Experiment: KB with Mitomycin C 0.05 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4234 and Psyr_4235 are separated by 257 nucleotides Psyr_4235 and Psyr_4236 are separated by 318 nucleotides
Psyr_4234: Psyr_4234 - extracellular solute-binding protein, family 5, at 5,042,907 to 5,044,514
_4234
Psyr_4235: Psyr_4235 - extracellular solute-binding protein, family 5, at 5,044,772 to 5,046,400
_4235
Psyr_4236: Psyr_4236 - extracellular solute-binding protein, family 5, at 5,046,719 to 5,048,311
_4236
Position (kb) 5044
5045
5046
5047 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3
4
5 at 5043.789 kb on + strand, within Psyr_4234 at 5043.789 kb on + strand, within Psyr_4234 at 5043.789 kb on + strand, within Psyr_4234 at 5043.790 kb on - strand, within Psyr_4234 at 5043.880 kb on - strand, within Psyr_4234 at 5044.134 kb on + strand, within Psyr_4234 at 5044.134 kb on + strand, within Psyr_4234 at 5044.134 kb on + strand, within Psyr_4234 at 5044.135 kb on - strand, within Psyr_4234 at 5044.149 kb on + strand, within Psyr_4234 at 5044.149 kb on + strand, within Psyr_4234 at 5044.149 kb on + strand, within Psyr_4234 at 5044.149 kb on + strand, within Psyr_4234 at 5044.149 kb on + strand, within Psyr_4234 at 5044.149 kb on + strand, within Psyr_4234 at 5044.149 kb on + strand, within Psyr_4234 at 5044.149 kb on + strand, within Psyr_4234 at 5044.150 kb on - strand, within Psyr_4234 at 5044.150 kb on - strand, within Psyr_4234 at 5044.150 kb on - strand, within Psyr_4234 at 5044.150 kb on - strand, within Psyr_4234 at 5044.150 kb on - strand, within Psyr_4234 at 5044.150 kb on - strand, within Psyr_4234 at 5044.150 kb on - strand, within Psyr_4234 at 5044.150 kb on - strand, within Psyr_4234 at 5044.191 kb on + strand, within Psyr_4234 at 5044.191 kb on + strand, within Psyr_4234 at 5044.208 kb on + strand, within Psyr_4234 at 5044.242 kb on + strand, within Psyr_4234 at 5044.243 kb on - strand, within Psyr_4234 at 5044.272 kb on + strand, within Psyr_4234 at 5044.273 kb on - strand, within Psyr_4234 at 5044.273 kb on - strand, within Psyr_4234 at 5044.356 kb on + strand at 5044.357 kb on - strand at 5044.357 kb on - strand at 5044.357 kb on - strand at 5044.357 kb on - strand at 5044.357 kb on - strand at 5044.485 kb on + strand at 5044.485 kb on + strand at 5044.485 kb on + strand at 5044.485 kb on + strand at 5044.485 kb on + strand at 5044.486 kb on - strand at 5044.512 kb on + strand at 5044.512 kb on + strand at 5044.512 kb on + strand at 5044.513 kb on - strand at 5044.606 kb on + strand at 5044.618 kb on + strand at 5044.704 kb on + strand at 5044.704 kb on + strand at 5044.704 kb on + strand at 5044.704 kb on + strand at 5044.704 kb on + strand at 5044.704 kb on + strand at 