Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1701

Experiment: D-Cellobiose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cellobiose (C)
1,998,929	-		Echvi_1700	0.67	-1.4
1,998,934	-		Echvi_1700	0.67	+0.4
1,998,934	-		Echvi_1700	0.67	+1.3
1,998,934	-		Echvi_1700	0.67	+0.6
1,998,947	+		Echvi_1700	0.68	-0.5
1,999,099	+		Echvi_1700	0.79	+0.6
1,999,099	+		Echvi_1700	0.79	-0.2
1,999,187	-		Echvi_1700	0.85	+1.0
1,999,293	-				-0.6
1,999,293	-				-0.0
1,999,297	-				-0.3
1,999,417	+				-0.2
1,999,418	-				-0.2
1,999,423	+				+0.6
1,999,424	-				-2.4
1,999,424	-				+0.3
1,999,474	-				+0.6
1,999,474	-				-2.0
1,999,474	-				-0.7
1,999,749	-				-1.4
1,999,829	-				-1.0
1,999,892	-				-1.3
1,999,962	-				-1.8
1,999,964	+				+0.5
1,999,974	-				+1.2
1,999,974	-				+0.2
1,999,977	+				+1.2
1,999,977	+				-1.3
1,999,977	+				-0.3
1,999,977	+				+0.2
1,999,977	+				-1.9
1,999,980	-				-0.5
2,000,027	+				-0.2
2,000,027	+				+2.7
2,000,028	-				-0.3
2,000,048	-		Echvi_1701	0.11	+1.8
2,000,048	-		Echvi_1701	0.11	+1.0
2,000,078	-		Echvi_1701	0.14	+0.5
2,000,078	-		Echvi_1701	0.14	+0.7
2,000,081	+		Echvi_1701	0.14	+1.3
2,000,081	+		Echvi_1701	0.14	+1.9
2,000,081	+		Echvi_1701	0.14	+0.3
2,000,081	+		Echvi_1701	0.14	+0.5
2,000,082	-		Echvi_1701	0.14	+1.3
2,000,082	-		Echvi_1701	0.14	-0.4
2,000,082	-		Echvi_1701	0.14	-0.1
2,000,082	-		Echvi_1701	0.14	+0.3
2,000,085	+		Echvi_1701	0.14	-1.5
2,000,085	+		Echvi_1701	0.14	+0.9
2,000,112	+		Echvi_1701	0.17	-1.8
2,000,112	+		Echvi_1701	0.17	+0.6
2,000,116	+		Echvi_1701	0.17	+1.0
2,000,116	+		Echvi_1701	0.17	+0.7
2,000,117	-		Echvi_1701	0.17	+0.0
2,000,120	+		Echvi_1701	0.17	-0.4
2,000,120	+		Echvi_1701	0.17	+0.7
2,000,120	+		Echvi_1701	0.17	-2.2
2,000,120	+		Echvi_1701	0.17	+0.5
2,000,121	-		Echvi_1701	0.17	-1.0
2,000,121	-		Echvi_1701	0.17	+1.1
2,000,121	-		Echvi_1701	0.17	+0.3
2,000,121	-		Echvi_1701	0.17	+0.0
2,000,121	-		Echvi_1701	0.17	-0.2
2,000,142	-		Echvi_1701	0.19	+0.8
2,000,142	-		Echvi_1701	0.19	-0.5
2,000,159	-		Echvi_1701	0.21	-1.8
2,000,207	+		Echvi_1701	0.25	+0.2
2,000,208	-		Echvi_1701	0.25	+0.3
2,000,208	-		Echvi_1701	0.25	+0.3
2,000,209	+		Echvi_1701	0.25	-0.1
2,000,209	+		Echvi_1701	0.25	-1.4
2,000,209	+		Echvi_1701	0.25	-1.6
2,000,209	+		Echvi_1701	0.25	+1.4
2,000,209	+		Echvi_1701	0.25	+0.1
