Experiment: KB with Mitomycin C 0.05 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4699 and Psyr_4700 are separated by 322 nucleotides Psyr_4700 and Psyr_4701 are separated by 66 nucleotides Psyr_4701 and Psyr_4702 are separated by 231 nucleotides
Psyr_4699: Psyr_4699 - Amino acid-binding ACT, at 5,568,229 to 5,568,771
_4699
Psyr_4700: Psyr_4700 - malate synthase, at 5,569,094 to 5,571,271
_4700
Psyr_4701: Psyr_4701 - Response regulator receiver, at 5,571,338 to 5,571,784
_4701
Psyr_4702: Psyr_4702 - Cyclic nucleotide-binding:CBS:Putative nucleotidyltransferase DUF294, at 5,572,016 to 5,573,950
_4702
Position (kb) 5569
5570
5571
5572 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 5568.117 kb on + strand at 5568.196 kb on - strand at 5568.376 kb on + strand, within Psyr_4699 at 5568.376 kb on + strand, within Psyr_4699 at 5568.376 kb on + strand, within Psyr_4699 at 5568.376 kb on + strand, within Psyr_4699 at 5568.376 kb on + strand, within Psyr_4699 at 5568.376 kb on + strand, within Psyr_4699 at 5568.377 kb on - strand, within Psyr_4699 at 5568.377 kb on - strand, within Psyr_4699 at 5568.377 kb on - strand, within Psyr_4699 at 5568.819 kb on + strand at 5568.820 kb on - strand at 5568.820 kb on - strand at 5568.820 kb on - strand at 5568.820 kb on - strand at 5568.825 kb on + strand at 5568.826 kb on - strand at 5568.826 kb on - strand at 5568.827 kb on + strand at 5568.827 kb on + strand at 5568.827 kb on + strand at 5568.827 kb on + strand at 5568.827 kb on + strand at 5568.827 kb on + strand at 5568.827 kb on + strand at 5568.827 kb on + strand at 5568.827 kb on + strand at 5568.828 kb on - strand at 5568.828 kb on - strand at 5568.828 kb on - strand at 5568.828 kb on - strand at 5568.868 kb on - strand at 5568.922 kb on + strand at 5568.939 kb on - strand at 5568.944 kb on + strand at 5568.957 kb on - strand at 5568.964 kb on + strand at 5568.964 kb on + strand at 5568.965 kb on - strand at 5568.999 kb on + strand at 5568.999 kb on + strand at 5568.999 kb on + strand at 5568.999 kb on + strand at 5568.999 kb on + strand at 5568.999 kb on + strand at 5568.999 kb on + strand at 5568.999 kb on + strand at 5568.999 kb on + strand at 5568.999 kb on + strand at 5568.999 kb on + strand at 5568.999 kb on + strand at 5568.999 kb on + strand at 5569.000 kb on - strand at 5569.000 kb on - strand at 5569.000 kb on - strand at 5569.000 kb on - strand at 5569.000 kb on - strand at 5569.000 kb on - strand at 5569.000 kb on - strand at 5569.000 kb on - strand at 5569.019 kb on + strand at 5569.019 kb on + strand at 5569.019 kb on + strand at 5569.019 kb on + strand at 5569.020 kb on - strand at 5569.020 kb on - strand at 5569.020 kb on - strand at 5569.103 kb on + strand at 5569.272 kb on + strand at 5569.272 kb on + strand at 5569.272 kb on + strand at 5569.334 kb on + strand, within Psyr_4700 at 5569.335 kb on - strand, within Psyr_4700 at 5569.508 kb on + strand, within Psyr_4700 at 5569.509 kb on - strand, within Psyr_4700 at 5569.509 kb on - strand, within