +1.2 1,017,971 + CA264_04400 0.25 +0.2 1,017,972 - CA264_04400 0.25 -0.5 1,017,972 - CA264_04400 0.25 +1.1 1,017,991 + CA264_04400 0.27 -0.9 1,017,991 + CA264_04400 0.27 +1.0 1,018,042 - CA264_04400 0.32 -0.3 1,018,203 - CA264_04400 0.48 +0.2 1,018,347 + CA264_04400 0.62 -1.1 1,018,362 + CA264_04400 0.64 +0.6 1,018,363 - CA264_04400 0.64 -0.4 1,018,402 - CA264_04400 0.68 -0.0 1,018,530 - CA264_04400 0.80 -0.6
Or see this region's nucleotide sequence