5044.705 kb on - strand at 5044.705 kb on - strand at 5044.705 kb on - strand at 5044.705 kb on - strand at 5044.705 kb on - strand at 5044.705 kb on - strand at 5044.705 kb on - strand at 5044.705 kb on - strand at 5044.705 kb on - strand at 5044.705 kb on - strand at 5044.708 kb on + strand at 5044.709 kb on - strand at 5044.709 kb on - strand at 5044.742 kb on + strand at 5044.901 kb on + strand at 5044.901 kb on + strand at 5044.913 kb on - strand at 5045.033 kb on + strand, within Psyr_4235 at 5045.033 kb on + strand, within Psyr_4235 at 5045.033 kb on + strand, within Psyr_4235 at 5045.033 kb on + strand, within Psyr_4235 at 5045.033 kb on + strand, within Psyr_4235 at 5045.034 kb on - strand, within Psyr_4235 at 5045.034 kb on - strand, within Psyr_4235 at 5045.034 kb on - strand, within Psyr_4235 at 5045.034 kb on - strand, within Psyr_4235 at 5045.034 kb on - strand, within Psyr_4235 at 5045.034 kb on - strand, within Psyr_4235 at 5045.034 kb on - strand, within Psyr_4235 at 5045.078 kb on + strand, within Psyr_4235 at 5045.078 kb on + strand, within Psyr_4235 at 5045.186 kb on + strand, within Psyr_4235 at 5045.330 kb on + strand, within Psyr_4235 at 5045.330 kb on + strand, within Psyr_4235 at 5045.331 kb on - strand, within Psyr_4235 at 5045.414 kb on + strand, within Psyr_4235 at 5045.645 kb on + strand, within Psyr_4235 at 5045.646 kb on - strand, within Psyr_4235 at 5045.646 kb on - strand, within Psyr_4235 at 5045.822 kb on + strand, within Psyr_4235 at 5045.823 kb on - strand, within Psyr_4235 at 5045.823 kb on - strand, within Psyr_4235 at 5045.823 kb on - strand, within Psyr_4235 at 5045.849 kb on + strand, within Psyr_4235 at 5045.849 kb on + strand, within Psyr_4235 at 5045.849 kb on + strand, within Psyr_4235 at 5045.850 kb on - strand, within Psyr_4235 at 5045.850 kb on - strand, within Psyr_4235 at 5045.850 kb on - strand, within Psyr_4235 at 5045.850 kb on - strand, within Psyr_4235 at 5045.850 kb on - strand, within Psyr_4235 at 5045.850 kb on - strand, within Psyr_4235 at 5045.943 kb on - strand, within Psyr_4235 at 5045.943 kb on - strand, within Psyr_4235 at 5045.943 kb on - strand, within Psyr_4235 at 5045.943 kb on - strand, within Psyr_4235 at 5046.023 kb on + strand, within Psyr_4235 at 5046.023 kb on + strand, within Psyr_4235 at 5046.024 kb on - strand, within Psyr_4235 at 5046.024 kb on - strand, within Psyr_4235 at 5046.024 kb on - strand, within Psyr_4235 at 5046.024 kb on - strand, within Psyr_4235 at 5046.024 kb on - strand, within Psyr_4235 at 5046.024 kb on - strand, within Psyr_4235 at 5046.024 kb on - strand, within Psyr_4235 at 5046.038 kb on + strand, within Psyr_4235 at 5046.038 kb on + strand, within Psyr_4235 at 5046.039 kb on - strand, within