Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0138

Experiment: D-Cellobiose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cellobiose (C)
137,564	+				-0.2
137,566	+				-0.8
137,568	+				-0.0
137,596	+				+0.7
137,597	-				+1.3
137,669	+				+1.0
137,670	-				-0.8
137,670	-				+1.2
137,670	-				+0.5
137,672	-				-0.4
137,703	-				+0.5
137,755	+		Echvi_0138	0.12	+0.4
137,755	+		Echvi_0138	0.12	-0.5
137,756	-		Echvi_0138	0.12	+0.8
137,777	+		Echvi_0138	0.14	-0.9
137,847	-		Echvi_0138	0.19	-0.4
137,859	-		Echvi_0138	0.20	+1.4
137,900	+		Echvi_0138	0.23	+1.4
137,958	+		Echvi_0138	0.27	+0.6
137,958	+		Echvi_0138	0.27	+1.1
137,959	-		Echvi_0138	0.28	-0.1
137,959	-		Echvi_0138	0.28	+0.8
137,966	+		Echvi_0138	0.28	-1.8
137,967	-		Echvi_0138	0.28	-1.7
137,986	+		Echvi_0138	0.30	-0.6
137,987	-		Echvi_0138	0.30	+0.0
138,029	+		Echvi_0138	0.33	-1.3
138,029	+		Echvi_0138	0.33	-0.7
138,029	+		Echvi_0138	0.33	-0.5
138,029	+		Echvi_0138	0.33	+1.3
138,030	-		Echvi_0138	0.33	-1.6
138,030	-		Echvi_0138	0.33	+0.2
138,030	-		Echvi_0138	0.33	-0.7
138,030	-		Echvi_0138	0.33	+1.6
138,030	-		Echvi_0138	0.33	+0.7
138,030	-		Echvi_0138	0.33	-0.1
138,030	-		Echvi_0138	0.33	+0.5
138,030	-		Echvi_0138	0.33	+0.3
138,030	-		Echvi_0138	0.33	-0.7
138,031	+		Echvi_0138	0.33	+1.2
138,031	+		Echvi_0138	0.33	-0.5
138,031	+		Echvi_0138	0.33	+1.9
138,032	-		Echvi_0138	0.33	+0.6
138,050	+		Echvi_0138	0.34	-0.2
138,051	-		Echvi_0138	0.35	-0.8
138,092	+		Echvi_0138	0.38	+1.0
138,092	+		Echvi_0138	0.38	+1.2
138,093	-		Echvi_0138	0.38	+0.3
138,093	-		Echvi_0138	0.38	-0.1
138,093	-		Echvi_0138	0.38	-0.9
138,093	-		Echvi_0138	0.38	-0.1
138,093	-		Echvi_0138	0.38	+0.6
138,191	+		Echvi_0138	0.45	-0.9
138,210	-		Echvi_0138	0.47	-1.0
138,221	+		Echvi_0138	0.47	-0.7
138,222	-		Echvi_0138	0.48	+0.5
138,241	+		Echvi_0138	0.49	-2.0
138,241	+		Echvi_0138	0.49	+0.8
138,241	+		Echvi_0138	0.49	+1.5
138,241	+		Echvi_0138	0.49	-0.5
138,242	-		Echvi_0138	0.49	+1.8
138,242	-		Echvi_0138	0.49	-0.0
138,245	+		Echvi_0138	0.49	-0.4
138,252	-		Echvi_0138	0.50	+0.0
138,263	+		Echvi_0138	0.51	-0.6
138,264	-		Echvi_0138	0.51	+0.4
138,273	-		Echvi_0138	0.51	+0.2
138,275	+		Echvi_0138	0.52	-1.0
138,276	-		Echvi_0138	0.52	+1.7
138,276	-		Echvi_0138	0.52	-0.9
138,276	-		Echvi_0138	0.52	+0.9
138,276	-		Echvi_0138	0.52	-0.3
138,288	-		Echvi_0138	0.53	+0.3
138,290	+		Echvi_0138	0.53	+1.4
138,290	+		Echvi_0138	0.53	+1.1
138,291	-		Echvi_0138	0.53	-2.7
138,302	-		Echvi_0138	0.54	+0.4
138,309	+		Echvi_0138	0.54	+0.4
138,309	+		Echvi_0138	0.54	+1.5
138,310	-		Echvi_0138	0.54	+0.3
138,310	-		Echvi_0138	0.54	+0.7
138,320	+		Echvi_0138	0.55	+0.6
138,320	+		Echvi_0138	0.55	+0.8
138,320	+		Echvi_0138	0.55	+0.6
138,321	-		Echvi_0138	0.55	-1.3
138,321	-		Echvi_0138	0.55	+1.0
138,439	+		Echvi_0138	0.64	+0.4
138,440	-		Echvi_0138	0.64	+0.0
138,440	-		Echvi_0138	0.64	+0.4
138,450	+		Echvi_0138	0.65	+1.0
138,488	-		Echvi_0138	0.68	-1.0
138,506	+		Echvi_0138	0.69	+1.6
138,507	-		Echvi_0138	0.69	-0.5
138,508	+		Echvi_0138	0.69	-0.2
138,508	+		Echvi_0138	0.69	-0.5
138,509	-		Echvi_0138	0.69	+0.3
