Experiment: m.b. Carbenicillin 0.0004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09300 and CA264_09305 are separated by 303 nucleotides CA264_09305 and CA264_09310 are separated by 89 nucleotides
CA264_09300: CA264_09300 - EamA family transporter, at 2,175,345 to 2,176,259
_09300
CA264_09305: CA264_09305 - copper homeostasis protein, at 2,176,563 to 2,177,108
_09305
CA264_09310: CA264_09310 - tryptophan--tRNA ligase, at 2,177,198 to 2,178,172
_09310
Position (kb)
2176
2177
2178 Strain fitness (log2 ratio)
-1
0
1 at 2175.578 kb on + strand, within CA264_09300 at 2175.838 kb on - strand, within CA264_09300 at 2175.940 kb on + strand, within CA264_09300 at 2176.118 kb on + strand, within CA264_09300 at 2176.178 kb on + strand at 2176.202 kb on + strand at 2176.257 kb on + strand at 2176.264 kb on + strand at 2176.286 kb on - strand at 2176.332 kb on + strand at 2176.345 kb on - strand at 2176.345 kb on - strand at 2176.441 kb on + strand at 2176.442 kb on - strand at 2176.442 kb on - strand at 2176.461 kb on - strand at 2176.482 kb on + strand at 2176.483 kb on - strand at 2176.485 kb on + strand at 2176.486 kb on - strand at 2176.487 kb on + strand at 2176.583 kb on + strand at 2176.586 kb on - strand at 2176.591 kb on + strand at 2176.813 kb on + strand, within CA264_09305 at 2176.814 kb on - strand, within CA264_09305 at 2176.865 kb on + strand, within CA264_09305 at 2176.866 kb on - strand, within CA264_09305 at 2176.881 kb on + strand, within CA264_09305 at 2176.881 kb on + strand, within CA264_09305 at 2176.882 kb on - strand, within CA264_09305 at 2176.882 kb on - strand, within CA264_09305 at 2176.882 kb on - strand, within CA264_09305 at 2176.882 kb on - strand, within CA264_09305 at 2176.951 kb on + strand, within CA264_09305 at 2176.952 kb on - strand, within CA264_09305 at 2177.002 kb on + strand, within CA264_09305 at 2177.026 kb on + strand, within CA264_09305 at 2177.048 kb on - strand, within CA264_09305 at 2177.072 kb on + strand at 2177.089 kb on - strand at 2177.104 kb on + strand at 2177.105 kb on - strand at 2177.105 kb on - strand at 2177.105 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.0004 mg/ml remove 2,175,578 + CA264_09300 0.25 -1.1 2,175,838 - CA264_09300 0.54 -0.9 2,175,940 + CA264_09300 0.65 -0.9 2,176,118 + CA264_09300 0.84 -1.2 2,176,178 + -0.7 2,176,202 + +0.7 2,176,257 + +0.2 2,176,264 + -0.5 2,176,286 - -0.1 2,176,332 + -0.7 2,176,345 - +0.5 2,176,345 - -1.3 2,176,441 + +0.5 2,176,442 - -0.6 2,176,442 - -0.3 2,176,461 - +0.0 2,176,482 + -0.0 2,176,483 - -0.3 2,176,485 + -0.7 2,176,486 - +0.6 2,176,487 + -0.2 2,176,583 + -0.3 2,176,586 - +0.7 2,176,591 + -0.2 2,176,813 + CA264_09305 0.46 -0.4 2,176,814 - CA264_09305 0.46 -0.2 2,176,865 + CA264_09305 0.55 +0.0 2,176,866 - CA264_09305 0.55 -0.6 2,176,881 + CA264_09305 0.58 +1.5 2,176,881 + CA264_09305 0.58 -0.6 2,176,882 - CA264_09305 0.58 -1.1 2,176,882 - CA264_09305 0.58 -0.3 2,176,882 - CA264_09305 0.58 -1.1 2,176,882 - CA264_09305 0.58 -1.1 2,176,951 + CA264_09305 0.71 +0.9 2,176,952 - CA264_09305 0.71 -0.3 2,177,002 + CA264_09305 0.80 +0.2 2,177,026 + CA264_09305 0.85 +0.1 2,177,048 - CA264_09305 0.89 +0.1 2,177,072 + +0.4 2,177,089 - +1.0 2,177,104 + -0.6 2,177,105 - +0.1 2,177,105 - +0.6 2,177,105 - -0.4
Or see this region's nucleotide sequence