2,000,209	+		Echvi_1701	0.25	+0.3
2,000,210	-		Echvi_1701	0.25	-0.5
2,000,210	-		Echvi_1701	0.25	+0.3
2,000,210	-		Echvi_1701	0.25	+0.1
2,000,210	-		Echvi_1701	0.25	-1.4
2,000,250	+		Echvi_1701	0.29	-0.7
2,000,250	+		Echvi_1701	0.29	+0.8
2,000,250	+		Echvi_1701	0.29	+1.8
2,000,250	+		Echvi_1701	0.29	-1.7
2,000,251	-		Echvi_1701	0.29	+0.5
2,000,251	-		Echvi_1701	0.29	+1.1
2,000,251	-		Echvi_1701	0.29	-1.4
2,000,251	-		Echvi_1701	0.29	+0.3
2,000,252	+		Echvi_1701	0.29	-1.4
2,000,252	+		Echvi_1701	0.29	-0.5
2,000,253	-		Echvi_1701	0.29	-1.0
2,000,253	-		Echvi_1701	0.29	-0.5
2,000,284	+		Echvi_1701	0.32	+0.4
2,000,284	+		Echvi_1701	0.32	+0.3
2,000,285	-		Echvi_1701	0.32	-0.2
2,000,289	-		Echvi_1701	0.32	+0.2
2,000,289	-		Echvi_1701	0.32	+1.0
2,000,293	+		Echvi_1701	0.32	-0.1
2,000,294	-		Echvi_1701	0.32	-0.3
2,000,306	+		Echvi_1701	0.34	+1.1
2,000,306	+		Echvi_1701	0.34	+0.5
2,000,315	+		Echvi_1701	0.34	-0.1
2,000,316	-		Echvi_1701	0.34	+0.4
2,000,316	-		Echvi_1701	0.34	-0.7
2,000,340	-		Echvi_1701	0.36	-1.0
2,000,347	+		Echvi_1701	0.37	+0.7
2,000,347	+		Echvi_1701	0.37	-1.6
2,000,347	+		Echvi_1701	0.37	+0.1
2,000,348	-		Echvi_1701	0.37	-0.1
2,000,360	+		Echvi_1701	0.38	-0.7
2,000,360	+		Echvi_1701	0.38	+2.1
2,000,360	+		Echvi_1701	0.38	-2.8
2,000,360	+		Echvi_1701	0.38	-0.6
2,000,361	-		Echvi_1701	0.38	-1.5
2,000,361	-		Echvi_1701	0.38	-2.8
2,000,361	-		Echvi_1701	0.38	-0.7
2,000,374	+		Echvi_1701	0.39	+0.5
2,000,374	+		Echvi_1701	0.39	+1.3
2,000,375	-		Echvi_1701	0.40	-0.1
2,000,376	+		Echvi_1701	0.40	+1.0
2,000,377	-		Echvi_1701	0.40	+0.0
2,000,378	+		Echvi_1701	0.40	+1.4
2,000,384	+		Echvi_1701	0.40	-0.8
2,000,409	-		Echvi_1701	0.43	+0.0
2,000,409	-		Echvi_1701	0.43	-0.4
2,000,409	-		Echvi_1701	0.43	+1.0
2,000,413	+		Echvi_1701	0.43	+0.5
2,000,414	-		Echvi_1701	0.43	+0.9
2,000,533	+		Echvi_1701	0.53	+0.6
2,000,533	+		Echvi_1701	0.53	+1.4
2,000,533	+		Echvi_1701	0.53	-0.2
2,000,533	+		Echvi_1701	0.53	+0.3
2,000,533	+		Echvi_1701	0.53	+0.9
2,000,534	-		Echvi_1701	0.53	-0.7
2,000,534	-		Echvi_1701	0.53	+0.6
2,000,534	-		Echvi_1701	0.53	+0.4
2,000,627	-		Echvi_1701	0.62	-0.9
2,000,640	-		Echvi_1701	0.63	+0.3
2,000,640	-		Echvi_1701	0.63	+1.5
2,000,646	+		Echvi_1701	0.63	-0.8
2,000,647	-		Echvi_1701	0.63	-1.4
2,000,651	-		Echvi_1701	0.64	+0.7
2,000,686	-		Echvi_1701	0.67	+1.0
