Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2580

Experiment: D-Cellobiose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cellobiose (C)
3,058,696	+		Echvi_2578	0.56	-0.5
3,058,712	-		Echvi_2578	0.59	-2.3
3,058,733	-		Echvi_2578	0.62	-0.3
3,058,757	-		Echvi_2578	0.66	-0.1
3,058,757	-		Echvi_2578	0.66	-1.5
3,058,760	-		Echvi_2578	0.66	+0.2
3,058,769	-		Echvi_2578	0.68	-0.6
3,058,769	-		Echvi_2578	0.68	+0.5
3,058,778	+		Echvi_2578	0.69	+0.1
3,058,779	-		Echvi_2578	0.69	-0.9
3,058,779	-		Echvi_2578	0.69	+1.5
3,058,782	+		Echvi_2578	0.70	-1.1
3,058,782	+		Echvi_2578	0.70	-0.4
3,058,782	+		Echvi_2578	0.70	+0.6
3,058,783	-		Echvi_2578	0.70	+0.5
3,058,783	-		Echvi_2578	0.70	-0.3
3,058,783	-		Echvi_2578	0.70	-0.0
3,058,786	+		Echvi_2578	0.70	+0.0
3,058,787	-		Echvi_2578	0.70	-0.4
3,058,791	+		Echvi_2578	0.71	+0.2
3,058,893	+		Echvi_2578	0.87	-1.8
3,058,893	+		Echvi_2578	0.87	-0.1
3,058,897	+		Echvi_2578	0.88	-0.1
3,058,898	-		Echvi_2578	0.88	+0.5
3,058,898	-		Echvi_2578	0.88	-1.7
3,058,898	-		Echvi_2578	0.88	+1.0
3,058,898	-		Echvi_2578	0.88	-1.5
3,058,900	+		Echvi_2578	0.88	+0.8
3,058,901	-		Echvi_2578	0.88	-0.4
3,058,901	-		Echvi_2578	0.88	+0.6
3,058,901	-		Echvi_2578	0.88	+0.8
3,058,901	-		Echvi_2578	0.88	-2.1
3,058,902	+		Echvi_2578	0.89	-2.4
3,058,903	-		Echvi_2578	0.89	-0.7
3,058,908	+		Echvi_2578	0.89	-0.3
3,058,973	-				+1.0
3,059,020	+				+0.1
3,059,023	+				+0.0
3,059,023	+				+0.2
3,059,024	-				-0.0
3,059,065	+		Echvi_2579	0.13	+0.1
3,059,106	+		Echvi_2579	0.20	-2.1
3,059,176	+		Echvi_2579	0.32	-0.3
3,059,201	-		Echvi_2579	0.36	-0.1
3,059,206	-		Echvi_2579	0.37	-1.5
3,059,225	+		Echvi_2579	0.40	-0.4
3,059,226	-		Echvi_2579	0.41	-0.2
3,059,226	-		Echvi_2579	0.41	-0.2
3,059,226	-		Echvi_2579	0.41	-0.9
3,059,229	+		Echvi_2579	0.41	-0.1
3,059,230	-		Echvi_2579	0.41	-0.2
3,059,304	-		Echvi_2579	0.54	-1.5
3,059,307	+		Echvi_2579	0.54	+0.2
3,059,308	-		Echvi_2579	0.54	-0.3
3,059,308	-		Echvi_2579	0.54	+0.8
3,059,311	-		Echvi_2579	0.55	+0.6
3,059,311	-		Echvi_2579	0.55	-0.5
3,059,345	+		Echvi_2579	0.61	+1.8
3,059,367	+		Echvi_2579	0.64	+0.5
3,059,367	+		Echvi_2579	0.64	+0.7
3,059,368	-		Echvi_2579	0.65	-0.6
3,059,376	-		Echvi_2579	0.66	+2.2
3,059,497	-		Echvi_2579	0.86	+0.5
3,059,500	-		Echvi_2579	0.87	+0.7
3,059,502	-		Echvi_2579	0.87	-2.8
3,059,544	+				-0.2
3,059,545	-				-1.1
3,059,617	+				-0.1
3,059,683	+				+0.1
3,059,687	+				+0.5
3,059,688	-				-0.7
3,059,688	-				-2.0
3,059,688	-				-1.1
3,059,689	-				-0.2
3,059,694	-				-3.0
3,059,729	-				-0.5
3,059,742	-				-1.3
3,059,756	-		Echvi_2580	0.11	-0.4
3,059,765	-		Echvi_2580	0.12	-0.7
3,059,768	+		Echvi_2580	0.13	-0.5