Psyr_4235 at 5046.039 kb on - strand, within Psyr_4235 at 5046.039 kb on - strand, within Psyr_4235 at 5046.245 kb on + strand at 5046.245 kb on + strand at 5046.245 kb on + strand at 5046.245 kb on + strand at 5046.246 kb on - strand at 5046.246 kb on - strand at 5046.246 kb on - strand at 5046.246 kb on - strand at 5046.246 kb on - strand at 5046.246 kb on - strand at 5046.311 kb on + strand at 5046.312 kb on - strand at 5046.333 kb on + strand at 5046.333 kb on + strand at 5046.334 kb on - strand at 5046.374 kb on + strand at 5046.374 kb on + strand at 5046.374 kb on + strand at 5046.398 kb on + strand at 5046.398 kb on + strand at 5046.446 kb on + strand at 5046.447 kb on - strand at 5046.447 kb on - strand at 5046.447 kb on - strand at 5046.447 kb on - strand at 5046.456 kb on + strand at 5046.456 kb on + strand at 5046.456 kb on + strand at 5046.456 kb on + strand at 5046.457 kb on - strand at 5046.457 kb on - strand at 5046.457 kb on - strand at 5046.457 kb on - strand at 5046.457 kb on - strand at 5046.457 kb on - strand at 5046.502 kb on + strand at 5046.502 kb on + strand at 5046.503 kb on - strand at 5046.503 kb on - strand at 5046.505 kb on + strand at 5046.505 kb on + strand at 5046.506 kb on - strand at 5046.506 kb on - strand at 5046.511 kb on + strand at 5046.512 kb on - strand at 5046.512 kb on - strand at 5046.516 kb on + strand at 5046.516 kb on + strand at 5046.516 kb on + strand at 5046.517 kb on - strand at 5046.517 kb on - strand at 5046.517 kb on - strand at 5046.517 kb on - strand at 5046.517 kb on - strand at 5046.517 kb on - strand at 5046.517 kb on - strand at 5046.523 kb on + strand at 5046.547 kb on + strand at 5046.547 kb on + strand at 5046.547 kb on + strand at 5046.547 kb on + strand at 5046.547 kb on + strand at 5046.547 kb on + strand at 5046.547 kb on + strand at 5046.547 kb on + strand at 5046.547 kb on + strand at 5046.547 kb on + strand at 5046.548 kb on - strand at 5046.548 kb on - strand at 5046.548 kb on - strand at 5046.548 kb on - strand at 5046.548 kb on - strand at 5046.548 kb on - strand at 5046.548 kb on - strand at 5046.548 kb on - strand at 5046.549 kb on + strand at 5046.549 kb on + strand at 5046.550 kb on - strand at 5046.550 kb on - strand at 5046.550 kb on - strand at 5046.551 kb on + strand at 5046.551 kb on + strand at 5046.552 kb on - strand at 5046.552 kb on - strand at 5046.552 kb on - strand at 5046.572 kb on + strand at 5046.572 kb on + strand at 5046.675 kb on + strand at 5046.675 kb on + strand at 5046.675 kb on + strand at 5046.675 kb on + strand at 5046.675 kb on + strand at 5046.675 kb on + strand at 5046.676 kb on - strand at 5046.676 kb on - strand at 5046.676 kb on - strand at 5046.676 kb on - strand at 5046.676 kb on - strand