Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1559

Experiment: D-Cellobiose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cellobiose (C)
1,787,524	+		Echvi_1558	0.32	+1.6
1,787,525	-		Echvi_1558	0.32	-0.3
1,787,527	+		Echvi_1558	0.32	+0.6
1,787,527	+		Echvi_1558	0.32	+1.5
1,787,536	+		Echvi_1558	0.33	+0.6
1,787,539	+		Echvi_1558	0.33	-0.9
1,787,539	+		Echvi_1558	0.33	-0.6
1,787,540	-		Echvi_1558	0.33	+0.7
1,787,540	-		Echvi_1558	0.33	-0.4
1,787,639	-		Echvi_1558	0.41	-1.9
1,787,662	+		Echvi_1558	0.43	+0.2
1,787,662	+		Echvi_1558	0.43	+0.0
1,787,663	-		Echvi_1558	0.43	+0.5
1,787,663	-		Echvi_1558	0.43	-0.6
1,787,712	-		Echvi_1558	0.47	+1.4
1,787,746	-		Echvi_1558	0.50	-1.0
1,787,753	+		Echvi_1558	0.50	-0.7
1,787,812	+		Echvi_1558	0.55	+1.1
1,787,826	+		Echvi_1558	0.56	+1.7
1,787,827	-		Echvi_1558	0.56	+0.8
1,788,025	-		Echvi_1558	0.71	+1.5
1,788,048	+		Echvi_1558	0.73	+1.4
1,788,048	+		Echvi_1558	0.73	+0.8
1,788,049	-		Echvi_1558	0.73	+2.4
1,788,049	-		Echvi_1558	0.73	+0.3
1,788,049	-		Echvi_1558	0.73	+0.2
1,788,049	-		Echvi_1558	0.73	-0.1
1,788,059	+		Echvi_1558	0.74	-0.9
1,788,059	+		Echvi_1558	0.74	-0.2
1,788,059	+		Echvi_1558	0.74	+0.4
1,788,060	-		Echvi_1558	0.74	-0.4
1,788,112	+		Echvi_1558	0.78	-0.0
1,788,113	-		Echvi_1558	0.78	-0.6
1,788,124	+		Echvi_1558	0.79	-1.3
1,788,125	-		Echvi_1558	0.79	+0.4
1,788,125	-		Echvi_1558	0.79	+0.9
1,788,125	-		Echvi_1558	0.79	+0.0
1,788,132	+		Echvi_1558	0.80	+0.0
1,788,132	+		Echvi_1558	0.80	+1.7
1,788,133	-		Echvi_1558	0.80	-0.5
1,788,145	+		Echvi_1558	0.81	-1.4
1,788,146	-		Echvi_1558	0.81	-0.1
1,788,149	+		Echvi_1558	0.81	-0.0
1,788,150	-		Echvi_1558	0.81	-1.1
1,788,157	+		Echvi_1558	0.82	-1.6
1,788,198	+		Echvi_1558	0.85	-0.9
1,788,198	+		Echvi_1558	0.85	+0.8
1,788,250	-		Echvi_1558	0.89	-0.4
1,788,286	+				+1.4
1,788,315	+				-1.7
1,788,316	-				-0.6
1,788,316	-				-0.6
1,788,390	-				-0.6
1,788,403	-				+3.0
1,788,403	-				+3.0
1,788,404	+				+0.7
1,788,404	+				+0.1
1,788,405	-				-0.3
1,788,405	-				-2.2
1,788,463	+				-0.0
1,788,464	-				+0.3
1,788,468	+				-0.2
1,788,471	+				+0.9
1,788,471	+				+0.5
1,788,528	+				+1.4
1,788,590	+				+0.3
1,788,705	-				+0.4
1,788,705	-				-1.9
1,788,705	-				+0.2
1,788,726	+				-1.1
1,788,824	+		Echvi_1559	0.12	-0.5
1,788,994	+		Echvi_1559	0.18	-0.6
1,789,001	-		Echvi_1559	0.18	+0.3
1,789,001	-		Echvi_1559	0.18	-0.1
1,789,001	-		Echvi_1559	0.18	-0.7
1,789,001	-		Echvi_1559	0.18	-0.0
1,789,024	+		Echvi_1559	0.19	+2.0
1,789,119	+		Echvi_1559	0.22	+2.1
1,789,122	+		Echvi_1559	0.22	+0.1
1,789,122	+		Echvi_1559	0.22	+1.2
1,789,122	+		Echvi_1559	0.22	+1.5
1,789,123	-		Echvi_1559	0.22	+0.4
1,789,123	-		Echvi_1559	0.22	+0.8
1,789,125	+		Echvi_1559	0.22	+0.8
1,789,125	+		Echvi_1559	0.22	+2.7
1,789,126	-		Echvi_1559	0.22	+0.7