3,059,770	+		Echvi_2580	0.13	+0.3
3,059,771	-		Echvi_2580	0.14	-0.4
3,059,936	+		Echvi_2580	0.42	-0.5
3,059,937	-		Echvi_2580	0.43	-1.8
3,059,954	-		Echvi_2580	0.46	-1.2
3,059,999	-		Echvi_2580	0.54	-0.7
3,059,999	-		Echvi_2580	0.54	-1.4
3,060,000	+		Echvi_2580	0.54	+0.2
3,060,000	+		Echvi_2580	0.54	-0.7
3,060,001	-		Echvi_2580	0.54	-0.2
3,060,036	-		Echvi_2580	0.60	-1.7
3,060,040	+		Echvi_2580	0.61	-0.0
3,060,040	+		Echvi_2580	0.61	-0.9
3,060,040	+		Echvi_2580	0.61	+0.1
3,060,040	+		Echvi_2580	0.61	-0.8
3,060,041	-		Echvi_2580	0.61	-0.5
3,060,041	-		Echvi_2580	0.61	-1.6
3,060,052	-		Echvi_2580	0.63	-0.4
3,060,058	+		Echvi_2580	0.64	-0.3
3,060,059	-		Echvi_2580	0.64	+0.8
3,060,118	+		Echvi_2580	0.74	-0.3
3,060,162	-		Echvi_2580	0.82	-0.5
3,060,162	-		Echvi_2580	0.82	+2.1
3,060,214	+				+0.5
3,060,216	+				-0.2
3,060,216	+				-0.9
3,060,217	-				-0.5
3,060,217	-				+0.3
3,060,217	-				-0.1
3,060,364	-				+1.0
3,060,364	-				+0.5
3,060,377	-				-0.5
3,060,392	+				-0.7
3,060,393	-				-0.1
3,060,413	+				+0.6
3,060,426	-				+0.1
3,060,437	+				-0.9
3,060,437	+				+0.8
3,060,438	-				-0.0
3,060,523	+		Echvi_2581	0.17	-0.7
3,060,524	-		Echvi_2581	0.17	-1.8
3,060,524	-		Echvi_2581	0.17	+0.8
3,060,562	+		Echvi_2581	0.22	-2.2
3,060,562	+		Echvi_2581	0.22	-1.1
3,060,563	-		Echvi_2581	0.22	-1.0
3,060,601	-		Echvi_2581	0.27	+0.7
3,060,638	+		Echvi_2581	0.32	-1.1
3,060,679	-		Echvi_2581	0.37	-0.2
3,060,721	+		Echvi_2581	0.42	+0.5
3,060,748	-		Echvi_2581	0.45	+0.6
3,060,752	+		Echvi_2581	0.46	+0.4
3,060,756	+		Echvi_2581	0.46	-1.2
3,060,756	+		Echvi_2581	0.46	-0.1
3,060,756	+		Echvi_2581	0.46	+0.0
3,060,756	+		Echvi_2581	0.46	-0.2
3,060,756	+		Echvi_2581	0.46	+1.8
3,060,757	-		Echvi_2581	0.46	+1.1
3,060,757	-		Echvi_2581	0.46	+1.3
3,060,757	-		Echvi_2581	0.46	-0.7
3,060,757	-		Echvi_2581	0.46	-2.0
3,060,757	-		Echvi_2581	0.46	-0.3
3,060,758	+		Echvi_2581	0.47	+0.1
3,060,759	-		Echvi_2581	0.47	+0.7
3,060,759	-		Echvi_2581	0.47	-1.4
3,060,768	+		Echvi_2581	0.48	-0.5
3,060,879	-		Echvi_2581	0.62	+0.4
3,060,930	+		Echvi_2581	0.68	-0.9
3,060,931	-		Echvi_2581	0.68	-0.2
3,060,932	+		Echvi_2581	0.68	-0.6
3,060,932	+		Echvi_2581	0.68	-0.3
3,060,932	+		Echvi_2581	0.68	-0.2
3,060,933	-		Echvi_2581	0.68	-0.2
3,060,933	-		Echvi_2581	0.68	-0.5
3,060,979	+		Echvi_2581	0.74	+0.8
3,060,979	+		Echvi_2581	0.74	+0.6
3,060,984	-		Echvi_2581	0.75	-0.1
3,060,996	+		Echvi_2581	0.76	-0.0
3,060,997	-		Echvi_2581	0.76	+0.6
3,060,997	-		Echvi_2581	0.76	-0.1
3,060,997	-		Echvi_2581	0.76	-0.1
3,061,015	-		Echvi_2581	0.79	+0.1
3,061,071	-		Echvi_2581	0.86	-0.0
3,061,109	-				+0.4
3,061,184	-				-0.2
3,061,184	-				-0.1
3,061,184	-				+0.4