Psyr_4700 at 5569.571 kb on + strand, within Psyr_4700 at 5569.571 kb on + strand, within Psyr_4700 at 5569.571 kb on + strand, within Psyr_4700 at 5569.571 kb on + strand, within Psyr_4700 at 5569.572 kb on - strand, within Psyr_4700 at 5569.572 kb on - strand, within Psyr_4700 at 5569.572 kb on - strand, within Psyr_4700 at 5569.573 kb on + strand, within Psyr_4700 at 5569.573 kb on + strand, within Psyr_4700 at 5569.573 kb on + strand, within Psyr_4700 at 5569.574 kb on - strand, within Psyr_4700 at 5569.670 kb on + strand, within Psyr_4700 at 5569.670 kb on + strand, within Psyr_4700 at 5569.670 kb on + strand, within Psyr_4700 at 5569.670 kb on + strand, within Psyr_4700 at 5569.670 kb on + strand, within Psyr_4700 at 5569.670 kb on + strand, within Psyr_4700 at 5569.670 kb on + strand, within Psyr_4700 at 5569.671 kb on - strand, within Psyr_4700 at 5569.671 kb on - strand, within Psyr_4700 at 5569.671 kb on - strand, within Psyr_4700 at 5569.671 kb on - strand, within Psyr_4700 at 5569.671 kb on - strand, within Psyr_4700 at 5569.671 kb on - strand, within Psyr_4700 at 5569.671 kb on - strand, within Psyr_4700 at 5569.671 kb on - strand, within Psyr_4700 at 5569.671 kb on - strand, within Psyr_4700 at 5569.671 kb on - strand, within Psyr_4700 at 5569.671 kb on - strand, within Psyr_4700 at 5569.671 kb on - strand, within Psyr_4700 at 5569.672 kb on + strand, within Psyr_4700 at 5569.672 kb on + strand, within Psyr_4700 at 5569.672 kb on + strand, within Psyr_4700 at 5569.672 kb on + strand, within Psyr_4700 at 5569.673 kb on - strand, within Psyr_4700 at 5569.673 kb on - strand, within Psyr_4700 at 5569.673 kb on - strand, within Psyr_4700 at 5569.673 kb on - strand, within Psyr_4700 at 5570.054 kb on + strand, within Psyr_4700 at 5570.055 kb on - strand, within Psyr_4700 at 5570.267 kb on + strand, within Psyr_4700 at 5570.267 kb on + strand, within Psyr_4700 at 5570.267 kb on + strand, within Psyr_4700 at 5570.267 kb on + strand, within Psyr_4700 at 5570.267 kb on + strand, within Psyr_4700 at 5570.267 kb on + strand, within Psyr_4700 at 5570.267 kb on + strand, within Psyr_4700 at 5570.267 kb on + strand, within Psyr_4700 at 5570.267 kb on + strand, within Psyr_4700 at 5570.267 kb on + strand, within Psyr_4700 at 5570.268 kb on - strand, within Psyr_4700 at 5570.268 kb on - strand, within Psyr_4700 at 5570.268 kb on - strand, within Psyr_4700 at 5570.268 kb on - strand, within Psyr_4700 at 5570.268 kb on - strand, within Psyr_4700 at 5570.268 kb on - strand, within Psyr_4700 at 5570.344 kb on - strand, within Psyr_4700 at 5570.344 kb on - strand, within Psyr_4700 at 5570.909 kb on + strand, within Psyr_4700 at 5570.909 kb on + strand, within Psyr_4700 at 5570.913 kb on + strand, within Psyr_4700 at 5570.913 kb on + strand, within Psyr_4700 at 5570.913 kb on + strand, within Psyr_4700 at 5570.913 kb on + strand, within Psyr_4700 at 5570.913 kb on + strand, within Psyr_4700 at 5570.914 kb on - strand, within Psyr_4700 at 5570.914 kb on - strand, within Psyr_4700 