Experiment: m.b. Carbenicillin 0.0015 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01850 and CA264_01855 are separated by 274 nucleotides CA264_01855 and CA264_01860 are separated by 14 nucleotides CA264_01860 and CA264_01865 are separated by 385 nucleotides
CA264_01850: CA264_01850 - hypothetical protein, at 432,994 to 433,482
_01850
CA264_01855: CA264_01855 - carbonic anhydrase, at 433,757 to 434,383
_01855
CA264_01860: CA264_01860 - hypothetical protein, at 434,398 to 435,303
_01860
CA264_01865: CA264_01865 - polyisoprenoid-binding protein, at 435,689 to 436,225
_01865
Position (kb) 434
435
436 Strain fitness (log2 ratio) -2
-1
0
1
2 at 433.475 kb on - strand at 433.478 kb on - strand at 433.478 kb on - strand at 433.478 kb on - strand at 433.482 kb on + strand at 433.483 kb on - strand at 433.485 kb on - strand at 433.485 kb on - strand at 433.485 kb on - strand at 433.530 kb on - strand at 433.530 kb on - strand at 433.620 kb on - strand at 433.623 kb on + strand at 433.633 kb on + strand at 433.634 kb on - strand at 433.675 kb on - strand at 433.689 kb on - strand at 433.759 kb on - strand at 433.768 kb on - strand at 433.797 kb on + strand at 433.798 kb on - strand at 433.813 kb on + strand at 433.886 kb on + strand, within CA264_01855 at 433.886 kb on + strand, within CA264_01855 at 433.886 kb on + strand, within CA264_01855 at 433.886 kb on + strand, within CA264_01855 at 433.886 kb on + strand, within CA264_01855 at 433.886 kb on + strand, within CA264_01855 at 434.033 kb on - strand, within CA264_01855 at 434.127 kb on - strand, within CA264_01855 at 434.219 kb on + strand, within CA264_01855 at 434.371 kb on + strand at 434.386 kb on + strand at 434.391 kb on + strand at 434.391 kb on + strand at 434.391 kb on + strand at 434.399 kb on + strand at 434.399 kb on + strand at 434.399 kb on + strand at 434.399 kb on + strand at 434.403 kb on + strand at 434.403 kb on + strand at 434.404 kb on - strand at 434.404 kb on - strand at 434.408 kb on + strand at 434.408 kb on + strand at 434.408 kb on + strand at 434.409 kb on - strand at 434.409 kb on - strand at 434.409 kb on - strand at 434.409 kb on - strand at 434.411 kb on + strand at 434.412 kb on - strand at 434.464 kb on - strand at 434.558 kb on - strand, within CA264_01860 at 434.603 kb on + strand, within CA264_01860 at 434.654 kb on + strand, within CA264_01860 at 434.654 kb on + strand, within CA264_01860 at 434.654 kb on + strand, within CA264_01860 at 434.681 kb on + strand, within CA264_01860 at 434.682 kb on - strand, within CA264_01860 at 434.682 kb on - strand, within CA264_01860 at 434.686 kb on - strand, within CA264_01860 at 434.867 kb on + strand, within CA264_01860 at 434.872 kb on + strand, within CA264_01860 at 434.872 kb on + strand, within CA264_01860 at 434.873 kb on - strand, within CA264_01860 at 434.873 kb on - strand, within CA264_01860 at 434.873 kb on - strand, within CA264_01860 at 434.948 kb on + strand, within CA264_01860 at 434.970 kb on - strand, within CA264_01860 at 435.029 kb on - strand, within CA264_01860 at 435.058 kb on + strand, within CA264_01860 at 435.073 kb on + strand, within CA264_01860 at 435.117 kb on + strand, within CA264_01860 at 435.127 kb on + strand, within CA264_01860 at 435.127 kb on + strand, within CA264_01860 at 435.127 kb on + strand, within CA264_01860 at 435.128 kb on - strand, within CA264_01860 at 435.129 kb on + strand, within CA264_01860 at 435.144 kb on + strand, within CA264_01860 at 435.153 kb on + strand, within CA264_01860 at 435.185 kb on + strand, within CA264_01860 at 435.186 kb on - strand, within CA264_01860 at 435.251 kb