Experiment: KB with Mitomycin C 0.05 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4626 and Psyr_4627 overlap by 4 nucleotides Psyr_4627 and Psyr_4628 are separated by 95 nucleotides Psyr_4628 and Psyr_4629 overlap by 1 nucleotides Psyr_4629 and Psyr_4630 are separated by 23 nucleotides
Psyr_4626: Psyr_4626 - 4-hydroxythreonine-4-phosphate dehydrogenase, at 5,486,650 to 5,487,639
_4626
Psyr_4627: Psyr_4627 - dimethyladenosine transferase, at 5,487,636 to 5,488,442
_4627
Psyr_4628: Psyr_4628 - Protein of unknown function DUF525, at 5,488,538 to 5,488,939
_4628
Psyr_4629: Psyr_4629 - Bis(5'-nucleosyl)-tetraphosphatase (symmetrical), at 5,488,939 to 5,489,814
_4629
Psyr_4630: Psyr_4630 - thiosulfate sulfurtransferase, at 5,489,838 to 5,490,158
_4630
Position (kb) 5488
5489 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 5487.648 kb on + strand at 5487.973 kb on - strand, within Psyr_4627 at 5487.973 kb on - strand, within Psyr_4627 at 5487.973 kb on - strand, within Psyr_4627 at 5488.122 kb on + strand, within Psyr_4627 at 5488.457 kb on + strand at 5488.457 kb on + strand at 5488.457 kb on + strand at 5488.457 kb on + strand at 5488.457 kb on + strand at 5488.457 kb on + strand at 5488.458 kb on - strand at 5488.458 kb on - strand at 5488.458 kb on - strand at 5488.458 kb on - strand at 5488.458 kb on - strand at 5488.488 kb on + strand at 5488.488 kb on + strand at 5488.488 kb on + strand at 5488.489 kb on - strand at 5488.489 kb on - strand at 5488.489 kb on - strand at 5488.489 kb on - strand at 5488.489 kb on - strand at 5488.489 kb on - strand at 5488.489 kb on - strand at 5488.497 kb on + strand at 5488.497 kb on + strand at 5488.498 kb on - strand at 5488.507 kb on + strand at 5488.538 kb on - strand at 5488.553 kb on + strand at 5488.553 kb on + strand at 5488.652 kb on + strand, within Psyr_4628 at 5488.652 kb on + strand, within Psyr_4628 at 5488.684 kb on - strand, within Psyr_4628 at 5488.801 kb on + strand, within Psyr_4628 at 5488.801 kb on + strand, within Psyr_4628 at 5488.801 kb on + strand, within Psyr_4628 at 5488.801 kb on + strand, within Psyr_4628 at 5488.805 kb on + strand, within Psyr_4628 at 5488.805 kb on + strand, within Psyr_4628 at 5488.805 kb on + strand, within Psyr_4628 at 5488.805 kb on + strand, within Psyr_4628 at 5488.805 kb on + strand, within Psyr_4628 at 5488.805 kb on + strand, within Psyr_4628 at 5488.805 kb on + strand, within Psyr_4628 at 5488.805 kb on + strand, within Psyr_4628 at 5488.805 kb on + strand, within Psyr_4628 at 5488.805 kb on + strand, within Psyr_4628 at 5488.805 kb on + strand, within Psyr_4628 at 5488.805 kb on + strand, within Psyr_4628 at 5488.806 kb on - strand, within Psyr_4628 at 5488.816 kb on + strand, within Psyr_4628 at 5488.856 kb on + strand, within Psyr_4628 at 5488.856 kb on + strand, within Psyr_4628
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Mitomycin C 0.05 ug/ml remove 5,487,648 + -0.6 5,487,973 - Psyr_4627 0.42 +1.8 5,487,973 - Psyr_4627 0.42 +0.4 5,487,973 - Psyr_4627 0.42 +3.6 5,488,122 + Psyr_4627 0.60 -4.0 5,488,457 + -0.3 5,488,457 + -0.9 5,488,457 + -0.5 5,488,457 + -1.0 5,488,457 + +0.8 5,488,457 + -1.6 5,488,458 - -0.9 5,488,458 - +2.8 5,488,458 - +2.4 5,488,458 - +1.1 5,488,458 - +0.7 5,488,488 + -1.2 5,488,488 + -0.7 5,488,488 + +3.6 5,488,489 - -0.3 5,488,489 - +4.6 5,488,489 - +1.8 5,488,489 - +4.1 5,488,489 - +0.1 5,488,489 - -1.6 5,488,489 - -2.0 5,488,497 + -0.8 5,488,497 + -0.2 5,488,498 - +0.2 5,488,507 + -0.9 5,488,538 - -2.2 5,488,553 + -0.9 5,488,553 + -0.7 5,488,652 + Psyr_4628 0.28 -0.8 5,488,652 + Psyr_4628 0.28 -0.2 5,488,684 - Psyr_4628 0.36 -1.9 5,488,801 + Psyr_4628 0.65 +0.7 5,488,801 + Psyr_4628 0.65 -0.4 5,488,801 + Psyr_4628 0.65 +3.6 5,488,801 + Psyr_4628 0.65 +2.8 5,488,805 + Psyr_4628 0.66 -0.4 5,488,805 + Psyr_4628 0.66 +1.0 5,488,805 + Psyr_4628 0.66 -0.4 5,488,805 + Psyr_4628 0.66 +0.8 5,488,805 + Psyr_4628 0.66 -1.8 5,488,805 + Psyr_4628 0.66 +0.3 5,488,805 + Psyr_4628 0.66 -0.7 5,488,805 + Psyr_4628 0.66 +0.4 5,488,805 + Psyr_4628 0.66 -1.8 5,488,805 + Psyr_4628 0.66 -0.8 5,488,805 + Psyr_4628 0.66 +0.1 5,488,805 + Psyr_4628 0.66 +1.4 5,488,806 - Psyr_4628 0.67 -0.8 5,488,816 + Psyr_4628 0.69 -0.5 5,488,856 + Psyr_4628 0.79 -3.3 5,488,856 + Psyr_4628 0.79 +1.3
Or see this region's nucleotide sequence