Experiment: m.b. Carbenicillin 0.0004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_15130 and CA264_15135 are separated by 104 nucleotides CA264_15135 and CA264_15140 are separated by 93 nucleotides
CA264_15130: CA264_15130 - ferrochelatase, at 3,548,870 to 3,549,898
_15130
CA264_15135: CA264_15135 - TIGR00730 family Rossman fold protein, at 3,550,003 to 3,550,584
_15135
CA264_15140: CA264_15140 - cysteine desulfurase, at 3,550,678 to 3,551,820
_15140
Position (kb)
3548
3549
3550 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3547.921 kb on + strand at 3548.112 kb on + strand at 3548.112 kb on + strand at 3548.112 kb on + strand at 3548.112 kb on + strand at 3548.112 kb on + strand at 3548.118 kb on + strand at 3548.122 kb on + strand at 3548.122 kb on + strand at 3548.194 kb on + strand at 3548.196 kb on + strand at 3548.196 kb on + strand at 3548.196 kb on + strand at 3548.204 kb on + strand at 3548.214 kb on + strand at 3548.259 kb on + strand at 3548.260 kb on - strand at 3548.292 kb on + strand at 3548.292 kb on + strand at 3548.493 kb on + strand at 3548.518 kb on - strand at 3548.575 kb on + strand at 3548.576 kb on - strand at 3548.591 kb on + strand at 3548.600 kb on + strand at 3548.606 kb on - strand at 3548.616 kb on + strand at 3548.654 kb on + strand at 3548.680 kb on - strand at 3548.698 kb on + strand at 3548.699 kb on - strand at 3548.705 kb on - strand at 3548.705 kb on - strand at 3548.709 kb on + strand at 3548.709 kb on + strand at 3548.710 kb on - strand at 3548.710 kb on - strand at 3548.710 kb on - strand at 3548.716 kb on + strand at 3548.740 kb on - strand at 3548.762 kb on + strand at 3548.762 kb on + strand at 3548.762 kb on + strand at 3548.802 kb on - strand at 3548.802 kb on - strand at 3548.805 kb on + strand at 3548.805 kb on + strand at 3548.805 kb on + strand at 3548.830 kb on + strand at 3548.830 kb on + strand at 3548.831 kb on - strand at 3548.834 kb on + strand at 3548.835 kb on - strand at 3548.837 kb on + strand at 3548.838 kb on - strand at 3548.860 kb on + strand at 3548.861 kb on - strand at 3548.861 kb on - strand at 3548.861 kb on - strand at 3548.864 kb on + strand at 3549.896 kb on + strand at 3549.896 kb on + strand at 3549.897 kb on - strand at 3549.897 kb on - strand at 3549.960 kb on + strand at 3549.961 kb on - strand at 3549.983 kb on + strand at 3550.004 kb on + strand at 3550.005 kb on - strand at 3550.049 kb on + strand at 3550.057 kb on + strand at 3550.095 kb on + strand, within CA264_15135 at 3550.172 kb on + strand, within CA264_15135 at 3550.181 kb on + strand, within CA264_15135 at 3550.181 kb on - strand, within CA264_15135 at 3550.234 kb on - strand, within CA264_15135 at 3550.243 kb on + strand, within CA264_15135 at 3550.244 kb on - strand, within CA264_15135 at 3550.333 kb on + strand, within CA264_15135 at 3550.484 kb on - strand, within CA264_15135 at 3550.532 kb on + strand at 3550.532 kb on + strand at 3550.574 kb on - strand at 3550.576 kb on - strand at 3550.650 kb on + strand at 3550.650 kb on + strand at 3550.659 kb on + strand at 3550.659 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.0004 mg/ml remove 3,547,921 + -0.8 3,548,112 + +0.6 3,548,112 + -0.7 3,548,112 + +0.0 3,548,112 + -0.2 3,548,112 + +0.1 3,548,118 + -0.2 3,548,122 + -0.1 3,548,122 + -1.1 3,548,194 + -0.7 3,548,196 + -1.0 3,548,196 + +0.4 3,548,196 + -0.3 3,548,204 + -2.2 3,548,214 + -0.2 3,548,259 + -0.2 3,548,260 - -0.2 3,548,292 + -0.1 3,548,292 + -0.3 3,548,493 + +1.0 3,548,518 - -0.1 3,548,575 + -0.1 3,548,576 - -0.7 3,548,591 + +0.7 3,548,600 + +0.8 3,548,606 - -0.4 3,548,616 + +0.1 3,548,654 + -1.9 3,548,680 - -0.5 3,548,698 + +1.8 3,548,699 - +1.4 3,548,705 - +0.7 3,548,705 - -0.6 3,548,709 + -0.2 3,548,709 + +0.5 3,548,710 - +0.8 3,548,710 - +0.3 3,548,710 - -0.8 3,548,716 + +0.8 3,548,740 - -0.6 3,548,762 + +0.8 3,548,762 + +1.1 3,548,762 + -1.5 3,548,802 - +0.1 3,548,802 - -0.7 3,548,805 + +0.1 3,548,805 + -0.1 3,548,805 + -0.6 3,548,830 + +0.1 3,548,830 + +0.1 3,548,831 - +0.3 3,548,834 + -0.3 3,548,835 - +0.5 3,548,837 + -0.3 3,548,838 - +2.7 3,548,860 + +0.3 3,548,861 - -0.4 3,548,861 - -1.0 3,548,861 - +0.5 3,548,864 + -0.1 3,549,896 + -0.2 3,549,896 + -0.8 3,549,897 - -0.2 3,549,897 - +0.8 3,549,960 + -0.5 3,549,961 - +1.4 3,549,983 + -0.0 3,550,004 + -0.4 3,550,005 - +0.5 3,550,049 + +0.3 3,550,057 + -1.2 3,550,095 + CA264_15135 0.16 -0.6 3,550,172 + CA264_15135 0.29 -0.4 3,550,181 + CA264_15135 0.31 -0.7 3,550,181 - CA264_15135 0.31 -1.0 3,550,234 - CA264_15135 0.40 +0.4 3,550,243 + CA264_15135 0.41 -0.9 3,550,244 - CA264_15135 0.41 -0.2 3,550,333 + CA264_15135 0.57 -0.1 3,550,484 - CA264_15135 0.83 +0.2 3,550,532 + -1.2 3,550,532 + -0.5 3,550,574 - -0.1 3,550,576 - -0.5 3,550,650 + +0.3 3,550,650 + +0.1 3,550,659 + +0.4 3,550,659 + +0.1
Or see this region's nucleotide sequence