Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4126

Experiment: D-Cellobiose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cellobiose (C)
4,939,851	+		Echvi_4125	0.63	-0.3
4,939,851	+		Echvi_4125	0.63	+1.1
4,939,852	-		Echvi_4125	0.63	+1.2
4,939,852	-		Echvi_4125	0.63	+1.7
4,939,852	-		Echvi_4125	0.63	-0.2
4,939,852	-		Echvi_4125	0.63	+0.3
4,939,852	-		Echvi_4125	0.63	+0.7
4,939,852	-		Echvi_4125	0.63	+1.2
4,939,854	-		Echvi_4125	0.63	+0.4
4,939,854	-		Echvi_4125	0.63	-1.4
4,939,855	+		Echvi_4125	0.63	-0.0
4,939,855	+		Echvi_4125	0.63	-0.7
4,940,076	-		Echvi_4125	0.73	+2.4
4,940,082	-		Echvi_4125	0.73	+0.7
4,940,098	+		Echvi_4125	0.74	-1.7
4,940,098	+		Echvi_4125	0.74	-0.7
4,940,099	-		Echvi_4125	0.74	+0.0
4,940,101	+		Echvi_4125	0.74	+0.6
4,940,101	+		Echvi_4125	0.74	-1.9
4,940,101	+		Echvi_4125	0.74	+1.5
4,940,102	-		Echvi_4125	0.74	-0.4
4,940,177	+		Echvi_4125	0.77	-0.3
4,940,177	+		Echvi_4125	0.77	-1.4
4,940,177	+		Echvi_4125	0.77	+0.1
4,940,177	+		Echvi_4125	0.77	-0.1
4,940,178	-		Echvi_4125	0.77	-2.0
4,940,183	+		Echvi_4125	0.78	-1.2
4,940,183	+		Echvi_4125	0.78	-0.5
4,940,187	+		Echvi_4125	0.78	+0.4
4,940,187	+		Echvi_4125	0.78	-0.9
4,940,188	-		Echvi_4125	0.78	-0.2
4,940,188	-		Echvi_4125	0.78	+0.6
4,940,188	-		Echvi_4125	0.78	-1.4
4,940,188	-		Echvi_4125	0.78	-1.0
4,940,188	-		Echvi_4125	0.78	-1.0
4,940,243	+		Echvi_4125	0.80	-0.3
4,940,247	-		Echvi_4125	0.81	-0.0
4,940,266	+		Echvi_4125	0.81	+1.2
4,940,285	+		Echvi_4125	0.82	-0.5
4,940,285	+		Echvi_4125	0.82	-0.9
4,940,286	-		Echvi_4125	0.82	+0.2
4,940,342	+		Echvi_4125	0.85	-2.0
4,940,347	-		Echvi_4125	0.85	-0.3
4,940,453	+		Echvi_4125	0.90	+0.2
4,940,454	-		Echvi_4125	0.90	+0.3
4,940,462	-				+0.3
4,940,501	+				-0.6
4,940,520	+				+0.0
4,940,521	-				+0.8
4,940,580	+				+0.7
4,940,650	-				+0.9
4,940,703	+				-0.8
4,940,828	+				+0.6
4,940,866	-		Echvi_4126	0.16	+1.3
4,940,870	-				+0.5
4,940,870	-		Echvi_4126	0.17	-2.3
4,940,877	-		Echvi_4126	0.18	-1.7
4,940,884	+		Echvi_4126	0.19	-1.2
4,940,885	-		Echvi_4126	0.19	+0.4
4,940,927	-		Echvi_4126	0.27	+0.5
4,940,969	+		Echvi_4126	0.34	-0.7
4,941,025	+		Echvi_4126	0.44	-1.5
4,941,037	-		Echvi_4126	0.46	-0.4
4,941,037	-		Echvi_4126	0.46	-2.0
4,941,042	-		Echvi_4126	0.47	-0.4
4,941,042	-		Echvi_4126	0.47	+0.2
4,941,086	+		Echvi_4126	0.55	-1.6
4,941,191	+		Echvi_4126	0.73	+1.5
4,941,191	+		Echvi_4126	0.73	+0.8
4,941,192	-		Echvi_4126	0.73	+0.6
4,941,192	-		Echvi_4126	0.73	-1.0
4,941,229	-		Echvi_4126	0.80	-2.3
