Experiment: m.b. Carbenicillin 0.0004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_08775 and CA264_08780 are separated by 70 nucleotides CA264_08780 and CA264_08785 are separated by 113 nucleotides
CA264_08775: CA264_08775 - ZIP family metal transporter, at 2,049,662 to 2,050,486
_08775
CA264_08780: CA264_08780 - hypothetical protein, at 2,050,557 to 2,051,318
_08780
CA264_08785: CA264_08785 - hypothetical protein, at 2,051,432 to 2,052,622
_08785
Position (kb)
2050
2051
2052 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2049.589 kb on - strand at 2049.613 kb on + strand at 2049.736 kb on - strand at 2049.761 kb on + strand, within CA264_08775 at 2049.761 kb on + strand, within CA264_08775 at 2049.776 kb on + strand, within CA264_08775 at 2049.776 kb on + strand, within CA264_08775 at 2049.776 kb on + strand, within CA264_08775 at 2049.780 kb on + strand, within CA264_08775 at 2049.834 kb on + strand, within CA264_08775 at 2049.834 kb on + strand, within CA264_08775 at 2049.835 kb on - strand, within CA264_08775 at 2049.835 kb on - strand, within CA264_08775 at 2050.012 kb on + strand, within CA264_08775 at 2050.012 kb on + strand, within CA264_08775 at 2050.064 kb on + strand, within CA264_08775 at 2050.064 kb on + strand, within CA264_08775 at 2050.076 kb on + strand, within CA264_08775 at 2050.077 kb on - strand, within CA264_08775 at 2050.157 kb on - strand, within CA264_08775 at 2050.342 kb on + strand, within CA264_08775 at 2050.342 kb on + strand, within CA264_08775 at 2050.343 kb on - strand, within CA264_08775 at 2050.343 kb on - strand, within CA264_08775 at 2050.343 kb on - strand, within CA264_08775 at 2050.343 kb on - strand, within CA264_08775 at 2050.343 kb on - strand, within CA264_08775 at 2050.343 kb on - strand, within CA264_08775 at 2050.364 kb on - strand, within CA264_08775 at 2050.407 kb on - strand at 2050.443 kb on + strand at 2050.486 kb on + strand at 2050.486 kb on + strand at 2050.487 kb on - strand at 2050.487 kb on - strand at 2050.588 kb on + strand at 2050.588 kb on + strand at 2050.661 kb on + strand, within CA264_08780 at 2050.666 kb on + strand, within CA264_08780 at 2050.709 kb on + strand, within CA264_08780 at 2050.709 kb on + strand, within CA264_08780 at 2050.709 kb on + strand, within CA264_08780 at 2050.709 kb on + strand, within CA264_08780 at 2050.710 kb on - strand, within CA264_08780 at 2050.710 kb on - strand, within CA264_08780 at 2050.710 kb on - strand, within CA264_08780 at 2050.710 kb on - strand, within CA264_08780 at 2050.713 kb on + strand, within CA264_08780 at 2050.779 kb on - strand, within CA264_08780 at 2050.844 kb on + strand, within CA264_08780 at 2050.887 kb on + strand, within CA264_08780 at 2050.932 kb on + strand, within CA264_08780 at 2050.945 kb on + strand, within CA264_08780 at 2051.072 kb on + strand, within CA264_08780 at 2051.073 kb on - strand, within CA264_08780 at 2051.083 kb on + strand, within CA264_08780 at 2051.178 kb on + strand, within CA264_08780 at 2051.178 kb on + strand, within CA264_08780 at 2051.187 kb on + strand, within CA264_08780 at 2051.187 kb on + strand, within CA264_08780 at 2051.187 kb on + strand, within CA264_08780 at 2051.187 kb on + strand, within CA264_08780 at 2051.188 kb on - strand, within CA264_08780 at 2051.188 kb on - strand, within CA264_08780 at 2051.188 kb on - strand, within CA264_08780 at 2051.190 kb on - strand, within CA264_08780 at 2051.228 kb on + strand, within CA264_08780 at 2051.229 kb on - strand, within CA264_08780 at 2051.229 kb on - strand, within CA264_08780 at 2051.313 kb on + strand at 2051.314 kb on - strand at 2051.318 kb on + strand at 2051.318 kb on + strand at 2051.425 kb on + strand at 2051.484 kb on + strand at 2051.484 kb on + strand at 2051.485 kb on - strand at 2051.542 kb on - strand