Experiment: m.b. Carbenicillin 0.0004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07170 and CA264_07175 are separated by 4 nucleotides CA264_07175 and CA264_07180 are separated by 14 nucleotides
CA264_07170: CA264_07170 - MFS transporter, at 1,656,855 to 1,658,402
_07170
CA264_07175: CA264_07175 - secretion protein HlyD, at 1,658,407 to 1,659,453
_07175
CA264_07180: CA264_07180 - transporter, at 1,659,468 to 1,660,811
_07180
Position (kb)
1658
1659
1660 Strain fitness (log2 ratio)
-1
0
1
2 at 1657.460 kb on + strand, within CA264_07170 at 1657.466 kb on + strand, within CA264_07170 at 1657.466 kb on + strand, within CA264_07170 at 1657.561 kb on + strand, within CA264_07170 at 1657.595 kb on + strand, within CA264_07170 at 1657.596 kb on - strand, within CA264_07170 at 1657.635 kb on + strand, within CA264_07170 at 1657.670 kb on + strand, within CA264_07170 at 1657.699 kb on - strand at 1657.718 kb on - strand, within CA264_07170 at 1657.858 kb on + strand, within CA264_07170 at 1657.921 kb on + strand, within CA264_07170 at 1657.921 kb on + strand, within CA264_07170 at 1657.922 kb on - strand, within CA264_07170 at 1657.922 kb on - strand, within CA264_07170 at 1657.925 kb on + strand, within CA264_07170 at 1657.932 kb on - strand, within CA264_07170 at 1657.936 kb on + strand, within CA264_07170 at 1657.937 kb on - strand, within CA264_07170 at 1657.937 kb on - strand, within CA264_07170 at 1658.007 kb on + strand, within CA264_07170 at 1658.007 kb on + strand, within CA264_07170 at 1658.007 kb on + strand, within CA264_07170 at 1658.007 kb on + strand, within CA264_07170 at 1658.008 kb on - strand, within CA264_07170 at 1658.008 kb on - strand, within CA264_07170 at 1658.082 kb on + strand, within CA264_07170 at 1658.085 kb on - strand, within CA264_07170 at 1658.085 kb on - strand, within CA264_07170 at 1658.096 kb on + strand, within CA264_07170 at 1658.148 kb on - strand, within CA264_07170 at 1658.160 kb on - strand, within CA264_07170 at 1658.174 kb on - strand, within CA264_07170 at 1658.265 kb on - strand at 1658.288 kb on + strand at 1658.289 kb on - strand at 1658.295 kb on + strand at 1658.295 kb on + strand at 1658.296 kb on - strand at 1658.321 kb on + strand at 1658.322 kb on - strand at 1658.404 kb on + strand at 1658.405 kb on - strand at 1658.408 kb on + strand at 1658.409 kb on - strand at 1658.435 kb on + strand at 1658.436 kb on - strand at 1658.437 kb on + strand at 1658.437 kb on + strand at 1658.437 kb on + strand at 1658.437 kb on + strand at 1658.437 kb on + strand at 1658.438 kb on - strand at 1658.438 kb on - strand at 1658.513 kb on - strand, within CA264_07175 at 1658.513 kb on - strand, within CA264_07175 at 1658.591 kb on + strand, within CA264_07175 at 1658.605 kb on + strand, within CA264_07175 at 1658.605 kb on + strand, within CA264_07175 at 1658.695 kb on + strand, within CA264_07175 at 1658.696 kb on - strand, within CA264_07175 at 1658.699 kb on + strand, within CA264_07175 at 1658.813 kb on + strand, within CA264_07175 at 1658.874 kb on + strand, within CA264_07175 at 1658.946 kb on - strand, within CA264_07175 at 1659.000 kb on + strand, within CA264_07175 at 1659.000 kb on + strand, within CA264_07175 at 1659.003 kb on + strand, within CA264_07175 at 1659.004 kb on - strand, within CA264_07175 at 1659.036 kb on + strand, within CA264_07175 at 1659.065 kb on - strand, within CA264_07175 at 1659.065 kb on - strand, within CA264_07175 at 1659.136 kb on + strand, within CA264_07175 at 1659.190 kb on + strand, within CA264_07175 at 1659.268 kb on - strand, within CA264_07175 at 1659.268 kb on - strand, within CA264_07175 at 1659.268 kb on - strand, within CA264_07175 at 1659.354 kb on - strand at 1659.359 kb on + strand at 1659.359 kb on + strand at 1659.391 kb on + strand at 1659.394 kb on - strand at 1659.439 kb on - strand at 1659.469 kb on + strand at 1659.473 kb on + strand at 1659.474 kb on - strand at 1659.477 kb on + strand at 1659.503 kb on + strand at 1659.503 kb on + strand at 1659.505 kb on + strand at 1659.508 kb on + strand at 1659.509 kb on - strand at 1659.707 kb on - strand, within CA264_07180 at 1659.756 kb on - strand, within CA264_07180 at 1659.865 kb on + strand, within CA264_07180 at 1659.866 kb on - strand, within CA264_07180 at 1659.903 kb on + strand, within CA264_07180 at 1659.908 kb on - strand, within CA264_07180 at 1659.963 kb on + strand, within CA264_07180 at 1660.005 kb on + strand, within CA264_07180 at 1660.020 kb on + strand, within CA264_07180 at 1660.021 kb on - strand, within CA264_07180 at 1660.039 kb on + strand, within CA264_07180 at 1660.228 kb on - strand, within CA264_07180 at 1660.228 kb on - strand, within CA264_07180 at 1660.324 kb on + strand, within CA264_07180 at 1660.352 kb on + strand, within CA264_07180 at 1660.382 kb on + strand, within CA264_07180
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.0004 mg/ml remove 1,657,460 + CA264_07170 0.39 -1.0 1,657,466 + CA264_07170 0.39 -0.1 1,657,466 + CA264_07170 0.39 -0.2 1,657,561 + CA264_07170 0.46 -1.0 1,657,595 + CA264_07170 0.48 -0.1 1,657,596 - CA264_07170 0.48 -1.0 1,657,635 + CA264_07170 0.50 +0.1 1,657,670 + CA264_07170 0.53 +0.1 1,657,699 - +1.9 1,657,718 - CA264_07170 0.56 -0.4 1,657,858 + CA264_07170 0.65 +0.1 1,657,921 + CA264_07170 0.69 -1.1 1,657,921 + CA264_07170 0.69 -0.7 1,657,922 - CA264_07170 0.69 -0.7 1,657,922 - CA264_07170 0.69 +1.2 1,657,925 + CA264_07170 0.69 -0.6 1,657,932 - CA264_07170 0.70 +0.8 1,657,936 + CA264_07170 0.70 -0.9 1,657,937 - CA264_07170 0.70 -0.5 1,657,937 - CA264_07170 0.70 -0.1 1,658,007 + CA264_07170 0.74 +0.6 1,658,007 + CA264_07170 0.74 -0.8 1,658,007 + CA264_07170 0.74 -0.7 1,658,007 + CA264_07170 0.74 +0.5 1,658,008 - CA264_07170 0.74 -0.8 1,658,008 - CA264_07170 0.74 -0.8 1,658,082 + CA264_07170 0.79 +0.0 1,658,085 - CA264_07170 0.79 +0.8 1,658,085 - CA264_07170 0.79 -0.5 1,658,096 + CA264_07170 0.80 +0.4 1,658,148 - CA264_07170 0.84 +0.5 1,658,160 - CA264_07170 0.84 -1.1 1,658,174 - CA264_07170 0.85 +0.1 1,658,265 - +0.0 1,658,288 + +0.5 1,658,289 - +1.9 1,658,295 + -1.0 1,658,295 + +0.7 1,658,296 - -0.3 1,658,321 + -1.1 1,658,322 - +0.2 1,658,404 + -0.2 1,658,405 - -0.8 1,658,408 + -0.7 1,658,409 - +0.3 1,658,435 + -0.0 1,658,436 - +0.4 1,658,437 + -1.3 1,658,437 + -1.1 1,658,437 + +0.6 1,658,437 + +0.1 1,658,437 + +0.3 1,658,438 - -0.9 1,658,438 - +0.6 1,658,513 - CA264_07175 0.10 -1.0 1,658,513 - CA264_07175 0.10 -0.9 1,658,591 + CA264_07175 0.18 -0.5 1,658,605 + CA264_07175 0.19 -0.3 1,658,605 + CA264_07175 0.19 +1.3 1,658,695 + CA264_07175 0.28 +0.7 1,658,696 - CA264_07175 0.28 -0.7 1,658,699 + CA264_07175 0.28 -0.4 1,658,813 + CA264_07175 0.39 -0.1 1,658,874 + CA264_07175 0.45 -0.3 1,658,946 - CA264_07175 0.51 -0.3 1,659,000 + CA264_07175 0.57 -0.3 1,659,000 + CA264_07175 0.57 -0.2 1,659,003 + CA264_07175 0.57 -0.4 1,659,004 - CA264_07175 0.57 +1.0 1,659,036 + CA264_07175 0.60 -1.0 1,659,065 - CA264_07175 0.63 -0.9 1,659,065 - CA264_07175 0.63 +1.5 1,659,136 + CA264_07175 0.70 -1.1 1,659,190 + CA264_07175 0.75 -0.7 1,659,268 - CA264_07175 0.82 -0.2 1,659,268 - CA264_07175 0.82 -1.3 1,659,268 - CA264_07175 0.82 +0.5 1,659,354 - -0.8 1,659,359 + -0.2 1,659,359 + +1.0 1,659,391 + +0.3 1,659,394 - +0.4 1,659,439 - +0.2 1,659,469 + +0.8 1,659,473 + +0.4 1,659,474 - -0.6 1,659,477 + -0.2 1,659,503 + -0.3 1,659,503 + -0.1 1,659,505 + -0.6 1,659,508 + +0.6 1,659,509 - -0.3 1,659,707 - CA264_07180 0.18 -1.5 1,659,756 - CA264_07180 0.21 +0.3 1,659,865 + CA264_07180 0.30 -0.1 1,659,866 - CA264_07180 0.30 -0.2 1,659,903 + CA264_07180 0.32 +0.6 1,659,908 - CA264_07180 0.33 +0.2 1,659,963 + CA264_07180 0.37 -0.1 1,660,005 + CA264_07180 0.40 +0.6 1,660,020 + CA264_07180 0.41 -0.4 1,660,021 - CA264_07180 0.41 -1.6 1,660,039 + CA264_07180 0.42 +0.6 1,660,228 - CA264_07180 0.57 -0.2 1,660,228 - CA264_07180 0.57 +0.0 1,660,324 + CA264_07180 0.64 -0.5 1,660,352 + CA264_07180 0.66 -0.4 1,660,382 + CA264_07180 0.68 +0.4
Or see this region's nucleotide sequence