Experiment: m.b. Carbenicillin 0.0015 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_03780 and CA264_03785 are separated by 114 nucleotides CA264_03785 and CA264_03790 are separated by 44 nucleotides CA264_03790 and CA264_03795 are separated by 92 nucleotides
CA264_03780: CA264_03780 - diacylglycerol kinase, at 886,139 to 887,020
_03780
CA264_03785: CA264_03785 - translation initiation factor, at 887,135 to 887,482
_03785
CA264_03790: CA264_03790 - hypothetical protein, at 887,527 to 887,961
_03790
CA264_03795: CA264_03795 - 3-deoxy-manno-octulosonate cytidylyltransferase, at 888,054 to 888,788
_03795
Position (kb) 887
888 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 887.078 kb on + strand at 887.079 kb on - strand at 887.079 kb on - strand at 887.093 kb on + strand at 887.094 kb on - strand at 887.105 kb on + strand at 887.107 kb on + strand at 887.108 kb on - strand at 887.172 kb on + strand, within CA264_03785 at 887.198 kb on + strand, within CA264_03785 at 887.198 kb on + strand, within CA264_03785 at 887.199 kb on - strand, within CA264_03785 at 887.295 kb on + strand, within CA264_03785 at 887.431 kb on - strand, within CA264_03785 at 887.459 kb on - strand at 887.511 kb on + strand at 887.597 kb on - strand, within CA264_03790 at 887.635 kb on + strand, within CA264_03790 at 887.636 kb on - strand, within CA264_03790 at 887.708 kb on + strand, within CA264_03790 at 887.732 kb on + strand, within CA264_03790 at 887.824 kb on + strand, within CA264_03790 at 887.824 kb on + strand, within CA264_03790 at 887.904 kb on - strand, within CA264_03790 at 887.904 kb on - strand, within CA264_03790 at 887.918 kb on + strand at 888.031 kb on + strand at 888.031 kb on + strand at 888.032 kb on - strand at 888.032 kb on - strand at 888.032 kb on - strand at 888.032 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.0015 mg/ml remove 887,078 + +0.4 887,079 - -1.0 887,079 - +0.2 887,093 + +0.6 887,094 - -0.5 887,105 + -1.1 887,107 + +0.4 887,108 - -0.7 887,172 + CA264_03785 0.11 +0.3 887,198 + CA264_03785 0.18 +0.8 887,198 + CA264_03785 0.18 -0.7 887,199 - CA264_03785 0.18 +0.3 887,295 + CA264_03785 0.46 +0.2 887,431 - CA264_03785 0.85 -0.3 887,459 - -3.3 887,511 + +0.6 887,597 - CA264_03790 0.16 -1.3 887,635 + CA264_03790 0.25 +0.2 887,636 - CA264_03790 0.25 +0.5 887,708 + CA264_03790 0.42 -0.3 887,732 + CA264_03790 0.47 +0.3 887,824 + CA264_03790 0.68 +1.9 887,824 + CA264_03790 0.68 -0.1 887,904 - CA264_03790 0.87 -2.0 887,904 - CA264_03790 0.87 +0.9 887,918 + +0.4 888,031 + -1.0 888,031 + -0.3 888,032 - -2.4 888,032 - +0.0 888,032 - -0.4 888,032 - -1.7
Or see this region's nucleotide sequence