2,000,697	-		Echvi_1701	0.68	+0.2
2,000,714	+		Echvi_1701	0.69	-0.8
2,000,714	+		Echvi_1701	0.69	+0.1
2,000,715	-		Echvi_1701	0.69	+2.2
2,000,779	+		Echvi_1701	0.75	+1.3
2,000,780	-		Echvi_1701	0.75	+1.4
2,000,783	+		Echvi_1701	0.75	+0.4
2,000,784	-		Echvi_1701	0.75	-0.5
2,000,784	-		Echvi_1701	0.75	+0.2
2,000,872	+		Echvi_1701	0.83	-1.3
2,000,872	+		Echvi_1701	0.83	+0.3
2,000,873	-		Echvi_1701	0.83	-0.3
2,000,881	+		Echvi_1701	0.84	-1.4
2,000,882	-		Echvi_1701	0.84	+0.4
2,000,884	-		Echvi_1701	0.84	+1.1
2,000,898	-		Echvi_1701	0.85	-0.6
2,000,941	+		Echvi_1701	0.89	-0.0
2,000,941	+		Echvi_1701	0.89	-0.3
2,000,941	+		Echvi_1701	0.89	-0.5
2,000,942	-		Echvi_1701	0.89	+0.0
2,000,951	+				+0.2
2,000,952	-				+0.0
2,000,952	-				-0.3
2,000,952	-				-0.0
2,000,957	-				+0.3
2,000,985	-				-0.5
2,001,014	+				+0.9
2,001,015	-				-0.1
2,001,015	-				+0.6
2,001,022	-				+1.2
2,001,022	-				+1.5
2,001,022	-				-0.1
2,001,047	-				-0.6
2,001,113	-				+0.6
2,001,214	+				-0.2
2,001,228	-				+0.6
2,001,232	-				-0.8
2,001,232	-				+0.7
2,001,259	+				+0.0
2,001,259	+				-1.1
2,001,260	-				-1.0
2,001,260	-				+0.4
2,001,262	+				-0.3
2,001,263	-				+0.1
2,001,328	+				+0.6
2,001,328	+				+1.2
2,001,403	-				+1.6
2,001,458	+				-2.2
2,001,490	+				-1.4
2,001,491	-				+1.1
2,001,491	-				-0.3
2,001,491	-				+0.0
2,001,493	+				-0.6
2,001,493	+				+0.0
2,001,493	+				-0.1
2,001,494	-				+0.5
2,001,494	-				+0.2
2,001,494	-				+1.2
2,001,494	-				+0.3
2,001,494	-				+0.0
2,001,608	+		Echvi_1702	0.14	-0.8
2,001,609	-		Echvi_1702	0.14	-0.3
2,001,609	-		Echvi_1702	0.14	+0.2
2,001,609	-		Echvi_1702	0.14	-0.5
2,001,640	-		Echvi_1702	0.15	-1.0
2,001,640	-		Echvi_1702	0.15	-2.1
2,001,663	+		Echvi_1702	0.16	+0.4
2,001,708	+		Echvi_1702	0.18	-1.4
2,001,708	+		Echvi_1702	0.18	-1.9
2,001,709	-		Echvi_1702	0.18	-0.6
2,001,709	-		Echvi_1702	0.18	-0.2
2,001,709	-		Echvi_1702	0.18	+2.1
2,001,802	+		Echvi_1702	0.22	-1.4
2,001,803	-		Echvi_1702	0.22	-0.7
2,001,803	-		Echvi_1702	0.22	+0.7
2,001,806	+		Echvi_1702	0.22	+1.9
2,001,807	-		Echvi_1702	0.22	+0.2
2,001,889	-		Echvi_1702	0.25	-0.0
2,001,985	+		Echvi_1702	0.29	+0.7
2,001,985	+		Echvi_1702	0.29	-0.7
2,001,986	-		Echvi_1702	0.29	-0.8
2,001,989	-		Echvi_1702	0.29	-0.3
2,001,989	-		Echvi_1702	0.29	-0.4
2,002,039	-		Echvi_1702	0.31	-0.6