at 5046.676 kb on - strand at 5046.679 kb on + strand at 5046.679 kb on + strand at 5046.679 kb on + strand at 5046.680 kb on - strand at 5046.680 kb on - strand at 5046.680 kb on - strand at 5046.680 kb on - strand at 5046.680 kb on - strand at 5046.680 kb on - strand at 5046.680 kb on - strand at 5046.682 kb on + strand at 5046.683 kb on - strand at 5046.683 kb on - strand at 5046.683 kb on - strand at 5046.683 kb on - strand at 5046.724 kb on + strand at 5046.724 kb on + strand at 5046.725 kb on - strand at 5046.843 kb on - strand at 5046.843 kb on - strand at 5046.881 kb on + strand, within Psyr_4236 at 5046.882 kb on - strand, within Psyr_4236 at 5046.882 kb on - strand, within Psyr_4236 at 5046.882 kb on - strand, within Psyr_4236 at 5046.882 kb on - strand, within Psyr_4236 at 5046.882 kb on - strand, within Psyr_4236 at 5046.913 kb on + strand, within Psyr_4236 at 5046.971 kb on + strand, within Psyr_4236 at 5047.125 kb on - strand, within Psyr_4236 at 5047.205 kb on - strand, within Psyr_4236 at 5047.376 kb on + strand, within Psyr_4236 at 5047.377 kb on - strand, within Psyr_4236
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Mitomycin C 0.05 ug/ml remove 5,043,789 + Psyr_4234 0.55 -0.7 5,043,789 + Psyr_4234 0.55 +0.1 5,043,789 + Psyr_4234 0.55 -0.7 5,043,790 - Psyr_4234 0.55 +2.2 5,043,880 - Psyr_4234 0.61 +2.9 5,044,134 + Psyr_4234 0.76 +3.3 5,044,134 + Psyr_4234 0.76 -0.7 5,044,134 + Psyr_4234 0.76 +1.6 5,044,135 - Psyr_4234 0.76 -1.1 5,044,149 + Psyr_4234 0.77 -3.5 5,044,149 + Psyr_4234 0.77 +2.8 5,044,149 + Psyr_4234 0.77 -0.2 5,044,149 + Psyr_4234 0.77 -0.1 5,044,149 + Psyr_4234 0.77 -1.6 5,044,149 + Psyr_4234 0.77 +4.3 5,044,149 + Psyr_4234 0.77 -1.7 5,044,149 + Psyr_4234 0.77 -0.5 5,044,150 - Psyr_4234 0.77 +2.4 5,044,150 - Psyr_4234 0.77 -1.1 5,044,150 - Psyr_4234 0.77 +1.9 5,044,150 - Psyr_4234 0.77 -1.3 5,044,150 - Psyr_4234 0.77 -0.6 5,044,150 - Psyr_4234 0.77 +0.1 5,044,150 - Psyr_4234 0.77 -1.9 5,044,150 - Psyr_4234 0.77 +1.2 5,044,191 + Psyr_4234 0.80 -0.0 5,044,191 + Psyr_4234 0.80 +5.4 5,044,208 + Psyr_4234 0.81 +0.9 5,044,242 + Psyr_4234 0.83 -5.0 5,044,243 - Psyr_4234 0.83 +1.2 5,044,272 + Psyr_4234 0.85 -0.3 5,044,273 - Psyr_4234 0.85 -2.1 5,044,273 - Psyr_4234 0.85 -1.1 5,044,356 + -0.8 5,044,357 - +0.3 5,044,357 - +2.4 5,044,357 - -0.5 5,044,357 - +5.5 5,044,357 - +0.9 5,044,485 + +1.4 5,044,485 + +0.7 5,044,485 + +0.2 5,044,485 + -0.4 5,044,485 + +1.0 5,044,486 - -1.3 5,044,512 + -0.3 5,044,512 + +0.4 5,044,512 + -1.2 5,044,513 - -0.4 5,044,606 + -1.5 5,044,618 + -0.4 5,044,704 + -0.9 5,044,704 + +0.9 5,044,704 + -1.3 5,044,704 + +0.2 5,044,704 + +0.9 5,044,704 + +3.2 5,044,705 - +4.9 5,044,705 - -0.9 5,044,705 - -2.0 5,044,705 - +3.4 5,044,705 - -2.9 