138,509	-		Echvi_0138	0.69	+0.2
138,559	+		Echvi_0138	0.73	-0.5
138,559	+		Echvi_0138	0.73	-0.7
138,584	-		Echvi_0138	0.75	+1.1
138,584	-		Echvi_0138	0.75	-1.1
138,647	-		Echvi_0138	0.80	-0.7
138,667	+		Echvi_0138	0.81	+0.7
138,667	+		Echvi_0138	0.81	+0.9
138,687	-		Echvi_0138	0.83	+1.0
138,688	+		Echvi_0138	0.83	+0.8
138,689	-		Echvi_0138	0.83	-0.4
138,691	+		Echvi_0138	0.83	-1.2
138,691	+		Echvi_0138	0.83	-0.4
138,692	-		Echvi_0138	0.83	-0.2
138,719	+		Echvi_0138	0.85	-0.3
138,719	+		Echvi_0138	0.85	-0.1
138,719	+		Echvi_0138	0.85	-0.1
138,719	+		Echvi_0138	0.85	-0.3
138,720	-		Echvi_0138	0.85	-0.5
138,720	-		Echvi_0138	0.85	+2.7
138,751	+		Echvi_0138	0.88	+0.3
138,759	-		Echvi_0138	0.88	-0.8
138,759	-		Echvi_0138	0.88	+3.6
138,764	-		Echvi_0138	0.89	+0.5
138,772	+		Echvi_0138	0.89	-0.1
138,790	+				+1.0
138,790	+				-0.5
138,791	-				+0.3
138,794	+				+1.3
138,794	+				-1.0
138,794	+				+1.0
138,795	-				-0.4
138,795	-				-0.3
138,795	-				-0.5
138,795	-				-0.6
138,796	+				+2.1
138,796	+				+0.4
138,796	+				-0.0
138,796	+				-2.3
138,797	-				-0.6
138,797	-				+1.5
138,797	-				+0.2
138,797	-				-0.1
138,797	-				-1.0
138,830	+				-1.2
138,831	-				+0.2
138,833	-				+0.4
138,833	-				+2.0
138,951	+				-0.2
138,963	+				+0.7
138,964	-				+0.1
138,966	+				-0.4
138,986	-				-1.0
138,994	-				+1.7
139,009	+				-0.5
139,034	-				+0.1
139,068	+				+0.2
139,095	+				+0.2
139,124	+				+0.5
139,124	+				+0.3
139,133	+				+2.9
139,271	+		Echvi_0139	0.15	-0.2
139,271	+		Echvi_0139	0.15	-0.4
139,288	+		Echvi_0139	0.16	-0.0
139,301	-		Echvi_0139	0.17	+0.9
139,325	-		Echvi_0139	0.19	+1.1
139,325	-		Echvi_0139	0.19	+1.5
139,463	+		Echvi_0139	0.28	-0.2
139,464	-		Echvi_0139	0.28	-0.9
139,484	-		Echvi_0139	0.29	+0.8
139,484	-		Echvi_0139	0.29	-0.0
139,491	+		Echvi_0139	0.30	+2.3
139,499	+		Echvi_0139	0.30	+1.3
139,499	+		Echvi_0139	0.30	-0.2
139,502	+		Echvi_0139	0.31	-0.4
139,516	+		Echvi_0139	0.32	+1.2
139,517	-		Echvi_0139	0.32	-1.2
139,517	-		Echvi_0139	0.32	-0.1
139,519	+		Echvi_0139	0.32	+0.6
139,519	+		Echvi_0139	0.32	+0.9
139,519	+		Echvi_0139	0.32	+0.7
139,520	-		Echvi_0139	0.32	-0.2
139,523	+		Echvi_0139	0.32	-1.2
139,563	+		Echvi_0139	0.35	+1.5
139,564	-		Echvi_0139	0.35	-1.9
139,619	+		Echvi_0139	0.39	+1.6
139,619	+		Echvi_0139	0.39	+1.5
139,619	+		Echvi_0139	0.39	+0.2
139,620	-		Echvi_0139	0.39	-0.8
139,736	+		Echvi_0139	0.47	-1.2
139,736	+		Echvi_0139	0.47	+0.1
139,737	-		Echvi_0139	0.47	+2.0
139,774	-		Echvi_0139	0.49	+0.9
139,774	-		Echvi_0139	0.49	+0.0
139,804	-		Echvi_0139	0.51	-0.3
139,804	-		Echvi_0139	0.51	+1.9
139,805	+		Echvi_0139	0.51	+0.3
139,805	+		Echvi_0139	0.51	+1.8
139,806	-		Echvi_0139	0.51	+0.5
139,806	-		Echvi_0139	0.51	+1.5
139,806	-		Echvi_0139	0.51	+0.2
139,806	-		Echvi_0139	0.51	+0.2
139,807	+		Echvi_0139	0.51	+2.1
139,807	+		Echvi_0139	0.51	-0.6
139,807	+		Echvi_0139	0.51	+1.3
139,808	-		Echvi_0139	0.51	+0.1
139,808	-		Echvi_0139	0.51	+0.5
139,808	-		Echvi_0139	0.51	-0.3
139,808	-		Echvi_0139	0.51	-0.9
139,848	-		Echvi_0139	0.54	+2.0
139,872	-		Echvi_0139	0.56	+0.7
139,902	+		Echvi_0139	0.58	+0.1