1,789,130	+				-0.2
1,789,130	+		Echvi_1559	0.22	-0.1
1,789,130	+		Echvi_1559	0.22	-1.1
1,789,131	-		Echvi_1559	0.22	-1.0
1,789,131	-		Echvi_1559	0.22	+1.4
1,789,243	+		Echvi_1559	0.26	-1.0
1,789,246	-		Echvi_1559	0.26	+0.6
1,789,246	-		Echvi_1559	0.26	-1.3
1,789,273	+		Echvi_1559	0.27	+0.2
1,789,273	+		Echvi_1559	0.27	+3.5
1,789,274	-		Echvi_1559	0.27	-1.1
1,789,274	-		Echvi_1559	0.27	-0.2
1,789,283	+		Echvi_1559	0.28	-2.0
1,789,284	-		Echvi_1559	0.28	+1.0
1,789,290	+		Echvi_1559	0.28	-1.0
1,789,297	-		Echvi_1559	0.28	-1.7
1,789,333	-		Echvi_1559	0.29	-2.2
1,789,411	+		Echvi_1559	0.32	-1.1
1,789,412	-		Echvi_1559	0.32	+0.8
1,789,412	-		Echvi_1559	0.32	+0.8
1,789,426	-		Echvi_1559	0.33	+2.0
1,789,470	-		Echvi_1559	0.34	-2.7
1,789,537	+		Echvi_1559	0.36	+0.1
1,789,537	+		Echvi_1559	0.36	-0.7
1,789,556	-		Echvi_1559	0.37	+1.9
1,789,573	+		Echvi_1559	0.38	+0.3
1,789,573	+		Echvi_1559	0.38	+1.9
1,789,591	+				+0.4
1,789,591	+		Echvi_1559	0.38	+1.2
1,789,591	+		Echvi_1559	0.38	+0.8
1,789,591	+		Echvi_1559	0.38	+1.4
1,789,663	+		Echvi_1559	0.41	+0.6
1,789,708	+		Echvi_1559	0.42	+1.0
1,789,709	-		Echvi_1559	0.42	-0.8
1,789,711	-		Echvi_1559	0.42	+1.1
1,789,725	+		Echvi_1559	0.43	-1.8
1,789,731	+		Echvi_1559	0.43	+0.6
1,789,767	+		Echvi_1559	0.44	-0.4
1,789,767	+		Echvi_1559	0.44	+0.0
1,789,772	+		Echvi_1559	0.44	+1.8
1,789,794	+		Echvi_1559	0.45	+0.6
1,789,794	+		Echvi_1559	0.45	-0.2
1,789,830	+		Echvi_1559	0.46	+0.3
1,789,830	+		Echvi_1559	0.46	+0.9
1,789,831	-		Echvi_1559	0.47	-0.6
1,789,831	-		Echvi_1559	0.47	-2.2
1,789,833	+		Echvi_1559	0.47	+0.3
1,789,840	+		Echvi_1559	0.47	+0.0
1,789,840	+		Echvi_1559	0.47	-0.7
1,789,841	-		Echvi_1559	0.47	+0.9
1,789,885	-		Echvi_1559	0.48	-0.5
1,789,915	-		Echvi_1559	0.49	-0.4
1,789,915	-		Echvi_1559	0.49	-0.5
1,789,962	-		Echvi_1559	0.51	+0.4
1,789,989	+		Echvi_1559	0.52	+1.6
1,789,990	-		Echvi_1559	0.52	-0.4
1,790,009	+		Echvi_1559	0.53	-0.2
1,790,010	-		Echvi_1559	0.53	-0.4
1,790,026	-		Echvi_1559	0.53	+0.8
1,790,049	+		Echvi_1559	0.54	+1.8
1,790,050	-		Echvi_1559	0.54	-2.1
1,790,050	-		Echvi_1559	0.54	-1.6
1,790,128	+		Echvi_1559	0.57	+0.8
1,790,128	+		Echvi_1559	0.57	+1.1
1,790,128	+		Echvi_1559	0.57	-0.1
1,790,128	+		Echvi_1559	0.57	-0.4
1,790,129	-		Echvi_1559	0.57	-0.4
1,790,129	-		Echvi_1559	0.57	-0.0
1,790,129	-		Echvi_1559	0.57	-0.8
1,790,130	+		Echvi_1559	0.57	-0.6
1,790,130	+		Echvi_1559	0.57	-0.7
1,790,131	-		Echvi_1559	0.57	-0.5
1,790,134	+		Echvi_1559	0.57	-0.5
1,790,135	-		Echvi_1559	0.57	+0.3
1,790,225	+		Echvi_1559	0.60	-0.2
1,790,311	+		Echvi_1559	0.63	+0.3
1,790,312	-		Echvi_1559	0.63	+0.2
1,790,312	-		Echvi_1559	0.63	+1.4
1,790,341	+		Echvi_1559	0.64	+0.9
1,790,350	-		Echvi_1559	0.64	-1.1
1,790,388	-		Echvi_1559	0.66	+1.2
1,790,416	+		Echvi_1559	0.67	-1.3
1,790,417	-		Echvi_1559	0.67	+0.3