on + strand at 435.257 kb on - strand at 435.272 kb on + strand at 435.326 kb on - strand at 435.368 kb on + strand at 435.373 kb on + strand at 435.439 kb on - strand at 435.494 kb on - strand at 435.494 kb on - strand at 435.505 kb on + strand at 435.506 kb on - strand at 435.529 kb on - strand at 435.532 kb on - strand at 435.584 kb on + strand at 435.626 kb on + strand at 435.688 kb on + strand at 435.688 kb on + strand at 435.689 kb on - strand at 435.732 kb on + strand at 435.739 kb on + strand at 435.740 kb on - strand at 435.777 kb on - strand, within CA264_01865 at 435.788 kb on + strand, within CA264_01865 at 435.791 kb on - strand, within CA264_01865 at 436.120 kb on + strand, within CA264_01865 at 436.239 kb on + strand at 436.239 kb on + strand at 436.239 kb on + strand at 436.240 kb on - strand at 436.240 kb on - strand at 436.245 kb on + strand at 436.245 kb on + strand at 436.245 kb on + strand at 436.246 kb on - strand at 436.255 kb on + strand at 436.280 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.0015 mg/ml remove 433,475 - -0.8 433,478 - -1.0 433,478 - -0.2 433,478 - +0.1 433,482 + -0.6 433,483 - +0.5 433,485 - +0.8 433,485 - +0.4 433,485 - +0.6 433,530 - -0.7 433,530 - -0.1 433,620 - -0.4 433,623 + +0.4 433,633 + +0.5 433,634 - +0.2 433,675 - +1.3 433,689 - +0.7 433,759 - -1.5 433,768 - -0.5 433,797 + -0.6 433,798 - -0.1 433,813 + +0.8 433,886 + CA264_01855 0.21 +0.2 433,886 + CA264_01855 0.21 +0.2 433,886 + CA264_01855 0.21 +0.1 433,886 + CA264_01855 0.21 -0.7 433,886 + CA264_01855 0.21 -0.1 433,886 + CA264_01855 0.21 -0.1 434,033 - CA264_01855 0.44 +0.3 434,127 - CA264_01855 0.59 +0.4 434,219 + CA264_01855 0.74 +0.5 434,371 + +0.5 434,386 + -0.4 434,391 + -0.5 434,391 + -0.8 434,391 + +0.8 434,399 + +1.2 434,399 + -1.9 434,399 + -0.6 434,399 + -1.0 434,403 + -0.8 434,403 + +1.1 434,404 - +1.3 434,404 - -1.6 434,408 + +0.4 434,408 + -0.5 434,408 + -0.0 434,409 - -0.6 434,409 - +0.0 434,409 - -0.5 434,409 - +2.1 434,411 + -0.9 434,412 - -0.6 434,464 - +0.0 434,558 - CA264_01860 0.18 -0.1 434,603 + CA264_01860 0.23 -0.4 434,654 + CA264_01860 0.28 +0.1 434,654 + CA264_01860 0.28 -0.4 434,654 + CA264_01860 0.28 -1.1 434,681 + CA264_01860 0.31 +0.7 434,682 - CA264_01860 0.31 -1.3 434,682 - CA264_01860 0.31 -0.8 434,686 - CA264_01860 0.32 -0.2 434,867 + CA264_01860 0.52 -0.3 434,872 + CA264_01860 0.52 +0.3 434,872 + CA264_01860 0.52 +0.3 434,873 - CA264_01860 0.52 -0.9 434,873 - CA264_01860 0.52 +0.2 434,873 - CA264_01860 0.52 -0.0 434,948 + CA264_01860 0.61 -0.9 434,970 - CA264_01860 0.63 -0.3 435,029 - CA264_01860 0.70 +0.8 435,058 + CA264_01860 0.73 -0.0 435,073 + CA264_01860 0.75 -0.3 435,117 + CA264_01860 0.79 -0.5 435,127 + CA264_01860 0.80 -0.1 435,127 + CA264_01860 0.80 +0.5 435,127 + CA264_01860 0.80 -1.2 435,128 - CA264_01860 0.81 -1.0 435,129 + CA264_01860 0.81 -1.1 435,144 + CA264_01860 0.82 -0.3 435,153 + CA264_01860 0.83 -0.5 435,185 + CA264_01860 0.87 -0.5 435,186 - CA264_01860 0.87 -0.9 435,251 + +0.1 435,257 - +0.7 435,272 + +0.4 435,326 - -0.3 435,368 + -0.0 435,373 + -0.9 435,439 - -1.8 435,494 - -0.6 435,494 - -1.2 435,505 + +0.1 435,506 - -0.8 435,529 - -0.6 435,532 - -0.1 435,584 + -1.4 435,626 + -0.3 435,688 + +0.3 435,688 + -1.1 435,689 - +0.2 435,732 + +0.0 435,739 + -1.2 435,740 - -0.3 435,777 - CA264_01865 0.16 -0.2 435,788 + CA264_01865 0.18 -0.4 435,791 - CA264_01865 0.19 +0.5 436,120 + CA264_01865 0.80 +2.0 436,239 + -0.4 436,239 + -0.2 436,239 + +0.4 436,240 - -0.6 436,240 - +0.7 436,245 + +2.4 436,245 + -1.1 436,245 + +0.2 436,246 - -1.4 436,255 + -0.4 436,280 - +0.2
Or see this region's nucleotide sequence