at 2051.566 kb on - strand, within CA264_08785 at 2051.574 kb on + strand, within CA264_08785 at 2051.631 kb on - strand, within CA264_08785 at 2051.631 kb on - strand, within CA264_08785 at 2051.631 kb on - strand, within CA264_08785 at 2051.632 kb on + strand, within CA264_08785 at 2051.633 kb on - strand, within CA264_08785 at 2051.633 kb on - strand, within CA264_08785 at 2051.669 kb on - strand, within CA264_08785 at 2051.687 kb on - strand, within CA264_08785 at 2051.699 kb on - strand, within CA264_08785 at 2051.821 kb on - strand, within CA264_08785 at 2051.933 kb on - strand, within CA264_08785 at 2052.129 kb on - strand, within CA264_08785 at 2052.146 kb on - strand, within CA264_08785 at 2052.273 kb on - strand, within CA264_08785 at 2052.301 kb on + strand, within CA264_08785
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.0004 mg/ml remove 2,049,589 - -0.3 2,049,613 + +0.3 2,049,736 - -0.2 2,049,761 + CA264_08775 0.12 -1.1 2,049,761 + CA264_08775 0.12 +0.3 2,049,776 + CA264_08775 0.14 +0.1 2,049,776 + CA264_08775 0.14 -0.5 2,049,776 + CA264_08775 0.14 +0.2 2,049,780 + CA264_08775 0.14 +0.0 2,049,834 + CA264_08775 0.21 -0.8 2,049,834 + CA264_08775 0.21 -0.1 2,049,835 - CA264_08775 0.21 -0.1 2,049,835 - CA264_08775 0.21 -0.8 2,050,012 + CA264_08775 0.42 -0.1 2,050,012 + CA264_08775 0.42 +0.8 2,050,064 + CA264_08775 0.49 -1.0 2,050,064 + CA264_08775 0.49 +0.5 2,050,076 + CA264_08775 0.50 -0.1 2,050,077 - CA264_08775 0.50 +0.1 2,050,157 - CA264_08775 0.60 -0.3 2,050,342 + CA264_08775 0.82 +0.2 2,050,342 + CA264_08775 0.82 +1.8 2,050,343 - CA264_08775 0.83 -0.4 2,050,343 - CA264_08775 0.83 -0.4 2,050,343 - CA264_08775 0.83 -0.1 2,050,343 - CA264_08775 0.83 +0.4 2,050,343 - CA264_08775 0.83 +0.1 2,050,343 - CA264_08775 0.83 +0.8 2,050,364 - CA264_08775 0.85 -0.0 2,050,407 - -1.1 2,050,443 + -0.1 2,050,486 + -0.3 2,050,486 + +0.9 2,050,487 - -0.3 2,050,487 - -2.3 2,050,588 + -0.2 2,050,588 + +1.1 2,050,661 + CA264_08780 0.14 +0.3 2,050,666 + CA264_08780 0.14 -0.3 2,050,709 + CA264_08780 0.20 +1.5 2,050,709 + CA264_08780 0.20 +1.5 2,050,709 + CA264_08780 0.20 +0.8 2,050,709 + CA264_08780 0.20 +0.8 2,050,710 - CA264_08780 0.20 +0.9 2,050,710 - CA264_08780 0.20 +1.2 2,050,710 - CA264_08780 0.20 +0.8 2,050,710 - CA264_08780 0.20 +1.0 2,050,713 + CA264_08780 0.20 -0.3 2,050,779 - CA264_08780 0.29 +0.7 2,050,844 + CA264_08780 0.38 +1.1 2,050,887 + CA264_08780 0.43 -0.3 2,050,932 + CA264_08780 0.49 +0.1 2,050,945 + CA264_08780 0.51 -0.1 2,051,072 + CA264_08780 0.68 +0.1 2,051,073 - CA264_08780 0.68 +0.6 2,051,083 + CA264_08780 0.69 +1.7 2,051,178 + CA264_08780 0.81 -0.6 2,051,178 + CA264_08780 0.81 +1.2 2,051,187 + CA264_08780 0.83 +0.4 2,051,187 + CA264_08780 0.83 +1.4 2,051,187 + CA264_08780 0.83 +0.5 2,051,187 + CA264_08780 0.83 -0.0 2,051,188 - CA264_08780 0.83 +0.1 2,051,188 - CA264_08780 0.83 +0.3 2,051,188 - CA264_08780 0.83 +0.8 2,051,190 - CA264_08780 0.83 +1.8 2,051,228 + CA264_08780 0.88 +1.3 2,051,229 - CA264_08780 0.88 +1.9 2,051,229 - CA264_08780 0.88 +0.8 2,051,313 + +0.3 2,051,314 - +0.1 2,051,318 + +0.1 2,051,318 + +1.2 2,051,425 + -1.8 2,051,484 + +0.2 2,051,484 + -0.4 2,051,485 - +0.6 2,051,542 - +0.5 2,051,566 - CA264_08785 0.11 +0.6 2,051,574 + CA264_08785 0.12 +0.1 2,051,631 - CA264_08785 0.17 +0.0 2,051,631 - CA264_08785 0.17 +0.0 2,051,631 - CA264_08785 0.17 -0.1 2,051,632 + CA264_08785 0.17 -0.1 2,051,633 - CA264_08785 0.17 -0.0 2,051,633 - CA264_08785 0.17 +0.4 2,051,669 - CA264_08785 0.20 +1.9 2,051,687 - CA264_08785 0.21 -0.0 2,051,699 - CA264_08785 0.22 -0.9 2,051,821 - CA264_08785 0.33 +0.3 2,051,933 - CA264_08785 0.42 -0.3 2,052,129 - CA264_08785 0.59 -0.0 2,052,146 - CA264_08785 0.60 -0.2 2,052,273 - CA264_08785 0.71 -0.4 2,052,301 + CA264_08785 0.73 -0.3
Or see this region's nucleotide sequence