Experiment: m.b. Carbenicillin 0.0015 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01530 and CA264_01535 are separated by 90 nucleotides CA264_01535 and CA264_01540 are separated by 440 nucleotides CA264_01540 and CA264_01545 are separated by 147 nucleotides
CA264_01530: CA264_01530 - hypothetical protein, at 362,687 to 363,730
_01530
CA264_01535: CA264_01535 - hypothetical protein, at 363,821 to 364,003
_01535
CA264_01540: CA264_01540 - hypothetical protein, at 364,444 to 364,767
_01540
CA264_01545: CA264_01545 - 3-deoxy-7-phosphoheptulonate synthase, at 364,915 to 366,036
_01545
Position (kb) 364
365 Strain fitness (log2 ratio) -2
-1
0
1 at 363.445 kb on + strand, within CA264_01530 at 363.445 kb on + strand, within CA264_01530 at 363.446 kb on - strand, within CA264_01530 at 363.446 kb on - strand, within CA264_01530 at 363.446 kb on - strand, within CA264_01530 at 363.447 kb on + strand, within CA264_01530 at 363.447 kb on + strand, within CA264_01530 at 363.448 kb on - strand, within CA264_01530 at 363.472 kb on - strand, within CA264_01530 at 363.485 kb on + strand, within CA264_01530 at 363.494 kb on - strand, within CA264_01530 at 363.497 kb on + strand, within CA264_01530 at 363.498 kb on - strand, within CA264_01530 at 363.619 kb on + strand, within CA264_01530 at 363.631 kb on - strand at 363.654 kb on - strand at 363.685 kb on + strand at 363.686 kb on - strand at 363.728 kb on + strand at 363.749 kb on - strand at 363.822 kb on + strand at 363.823 kb on - strand at 364.006 kb on + strand at 364.093 kb on - strand at 364.103 kb on + strand at 364.103 kb on + strand at 364.104 kb on - strand at 364.104 kb on - strand at 364.104 kb on - strand at 364.105 kb on + strand at 364.106 kb on - strand at 364.106 kb on - strand at 364.115 kb on - strand at 364.115 kb on - strand at 364.232 kb on + strand at 364.232 kb on + strand at 364.232 kb on + strand at 364.233 kb on - strand at 364.233 kb on - strand at 364.269 kb on - strand at 364.269 kb on - strand at 364.275 kb on + strand at 364.281 kb on + strand at 364.424 kb on - strand at 364.424 kb on - strand at 364.429 kb on + strand at 364.429 kb on + strand at 364.446 kb on - strand at 364.446 kb on - strand at 364.446 kb on - strand at 364.588 kb on - strand, within CA264_01540 at 364.611 kb on - strand, within CA264_01540 at 364.675 kb on - strand, within CA264_01540 at 364.675 kb on - strand, within CA264_01540 at 364.677 kb on - strand, within CA264_01540 at 364.689 kb on + strand, within CA264_01540 at 364.689 kb on + strand, within CA264_01540 at 364.693 kb on + strand, within CA264_01540 at 364.693 kb on + strand, within CA264_01540 at 364.694 kb on - strand, within CA264_01540 at 364.694 kb on - strand, within CA264_01540 at 364.712 kb on + strand, within CA264_01540 at 364.719 kb on + strand, within CA264_01540 at 364.773 kb on + strand at 364.781 kb on + strand at 364.782 kb on - strand at 364.916 kb on + strand at 364.916 kb on + strand at 364.917 kb on - strand at 364.989 kb on + strand at 364.990 kb on - strand at 365.622 kb on + strand, within CA264_01545 at 365.623 kb on - strand, within CA264_01545 at 365.635 kb on + strand, within CA264_01545 at 365.761 kb on + strand, within CA264_01545 at 365.761 kb on + strand, within CA264_01545
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.0015 mg/ml remove 363,445 + CA264_01530 0.73 -0.2 363,445 + CA264_01530 0.73 -0.1 363,446 - CA264_01530 0.73 +1.0 363,446 - CA264_01530 0.73 -2.2 363,446 - CA264_01530 0.73 +0.2 363,447 + CA264_01530 0.73 +0.2 363,447 + CA264_01530 0.73 +0.9 363,448 - CA264_01530 0.73 -1.3 363,472 - CA264_01530 0.75 -0.6 363,485 + CA264_01530 0.76 +0.4 363,494 - CA264_01530 0.77 -0.6 363,497 + CA264_01530 0.78 -1.3 363,498 - CA264_01530 0.78 +1.6 363,619 + CA264_01530 0.89 +0.0 363,631 - +0.0 363,654 - +0.3 363,685 + -1.7 363,686 - -0.2 363,728 + -0.2 363,749 - -2.1 363,822 + +0.2 363,823 - -0.6 364,006 + -1.0 364,093 - +0.2 364,103 + -0.5 364,103 + -1.1 364,104 - +0.5 364,104 - -0.8 364,104 - -0.3 364,105 + -1.2 364,106 - +0.4 364,106 - -0.8 364,115 - -0.6 364,115 - +1.2 364,232 + -1.6 364,232 + -0.5 364,232 + +0.9 364,233 - -0.2 364,233 - -0.6 364,269 - +0.3 364,269 - -0.5 364,275 + -1.1 364,281 + -1.0 364,424 - +1.1 364,424 - -1.0 364,429 + -0.9 364,429 + -0.2 364,446 - -1.0 364,446 - -0.5 364,446 - -0.1 364,588 - CA264_01540 0.44 -0.3 364,611 - CA264_01540 0.52 -0.1 364,675 - CA264_01540 0.71 +0.6 364,675 - CA264_01540 0.71 +0.1 364,677 - CA264_01540 0.72 -0.1 364,689 + CA264_01540 0.76 -0.1 364,689 + CA264_01540 0.76 +0.9 364,693 + CA264_01540 0.77 -0.5 364,693 + CA264_01540 0.77 +0.6 364,694 - CA264_01540 0.77 -0.2 364,694 - CA264_01540 0.77 +1.3 364,712 + CA264_01540 0.83 -0.3 364,719 + CA264_01540 0.85 -2.1 364,773 + -0.2 364,781 + +0.1 364,782 - +0.9 364,916 + -0.1 364,916 + +0.7 364,917 - +0.0 364,989 + -0.2 364,990 - -0.3 365,622 + CA264_01545 0.63 +0.4 365,623 - CA264_01545 0.63 +1.2 365,635 + CA264_01545 0.64 +0.3 365,761 + CA264_01545 0.75 -1.2 365,761 + CA264_01545 0.75 -0.8
Or see this region's nucleotide sequence