Experiment: m.b. Carbenicillin 0.0004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18695 and CA264_18700 are separated by 70 nucleotides CA264_18700 and CA264_18705 are separated by 93 nucleotides CA264_18705 and CA264_18710 are separated by 169 nucleotides CA264_18710 and CA264_18715 overlap by 8 nucleotides
CA264_18695: CA264_18695 - glycogen synthase, at 4,341,194 to 4,342,417
_18695
CA264_18700: CA264_18700 - cytochrome C biogenesis protein, at 4,342,488 to 4,345,085
_18700
CA264_18705: CA264_18705 - cytochrome C biogenesis protein, at 4,345,179 to 4,345,604
_18705
CA264_18710: CA264_18710 - hypothetical protein, at 4,345,774 to 4,346,034
_18710
CA264_18715: CA264_18715 - ABC transporter permease, at 4,346,027 to 4,346,692
_18715
Position (kb)
4342
4343
4344
4345
4346 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4341.566 kb on + strand, within CA264_18695 at 4341.567 kb on - strand, within CA264_18695 at 4341.693 kb on + strand, within CA264_18695 at 4341.698 kb on + strand, within CA264_18695 at 4341.698 kb on + strand, within CA264_18695 at 4341.699 kb on - strand, within CA264_18695 at 4341.810 kb on + strand, within CA264_18695 at 4341.810 kb on + strand, within CA264_18695 at 4341.810 kb on + strand, within CA264_18695 at 4341.811 kb on - strand, within CA264_18695 at 4341.914 kb on + strand, within CA264_18695 at 4341.915 kb on - strand, within CA264_18695 at 4341.915 kb on - strand, within CA264_18695 at 4341.915 kb on - strand, within CA264_18695 at 4341.929 kb on + strand, within CA264_18695 at 4341.973 kb on + strand, within CA264_18695 at 4341.973 kb on + strand, within CA264_18695 at 4341.974 kb on - strand, within CA264_18695 at 4341.978 kb on + strand, within CA264_18695 at 4341.979 kb on - strand, within CA264_18695 at 4341.990 kb on + strand, within CA264_18695 at 4342.046 kb on + strand, within CA264_18695 at 4342.047 kb on - strand, within CA264_18695 at 4342.055 kb on + strand, within CA264_18695 at 4342.085 kb on + strand, within CA264_18695 at 4342.085 kb on + strand, within CA264_18695 at 4342.114 kb on + strand, within CA264_18695 at 4342.360 kb on + strand at 4342.384 kb on + strand at 4345.180 kb on + strand at 4345.615 kb on + strand at 4345.624 kb on + strand at 4345.631 kb on - strand at 4345.631 kb on - strand at 4345.631 kb on - strand at 4345.643 kb on + strand at 4345.749 kb on + strand at 4345.755 kb on + strand at 4345.755 kb on + strand at 4345.757 kb on + strand at 4346.043 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.0004 mg/ml remove 4,341,566 + CA264_18695 0.30 +0.4 4,341,567 - CA264_18695 0.30 +0.2 4,341,693 + CA264_18695 0.41 +0.2 4,341,698 + CA264_18695 0.41 +0.9 4,341,698 + CA264_18695 0.41 +0.8 4,341,699 - CA264_18695 0.41 -1.9 4,341,810 + CA264_18695 0.50 -0.3 4,341,810 + CA264_18695 0.50 -0.1 4,341,810 + CA264_18695 0.50 +0.3 4,341,811 - CA264_18695 0.50 -0.1 4,341,914 + CA264_18695 0.59 +1.3 4,341,915 - CA264_18695 0.59 -0.8 4,341,915 - CA264_18695 0.59 +0.3 4,341,915 - CA264_18695 0.59 +0.7 4,341,929 + CA264_18695 0.60 +1.1 4,341,973 + CA264_18695 0.64 +1.3 4,341,973 + CA264_18695 0.64 +0.7 4,341,974 - CA264_18695 0.64 +0.4 4,341,978 + CA264_18695 0.64 -0.2 4,341,979 - CA264_18695 0.64 +0.3 4,341,990 + CA264_18695 0.65 +0.4 4,342,046 + CA264_18695 0.70 +2.1 4,342,047 - CA264_18695 0.70 -0.1 4,342,055 + CA264_18695 0.70 +1.2 4,342,085 + CA264_18695 0.73 +0.3 4,342,085 + CA264_18695 0.73 +0.3 4,342,114 + CA264_18695 0.75 +0.3 4,342,360 + +1.2 4,342,384 + +0.9 4,345,180 + -0.0 4,345,615 + -0.5 4,345,624 + -0.4 4,345,631 - +0.1 4,345,631 - -0.0 4,345,631 - -0.6 4,345,643 + -0.1 4,345,749 + -1.1 4,345,755 + -2.9 4,345,755 + -2.5 4,345,757 + +0.5 4,346,043 - +0.3
Or see this region's nucleotide sequence