at 5570.914 kb on - strand, within Psyr_4700 at 5570.914 kb on - strand, within Psyr_4700 at 5570.914 kb on - strand, within Psyr_4700 at 5571.122 kb on + strand at 5571.269 kb on + strand at 5571.270 kb on - strand at 5571.270 kb on - strand at 5571.344 kb on + strand at 5571.344 kb on + strand at 5571.386 kb on - strand, within Psyr_4701 at 5571.769 kb on + strand at 5571.770 kb on - strand at 5571.770 kb on - strand at 5571.824 kb on - strand at 5571.947 kb on + strand at 5571.947 kb on + strand at 5571.947 kb on + strand at 5571.947 kb on + strand at 5571.948 kb on - strand at 5571.948 kb on - strand at 5571.948 kb on - strand at 5571.948 kb on - strand at 5571.995 kb on - strand at 5572.071 kb on + strand at 5572.071 kb on + strand at 5572.071 kb on + strand at 5572.071 kb on + strand at 5572.071 kb on + strand at 5572.071 kb on + strand at 5572.071 kb on + strand at 5572.071 kb on + strand at 5572.071 kb on + strand at 5572.071 kb on + strand at 5572.072 kb on - strand at 5572.072 kb on - strand at 5572.140 kb on - strand at 5572.223 kb on + strand, within Psyr_4702 at 5572.223 kb on + strand, within Psyr_4702 at 5572.223 kb on + strand, within Psyr_4702 at 5572.224 kb on - strand, within Psyr_4702 at 5572.224 kb on - strand, within Psyr_4702 at 5572.224 kb on - strand, within Psyr_4702 at 5572.224 kb on - strand, within Psyr_4702
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Mitomycin C 0.05 ug/ml remove 5,568,117 + -1.8 5,568,196 - -1.1 5,568,376 + Psyr_4699 0.27 +0.5 5,568,376 + Psyr_4699 0.27 -0.8 5,568,376 + Psyr_4699 0.27 +0.7 5,568,376 + Psyr_4699 0.27 +2.7 5,568,376 + Psyr_4699 0.27 +0.2 5,568,376 + Psyr_4699 0.27 -0.9 5,568,377 - Psyr_4699 0.27 -1.8 5,568,377 - Psyr_4699 0.27 +4.2 5,568,377 - Psyr_4699 0.27 -1.5 5,568,819 + +4.2 5,568,820 - +1.9 5,568,820 - -2.2 5,568,820 - -0.5 5,568,820 - -1.8 5,568,825 + -0.5 5,568,826 - -1.4 5,568,826 - +0.4 5,568,827 + -2.8 5,568,827 + +0.8 5,568,827 + +1.8 5,568,827 + -2.0 5,568,827 + +2.6 5,568,827 + -0.2 5,568,827 + +1.1 5,568,827 + -0.8 5,568,827 + -2.3 5,568,828 - +0.8 5,568,828 - +3.4 5,568,828 - +0.7 5,568,828 - -0.9 5,568,868 - +0.5 5,568,922 + -1.2 5,568,939 - -3.3 5,568,944 + -0.4 5,568,957 - -2.0 5,568,964 + +3.6 5,568,964 + +1.4 5,568,965 - -4.4 5,568,999 + -2.2 5,568,999 + +0.1 5,568,999 + -0.6 5,568,999 + +0.0 5,568,999 + +1.4 5,568,999 + -0.8 5,568,999 + -3.9 5,568,999 + +0.8 5,568,999 + -0.5 5,568,999 + +0.1 5,568,999 + -0.8 5,568,999 + +4.6 5,568,999 + -1.9 5,569,000 - +0.5 5,569,000 - +0.1 5,569,000 - -0.6 5,569,000 - +0.9 5,569,000 - -1.8 5,569,000 - +0.8 5,569,000 - -2.0 5,569,000 - -1.7 5,569,019 + -1.5 5,569,019 + +0.2 5,569,019 + -1.8 5,569,019 + -0.1 5,569,020 - -1.3 5,569,020 - -0.8 5,569,020 - +1.6 5,569,103 + -3.7 5,569,272 + +2.2 5,569,272 + +4.7 5,569,272 + +3.3 5,569,334 + Psyr_4700 0.11 -1.2 5,569,335 - Psyr_4700 0.11 +1.1 5,569,508 + Psyr_4700 0.19 -0.0 5,569,509 - Psyr_4700 0.19 +1.0 5,569,509 - Psyr_4700 0.19 -0.9 5,569,571 + Psyr_4700 0.22 +0.5 5,569,571 + Psyr_4700 0.22 -2.7 5,569,571 + Psyr_4700 0.22 +1.5 5,569,571 + Psyr_4700 0.22 -0.7 5,569,572 - Psyr_4700 0.22 +1.7 5,569,572 - Psyr_4700 0.22 -1.3 5,569,572 - Psyr_4700 0.22 +3.4 5,569,573 + Psyr_4700 0.22 +4.2 5,569,573 + Psyr_4700 0.22 +1.7 5,569,573 + Psyr_4700 0.22 +1.2 5,569,574 - Psyr_4700 0.22 -0.3 5,569,670 + Psyr_4700 0.26 -0.4 5,569,670 + Psyr_4700 0.26 -0.8 5,569,670 + Psyr_4700 0.26 +0.3 5,569,670 + Psyr_4700 0.26 -0.2 5,569,670 + Psyr_4700 0.26 -1.8 5,569,670 + Psyr_4700 0.26 -0.2 5,569,670 + Psyr_4700 0.26 +0.4 5,569,671 - Psyr_4700 0.26 +0.4 5,569,671 - Psyr_4700 0.26 +2.4 5,569,671 - Psyr_4700 0.26 -1.3 5,569,671 - Psyr_4700 0.26 +4.6 5,569,671 - Psyr_4700 0.26 -0.5 5,569,671 - Psyr_4700 0.26 -3.4 5,569,671 - Psyr_4700 0.26 -3.6 5,569,671 - Psyr_4700 0.26 -1.8 5,569,671 - Psyr_4700 0.26 -0.3 5,569,671 - Psyr_4700 0.26 -0.3 5,569,671 - Psyr_4700 0.26 +3.8 5,569,671 - Psyr_4700 0.26 -0.0 5,569,672 + Psyr_4700 0.27 +1.8 5,569,672 + Psyr_4700 0.27 -1.2 5,569,672 + Psyr_4700 0.27 -0.2 5,569,672 + Psyr_4700 0.27 -3.1 5,569,673 - Psyr_4700 0.27 +1.5 5,569,673 - Psyr_4700 0.27 -0.6 5,569,673 - Psyr_4700 0.27 -0.2 5,569,673 - Psyr_4700 0.27 -1.1 5,570,054 + Psyr_4700 0.44 +0.0 5,570,055 - Psyr_4700 0.44 +0.8 5,570,267 + Psyr_4700 0.54 -2.5 5,570,267 + Psyr_4700 0.54 +1.1 5,570,267 + Psyr_4700 0.54 -1.7 5,570,267 + Psyr_4700 0.54 -3.4 5,570,267 + Psyr_4700 0.54 +2.4 5,570,267 + Psyr_4700 0.54 -2.0 5,570,267 + Psyr_4700 0.54 -1.9 5,570,267 + Psyr_4700 0.54 -0.8 5,570,267 + Psyr_4700 0.54 +0.3 5,570,267 + Psyr_4700 0.54 -0.7 5,570,268 - Psyr_4700 0.54 +3.4 5,570,268 - Psyr_4700 0.54 -1.4 5,570,268 - Psyr_4700 0.54 -0.8 5,570,268 - Psyr_4700 0.54 -1.5 5,570,268 - Psyr_4700 0.54 +0.5 5,570,268 - Psyr_4700 0.54 +1.2 5,570,344 - Psyr_4700 0.57 -3.3 5,570,344 - Psyr_4700 0.57 -1.0 5,570,909 + Psyr_4700 0.83 +0.8 5,570,909 + Psyr_4700 0.83 +0.7 5,570,913 + Psyr_4700 0.84 +0.8 5,570,913 + Psyr_4700 0.84 +2.4 5,570,913 + Psyr_4700 0.84 -0.1 5,570,913 + Psyr_4700 0.84 -3.7 5,570,913 + Psyr_4700 0.84 -1.0 5,570,914 - Psyr_4700 0.84 -1.8 5,570,914 - Psyr_4700 0.84 -1.5 5,570,914 - Psyr_4700 0.84 +2.0 5,570,914 - Psyr_4700 0.84 +0.8 5,570,914 - Psyr_4700 0.84 +0.4 5,571,122 + -2.1 5,571,269 + +0.0 5,571,270 - -2.3 5,571,270 - -1.5 5,571,344 + -0.9 5,571,344 + -1.1 5,571,386 - Psyr_4701 0.11 +1.0 5,571,769 + +0.8 5,571,770 - +1.8 5,571,770 - -1.3 5,571,824 - -0.2 5,571,947 + -3.3 5,571,947 + +0.6 5,571,947 + +4.2 5,571,947 + -0.7 5,571,948 - -1.5 5,571,948 - +1.2 5,571,948 - -0.0 5,571,948 - +0.3 5,571,995 - -1.4 5,572,071 + +0.8 5,572,071 + +4.7 5,572,071 + -0.2 5,572,071 + +2.4 5,572,071 + -1.6 5,572,071 + -1.9 5,572,071 + +0.8 5,572,071 + +0.8 5,572,071 + +3.4 5,572,071 + -1.3 5,572,072 - -2.3 5,572,072 - +0.3 5,572,140 - -0.8 5,572,223 + Psyr_4702 0.11 +0.3 5,572,223 + Psyr_4702 0.11 -0.2 5,572,223 + Psyr_4702 0.11 -1.7 5,572,224 - Psyr_4702 0.11 -0.6 5,572,224 - Psyr_4702 0.11 -2.5 5,572,224 - Psyr_4702 0.11 +1.8 5,572,224 - Psyr_4702 0.11 -0.7
Or see this region's nucleotide sequence