Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1293

Experiment: D-Cellobiose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cellobiose (C)
1,486,352	+				+0.3
1,486,353	-				-0.1
1,486,391	+				-0.2
1,486,392	-				+1.6
1,486,392	-				+0.9
1,486,392	-				+1.4
1,486,515	+				+1.4
1,486,516	-				+0.3
1,486,516	-				+0.8
1,486,519	-				-0.3
1,486,519	-				-1.0
1,486,521	-				+1.2
1,486,521	-				-0.6
1,486,579	+				-0.5
1,486,580	-				-3.5
1,486,609	+				-1.4
1,486,609	+				-0.0
1,486,618	-				+1.0
1,486,618	-				-1.9
1,486,734	-		Echvi_1292	0.12	+0.6
1,486,751	-		Echvi_1292	0.14	-0.6
1,486,778	-		Echvi_1292	0.18	+0.9
1,486,829	+		Echvi_1292	0.25	-0.5
1,486,829	+		Echvi_1292	0.25	+0.6
1,486,830	-		Echvi_1292	0.26	+0.9
1,486,832	+		Echvi_1292	0.26	-0.5
1,486,833	-		Echvi_1292	0.26	-0.4
1,486,878	+		Echvi_1292	0.32	-0.4
1,486,921	+		Echvi_1292	0.39	+1.6
1,486,922	-		Echvi_1292	0.39	+0.1
1,486,922	-		Echvi_1292	0.39	-1.7
1,486,922	-		Echvi_1292	0.39	+1.9
1,486,926	+		Echvi_1292	0.39	+0.1
1,486,949	-		Echvi_1292	0.43	+0.5
1,487,033	+		Echvi_1292	0.55	-0.3
1,487,034	-		Echvi_1292	0.55	+1.1
1,487,034	-		Echvi_1292	0.55	-0.9
1,487,049	-		Echvi_1292	0.57	-1.0
1,487,050	+		Echvi_1292	0.57	-0.5
1,487,050	+		Echvi_1292	0.57	-0.2
1,487,050	+		Echvi_1292	0.57	+0.0
1,487,051	-		Echvi_1292	0.57	+0.1
1,487,051	-		Echvi_1292	0.57	+0.8
1,487,051	-		Echvi_1292	0.57	+3.8
1,487,109	-		Echvi_1292	0.65	+1.1
1,487,163	-		Echvi_1292	0.73	+0.6
1,487,209	+		Echvi_1292	0.80	-1.1
1,487,210	-		Echvi_1292	0.80	+0.0
1,487,288	-				+0.1
1,487,300	+				-0.5
1,487,301	-				-1.7
1,487,301	-				-0.4
1,487,331	+				-0.1
1,487,331	+				+0.9
1,487,331	+				+0.4
1,487,331	+				-0.4
1,487,331	+				-0.6
1,487,374	+				-1.0
1,487,374	+				+0.3
1,487,374	+				+1.3
1,487,380	+				-1.1
1,487,380	+				+0.1
1,487,405	+				-0.8
1,487,422	+				+1.2
1,487,448	+				+0.9
1,487,448	+				-0.7
1,487,597	+		Echvi_1293	0.15	-0.0
1,487,597	+		Echvi_1293	0.15	+0.4
1,487,609	+		Echvi_1293	0.16	-0.4
1,487,611	+		Echvi_1293	0.16	-1.2
1,487,612	-		Echvi_1293	0.16	-1.4
1,487,698	-		Echvi_1293	0.21	+1.4
1,487,708	+		Echvi_1293	0.21	-0.9
1,487,726	+		Echvi_1293	0.23	+0.5
1,487,861	+		Echvi_1293	0.31	-0.1
1,487,893	+		Echvi_1293	0.32	+0.6
1,487,960	+		Echvi_1293	0.36	+2.4
1,488,016	+		Echvi_1293	0.40	+0.4
1,488,083	+		Echvi_1293	0.44	-0.1
1,488,083	+		Echvi_1293	0.44	-0.3
1,488,212	+		Echvi_1293	0.51	-1.2
1,488,262	+		Echvi_1293	0.54	+0.8
1,488,286	+		Echvi_1293	0.56	+2.4
1,488,528	+		Echvi_1293	0.70	-0.1
1,488,529	-		Echvi_1293	0.70	-0.7
1,488,529	-		Echvi_1293	0.70	+0.0
1,488,529	-		Echvi_1293	0.70	+0.3
