Experiment: octanoate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_01470 and PS417_01475 are separated by 207 nucleotides PS417_01475 and PS417_01480 are separated by 240 nucleotides
PS417_01470: PS417_01470 - cell division protein FtsQ, at 326,628 to 327,578
_01470
PS417_01475: PS417_01475 - cell division protein FtsQ, at 327,786 to 328,706
_01475
PS417_01480: PS417_01480 - SAM-dependent methyltransferase, at 328,947 to 330,134
_01480
Position (kb) 327
328
329 Strain fitness (log2 ratio) -1
0
1
2 at 326.812 kb on - strand, within PS417_01470 at 326.988 kb on - strand at 326.988 kb on - strand, within PS417_01470 at 327.217 kb on + strand, within PS417_01470 at 327.218 kb on - strand, within PS417_01470 at 327.218 kb on - strand, within PS417_01470 at 327.218 kb on - strand, within PS417_01470 at 327.220 kb on - strand, within PS417_01470 at 327.220 kb on - strand, within PS417_01470 at 327.233 kb on + strand, within PS417_01470 at 327.234 kb on - strand, within PS417_01470 at 327.234 kb on - strand, within PS417_01470 at 327.234 kb on - strand, within PS417_01470 at 327.324 kb on + strand, within PS417_01470 at 327.358 kb on - strand, within PS417_01470 at 327.358 kb on - strand, within PS417_01470 at 327.358 kb on - strand, within PS417_01470 at 327.412 kb on + strand, within PS417_01470 at 327.413 kb on - strand, within PS417_01470 at 327.413 kb on - strand, within PS417_01470 at 327.413 kb on - strand, within PS417_01470 at 327.413 kb on - strand, within PS417_01470 at 327.413 kb on - strand, within PS417_01470 at 327.470 kb on + strand, within PS417_01470 at 327.542 kb on + strand at 327.543 kb on - strand at 327.547 kb on + strand at 327.547 kb on + strand at 327.547 kb on + strand at 327.547 kb on + strand at 327.548 kb on - strand at 327.577 kb on - strand at 327.577 kb on - strand at 327.577 kb on - strand at 327.715 kb on + strand at 327.715 kb on + strand at 327.715 kb on + strand at 327.716 kb on - strand at 327.716 kb on - strand at 327.736 kb on + strand at 327.736 kb on + strand at 327.737 kb on - strand at 327.737 kb on - strand at 327.737 kb on - strand at 327.760 kb on - strand at 328.307 kb on + strand, within PS417_01475 at 328.375 kb on + strand, within PS417_01475 at 328.375 kb on + strand, within PS417_01475 at 328.566 kb on + strand, within PS417_01475 at 328.567 kb on - strand, within PS417_01475 at 328.567 kb on - strand, within PS417_01475 at 328.698 kb on + strand at 328.705 kb on - strand at 328.717 kb on - strand at 328.718 kb on + strand at 328.738 kb on + strand at 328.738 kb on + strand at 328.738 kb on + strand at 328.739 kb on - strand at 328.739 kb on - strand at 328.870 kb on + strand at 328.871 kb on - strand at 328.871 kb on - strand at 329.010 kb on + strand at 329.011 kb on - strand at 329.140 kb on + strand, within PS417_01480 at 329.209 kb on + strand at 329.264 kb on - strand, within PS417_01480 at 329.467 kb on + strand, within PS417_01480 at 329.468 kb on - strand, within PS417_01480 at 329.468 kb on - strand, within PS417_01480 at 329.468 kb on - strand, within PS417_01480 at 329.677 kb on + strand, within PS417_01480
Per-strain Table
Position Strand Gene LocusTag Fraction octanoate (C) remove 326,812 - PS417_01470 0.19 +0.5 326,988 - -0.1 326,988 - PS417_01470 0.38 -0.2 327,217 + PS417_01470 0.62 +0.2 327,218 - PS417_01470 0.62 -0.4 327,218 - PS417_01470 0.62 +0.4 327,218 - PS417_01470 0.62 +1.5 327,220 - PS417_01470 0.62 -0.2 327,220 - PS417_01470 0.62 +0.5 327,233 + PS417_01470 0.64 +0.9 327,234 - PS417_01470 0.64 -0.0 327,234 - PS417_01470 0.64 +0.4 327,234 - PS417_01470 0.64 -0.6 327,324 + PS417_01470 0.73 +0.1 327,358 - PS417_01470 0.77 +0.1 327,358 - PS417_01470 0.77 +0.3 327,358 - PS417_01470 0.77 +1.5 327,412 + PS417_01470 0.82 +0.3 327,413 - PS417_01470 0.83 +1.2 327,413 - PS417_01470 0.83 -0.6 327,413 - PS417_01470 0.83 -0.2 327,413 - PS417_01470 0.83 +0.1 327,413 - PS417_01470 0.83 +0.3 327,470 + PS417_01470 0.89 +1.0 327,542 + +0.8 327,543 - +0.2 327,547 + +0.6 327,547 + +0.2 327,547 + +1.8 327,547 + -1.3 327,548 - +0.7 327,577 - +0.2 327,577 - +0.5 327,577 - -0.2 327,715 + -0.4 327,715 + -1.3 327,715 + +0.4 327,716 - +0.6 327,716 - +0.2 327,736 + +0.2 327,736 + +0.4 327,737 - -0.2 327,737 - -0.2 327,737 - +0.3 327,760 - +0.2 328,307 + PS417_01475 0.57 +1.1 328,375 + PS417_01475 0.64 +0.1 328,375 + PS417_01475 0.64 +0.1 328,566 + PS417_01475 0.85 +1.2 328,567 - PS417_01475 0.85 -0.0 328,567 - PS417_01475 0.85 +1.1 328,698 + +0.5 328,705 - +0.3 328,717 - +0.2 328,718 + +0.2 328,738 + +0.2 328,738 + +0.3 328,738 + +0.8 328,739 - -0.4 328,739 - +0.1 328,870 + +0.5 328,871 - +0.6 328,871 - +0.2 329,010 + -0.6 329,011 - -0.0 329,140 + PS417_01480 0.16 -0.2 329,209 + -1.1 329,264 - PS417_01480 0.27 -0.2 329,467 + PS417_01480 0.44 +1.8 329,468 - PS417_01480 0.44 +0.4 329,468 - PS417_01480 0.44 +0.0 329,468 - PS417_01480 0.44 +0.3 329,677 + PS417_01480 0.61 -0.6
Or see this region's nucleotide sequence