1,790,417	-		Echvi_1559	0.67	-1.7
1,790,417	-		Echvi_1559	0.67	-0.9
1,790,419	+		Echvi_1559	0.67	-1.5
1,790,419	+		Echvi_1559	0.67	-1.4
1,790,420	-		Echvi_1559	0.67	+0.2
1,790,628	-		Echvi_1559	0.74	-0.1
1,790,682	+		Echvi_1559	0.76	+0.6
1,790,801	+		Echvi_1559	0.80	+3.0
1,790,801	+		Echvi_1559	0.80	-1.0
1,790,873	+		Echvi_1559	0.83	-0.3
1,790,873	+		Echvi_1559	0.83	+1.0
1,790,874	-		Echvi_1559	0.83	-1.3
1,790,950	-		Echvi_1559	0.85	+1.0
1,790,981	+		Echvi_1559	0.86	+1.8
1,791,055	+		Echvi_1559	0.89	+1.9
1,791,055	+		Echvi_1559	0.89	-0.2
1,791,056	-		Echvi_1559	0.89	+0.4
1,791,056	-		Echvi_1559	0.89	+0.5
1,791,057	+				+0.0
1,791,114	-				+0.0
1,791,115	+				-0.0
1,791,118	+				-0.4
1,791,119	-				-1.0
1,791,119	-				-0.2
1,791,119	-				+0.2
1,791,119	-				-1.4
1,791,121	-				-0.3
1,791,136	-				+0.9
1,791,175	+				-0.4
1,791,176	-				-0.8
1,791,177	+				+0.0
1,791,178	-				+1.4
1,791,198	-				+0.1
1,791,276	+				+2.4
1,791,277	-				-0.2
1,791,302	-				-0.3
1,791,362	+				-0.2
1,791,362	+				-0.9
1,791,363	-				-0.2
1,791,394	-				+1.4
1,791,398	-				-0.1
1,791,402	-				+3.4
1,791,418	-				+1.4
1,791,418	-				+0.6
1,791,420	-				-0.3
1,791,431	+				-0.6
1,791,434	+				+1.3
1,791,434	+				+0.1
1,791,435	-				-1.4
1,791,483	+				+1.4
1,791,518	+				+0.5
1,791,529	+				-0.4
1,791,541	-				-1.6
1,791,541	-				-0.8
1,791,541	-				+0.2
1,791,541	-				-0.4
1,791,564	+				+1.6
1,791,565	-				+0.1
1,791,570	-				-1.0
1,791,570	-				+2.0
1,791,582	+				+0.6
1,791,583	-				-1.3
1,791,585	+				+2.1
1,791,585	+				-0.9
1,791,586	-				+0.2
1,791,597	+				+0.6
1,791,597	+				-0.6
1,791,597	+				-2.7
1,791,599	+				+2.4
1,791,599	+				+0.7
1,791,599	+				-0.3
1,791,600	-				-1.2
1,791,600	-				+1.2
1,791,607	-				-1.6
1,791,607	-				-0.7
1,791,735	+				+0.6
1,791,735	+				-0.4
1,791,735	+				-0.5
1,791,735	+				-1.0
1,791,736	-				-0.4
1,791,736	-				+0.4
1,791,824	-				-0.4
1,791,846	+				-1.0
1,791,846	+				+0.4
1,791,846	+				-1.0
1,791,846	+				+1.0
1,791,846	+				+0.4
1,791,846	+				+0.0
1,791,860	-				-2.5
1,791,985	+				+0.0
1,791,986	-				-0.2
1,791,986	-				-0.8
1,791,986	-				+0.9
1,792,006	+				-0.8
1,792,006	+				-0.4
1,792,006	+				-0.6
1,792,048	+				-1.2
1,792,049	-				+0.5
1,792,049	-				-1.7
1,792,049	-				-0.4
1,792,099	-		Echvi_1560	0.11	+0.7
1,792,150	+		Echvi_1560	0.13	+1.2
1,792,153	-		Echvi_1560	0.13	+0.4
1,792,243	+		Echvi_1560	0.16	+1.4
1,792,243	+		Echvi_1560	0.16	-0.6
1,792,243	+		Echvi_1560	0.16	-0.1
1,792,243	+		Echvi_1560	0.16	-0.6
1,792,244	-		Echvi_1560	0.16	-0.4
1,792,252	-		Echvi_1560	0.16	+0.5
1,792,284	+		Echvi_1560	0.17	+0.2
1,792,305	+		Echvi_1560	0.17	+0.7
1,792,360	+		Echvi_1560	0.19	-0.2
1,792,361	-		Echvi_1560	0.19	-0.7
1,792,361	-		Echvi_1560	0.19	-1.2
1,792,362	+		Echvi_1560	0.19	+0.0