1,488,576	+		Echvi_1293	0.73	+0.4
1,488,597	+		Echvi_1293	0.74	+0.0
1,488,676	+		Echvi_1293	0.79	-1.0
1,488,676	+		Echvi_1293	0.79	+0.5
1,488,688	+		Echvi_1293	0.80	-0.4
1,488,709	+		Echvi_1293	0.81	-1.5
1,488,709	+		Echvi_1293	0.81	-0.7
1,488,710	-		Echvi_1293	0.81	-0.8
1,488,806	+		Echvi_1293	0.87	+0.6
1,488,806	+		Echvi_1293	0.87	-0.5
1,488,807	-		Echvi_1293	0.87	+1.0
1,488,844	+		Echvi_1293	0.89	-0.0
1,488,850	+		Echvi_1293	0.89	-0.8
1,488,851	-		Echvi_1293	0.89	+0.5
1,488,877	+				-0.7
1,488,910	+				+0.4
1,488,933	+				-0.5
1,488,935	+				-1.1
1,488,935	+				-0.5
1,488,935	+				+0.3
1,488,936	-				-1.1
1,488,987	+				+0.2
1,488,990	+				+0.8
1,489,040	+				-0.4
1,489,091	+				+0.1
1,489,125	-				+0.4
1,489,267	+				-1.0
1,489,304	-				+1.4
1,489,336	-		Echvi_1294	0.12	-0.5
1,489,358	+		Echvi_1294	0.16	-0.5
1,489,358	+		Echvi_1294	0.16	-0.3
1,489,359	-		Echvi_1294	0.16	+1.4
1,489,359	-		Echvi_1294	0.16	-2.3
1,489,361	+		Echvi_1294	0.16	-1.5
1,489,361	+		Echvi_1294	0.16	-0.9
1,489,365	+		Echvi_1294	0.17	+0.4
1,489,366	-		Echvi_1294	0.17	-1.1
1,489,371	+		Echvi_1294	0.18	-0.7
1,489,371	+		Echvi_1294	0.18	-1.0
1,489,393	-		Echvi_1294	0.21	+0.7
1,489,415	+		Echvi_1294	0.25	-0.6
1,489,415	+		Echvi_1294	0.25	+1.6
1,489,415	+		Echvi_1294	0.25	+0.0
1,489,415	+		Echvi_1294	0.25	+0.2
1,489,415	+		Echvi_1294	0.25	+0.9
1,489,416	-		Echvi_1294	0.25	+0.9
1,489,416	-		Echvi_1294	0.25	-0.7
1,489,416	-		Echvi_1294	0.25	+0.2
1,489,416	-		Echvi_1294	0.25	-1.6
1,489,540	+		Echvi_1294	0.44	-0.9
1,489,550	+		Echvi_1294	0.46	-0.1
1,489,550	+		Echvi_1294	0.46	-1.6
1,489,550	+		Echvi_1294	0.46	-0.7
1,489,551	-		Echvi_1294	0.46	-0.4
1,489,551	-		Echvi_1294	0.46	-1.1
1,489,555	+		Echvi_1294	0.47	-0.7
1,489,555	+		Echvi_1294	0.47	+0.4
1,489,556	-		Echvi_1294	0.47	-1.1
1,489,556	-		Echvi_1294	0.47	+1.2
1,489,562	-		Echvi_1294	0.48	-0.1
1,489,609	-		Echvi_1294	0.55	+0.3
1,489,652	-		Echvi_1294	0.62	+0.4
1,489,742	+		Echvi_1294	0.76	+0.9
1,489,743	-		Echvi_1294	0.76	+0.3
1,489,744	+		Echvi_1294	0.77	+2.4
1,489,744	+		Echvi_1294	0.77	-1.4
1,489,745	-		Echvi_1294	0.77	+0.3
1,489,854	+				+0.2
1,489,854	+				+0.5
1,489,854	+				+0.2
1,489,855	-				-1.4
1,489,855	-				+0.3
1,489,972	+				+0.2
1,489,973	-				+0.9
1,489,973	-				-1.2
1,489,986	+				+0.1
1,489,986	+				-0.0
1,489,987	-				-2.3
1,489,987	-				-0.9
1,489,988	+				+0.5
1,489,988	+				-0.1
1,489,989	-				-3.2
1,489,989	-				-2.5
1,489,993	-				-1.7
1,489,995	+				+0.1
1,490,003	+				+0.6
1,490,003	+				-0.3
1,490,003	+				-0.8
1,490,004	-				-0.4
1,490,004	-				-3.5
1,490,004	-				-0.1
1,490,004	-				-2.5
1,490,004	-				-1.5
1,490,004	-				-2.5