Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_09355
Experiment: m.b. Carbenicillin 0.0004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Carbenicillin 0.0004 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,186,698 | + | -1.8 | |||
2,186,699 | - | -0.5 | |||
2,186,709 | - | -0.9 | |||
2,186,838 | + | +0.1 | |||
2,186,995 | - | -0.3 | |||
2,186,995 | - | -0.2 | |||
2,187,000 | + | +1.3 | |||
2,187,072 | + | -0.2 | |||
2,187,074 | + | -0.6 | |||
2,187,086 | + | -0.7 | |||
2,187,086 | + | -0.3 | |||
2,187,213 | + | CA264_09355 | 0.27 | -1.4 | |
2,187,218 | + | CA264_09355 | 0.28 | -0.6 | |
2,187,221 | - | CA264_09355 | 0.29 | -0.5 | |
2,187,266 | + | CA264_09355 | 0.36 | +0.6 | |
2,187,291 | + | CA264_09355 | 0.41 | -0.3 | |
2,187,472 | + | CA264_09355 | 0.71 | -1.6 | |
2,187,473 | - | CA264_09355 | 0.72 | +0.6 | |
2,187,528 | - | CA264_09355 | 0.81 | -0.6 | |
2,187,604 | - | -0.3 | |||
2,187,657 | + | -0.3 | |||
2,187,658 | - | -0.5 | |||
2,187,658 | - | -0.5 | |||
2,187,658 | - | +0.6 | |||
2,187,658 | - | -0.2 | |||
2,187,660 | + | -0.4 | |||
2,187,663 | - | +0.4 | |||
2,187,677 | - | +0.3 | |||
2,187,957 | - | CA264_09360 | 0.17 | -1.6 | |
2,188,418 | + | CA264_09360 | 0.56 | -2.5 | |
2,188,584 | + | CA264_09360 | 0.70 | -0.2 |
Or see this region's nucleotide sequence