4,941,237	+		Echvi_4126	0.81	-0.7
4,941,237	+		Echvi_4126	0.81	+0.2
4,941,238	-		Echvi_4126	0.81	+0.3
4,941,243	+		Echvi_4126	0.82	-0.1
4,941,243	+		Echvi_4126	0.82	-0.2
4,941,244	-		Echvi_4126	0.82	-0.5
4,941,296	+				+1.0
4,941,320	+				+1.3
4,941,321	-				-0.2
4,941,324	-				-1.5
4,941,333	+				-0.5
4,941,334	-				+1.4
4,941,334	-				+1.5
4,941,334	-				+0.1
4,941,334	-				-0.9
4,941,338	+				-0.5
4,941,338	+				-1.4
4,941,338	+				-0.8
4,941,360	+				-0.3
4,941,361	-				-0.2
4,941,367	+				+1.1
4,941,367	+				-0.1
4,941,367	+				+0.5
4,941,367	+				+2.1
4,941,368	-				-2.1
4,941,368	-				-0.3
4,941,368	-				+1.1
4,941,368	-				-1.0
4,941,370	+				-0.4
4,941,370	+				-0.1
4,941,371	-				-1.6
4,941,371	-				-0.0
4,941,371	-				-1.2
4,941,371	-				+0.5
4,941,371	-				-0.1
4,941,378	-				-0.4
4,941,379	+				-0.2
4,941,379	+				-1.2
4,941,380	-				-2.4
4,941,387	+				+0.4
4,941,391	+				-1.8
4,941,391	+				+0.3
4,941,391	+				-0.8
4,941,440	-				+0.1
4,941,440	-				-1.2
4,941,461	+				+0.1
4,941,461	+				+0.8
4,941,462	-				+0.2
4,941,473	+				+0.2
4,941,532	-				-0.2
4,941,532	-				+0.3
4,941,532	-				-1.8
4,941,547	+				+1.8
4,941,547	+				-2.5
4,941,547	+				-0.5
4,941,547	+				-0.1
4,941,548	-				+0.5
4,941,548	-				-1.8
4,941,548	-				+1.0
4,941,566	-				-0.1
4,941,568	+				+0.0
4,941,570	+				+0.7
4,941,570	+				+0.2
4,941,571	-				-0.5
4,941,632	-		Echvi_4127	0.12	+0.0
4,941,632	-		Echvi_4127	0.12	+0.5
4,941,654	-		Echvi_4127	0.13	+0.5
4,941,717	-		Echvi_4127	0.16	-0.6
4,941,737	+		Echvi_4127	0.17	+0.1
4,941,737	+		Echvi_4127	0.17	+0.8
4,941,741	+		Echvi_4127	0.17	+0.3
4,941,741	+		Echvi_4127	0.17	+0.5
4,941,742	-		Echvi_4127	0.17	-2.1
4,941,758	+		Echvi_4127	0.18	+0.4
4,941,758	+		Echvi_4127	0.18	-0.5
4,941,758	+		Echvi_4127	0.18	-0.0
4,941,759	-		Echvi_4127	0.18	-0.7
4,941,759	-		Echvi_4127	0.18	+0.9
4,941,759	-		Echvi_4127	0.18	+0.1
4,941,769	+		Echvi_4127	0.19	-0.1
4,941,770	-		Echvi_4127	0.19	+0.2
4,941,875	+		Echvi_4127	0.24	+0.1
4,941,875	+		Echvi_4127	0.24	-1.5
4,941,916	+		Echvi_4127	0.26	+0.1
4,941,929	-		Echvi_4127	0.27	+0.6
4,941,983	+		Echvi_4127	0.29	-0.0
4,941,983	+		Echvi_4127	0.29	+0.3
4,941,984	-		Echvi_4127	0.29	-1.6
4,941,984	-		Echvi_4127	0.29	-1.4
4,942,010	-		Echvi_4127	0.31	+0.4
4,942,069	-		Echvi_4127	0.33	+0.3
4,942,172	-		Echvi_4127	0.39	-1.9
4,942,223	+		Echvi_4127	0.41	+1.1
4,942,248	+		Echvi_4127	0.42	-0.1
4,942,280	-		Echvi_4127	0.44	-0.5
4,942,311	-		Echvi_4127	0.45	-0.1