5,044,705 - +0.5 5,044,705 - -4.0 5,044,705 - +2.0 5,044,705 - -0.8 5,044,705 - +0.0 5,044,708 + +4.2 5,044,709 - +5.6 5,044,709 - -0.1 5,044,742 + +0.9 5,044,901 + -0.0 5,044,901 + -0.3 5,044,913 - +1.2 5,045,033 + Psyr_4235 0.16 -1.5 5,045,033 + Psyr_4235 0.16 +0.6 5,045,033 + Psyr_4235 0.16 -1.7 5,045,033 + Psyr_4235 0.16 -1.3 5,045,033 + Psyr_4235 0.16 -0.6 5,045,034 - Psyr_4235 0.16 -1.4 5,045,034 - Psyr_4235 0.16 +3.9 5,045,034 - Psyr_4235 0.16 +4.0 5,045,034 - Psyr_4235 0.16 +0.3 5,045,034 - Psyr_4235 0.16 +0.5 5,045,034 - Psyr_4235 0.16 +1.4 5,045,034 - Psyr_4235 0.16 +1.0 5,045,078 + Psyr_4235 0.19 -2.1 5,045,078 + Psyr_4235 0.19 -1.7 5,045,186 + Psyr_4235 0.25 +2.4 5,045,330 + Psyr_4235 0.34 -0.0 5,045,330 + Psyr_4235 0.34 -0.9 5,045,331 - Psyr_4235 0.34 -0.3 5,045,414 + Psyr_4235 0.39 +1.4 5,045,645 + Psyr_4235 0.54 +2.9 5,045,646 - Psyr_4235 0.54 +0.9 5,045,646 - Psyr_4235 0.54 +4.9 5,045,822 + Psyr_4235 0.64 +0.9 5,045,823 - Psyr_4235 0.65 +0.7 5,045,823 - Psyr_4235 0.65 +1.1 5,045,823 - Psyr_4235 0.65 +0.1 5,045,849 + Psyr_4235 0.66 -0.6 5,045,849 + Psyr_4235 0.66 +3.7 5,045,849 + Psyr_4235 0.66 -3.9 5,045,850 - Psyr_4235 0.66 +0.4 5,045,850 - Psyr_4235 0.66 -0.0 5,045,850 - Psyr_4235 0.66 -0.6 5,045,850 - Psyr_4235 0.66 +0.7 5,045,850 - Psyr_4235 0.66 +2.1 5,045,850 - Psyr_4235 0.66 -0.5 5,045,943 - Psyr_4235 0.72 +5.6 5,045,943 - Psyr_4235 0.72 +1.7 5,045,943 - Psyr_4235 0.72 -0.4 5,045,943 - Psyr_4235 0.72 +0.4 5,046,023 + Psyr_4235 0.77 +4.9 5,046,023 + Psyr_4235 0.77 -0.8 5,046,024 - Psyr_4235 0.77 +1.0 5,046,024 - Psyr_4235 0.77 -0.9 5,046,024 - Psyr_4235 0.77 +2.4 5,046,024 - Psyr_4235 0.77 -1.5 5,046,024 - Psyr_4235 0.77 +4.4 5,046,024 - Psyr_4235 0.77 -0.0 5,046,024 - Psyr_4235 0.77 -0.9 5,046,038 + Psyr_4235 0.78 -3.8 5,046,038 + Psyr_4235 0.78 -1.0 5,046,039 - Psyr_4235 0.78 -2.6 5,046,039 - Psyr_4235 0.78 -2.2 5,046,039 - Psyr_4235 0.78 -0.8 5,046,245 + -0.3 5,046,245 + +1.9 5,046,245 + -1.1 5,046,245 + +0.2 5,046,246 - -1.8 5,046,246 - -1.1 5,046,246 - +2.1 5,046,246 - +3.4 5,046,246 - -1.0 5,046,246 - +0.9 5,046,311 + -1.7 5,046,312 - +0.9 5,046,333 + -0.5 5,046,333 + -1.7 5,046,334 - +1.8 5,046,374 + +0.1 5,046,374 + -0.7 5,046,374 + +0.9 5,046,398 + -0.9 5,046,398 + -1.9 5,046,446 + -1.7 5,046,447 - +1.0 5,046,447 - +2.4 5,046,447 - +2.0 5,046,447 - +0.4 5,046,456 + -1.1 5,046,456 + -0.3 5,046,456 + +0.4 5,046,456 + -1.7 5,046,457 - +0.5 5,046,457 - +0.9 5,046,457 - +3.2 5,046,457 - -0.5 5,046,457 - -0.1 5,046,457 - +1.0 5,046,502 + -0.8 5,046,502 + -0.2 5,046,503 - -2.6 5,046,503 - +0.9 5,046,505 + -1.7 5,046,505 + -1.6 5,046,506 - +2.9 5,046,506 - +0.3 5,046,511 + -1.1 5,046,512 - +0.9 5,046,512 - -1.3 5,046,516 + +0.4 5,046,516 + +0.1 5,046,516 + +3.7 5,046,517 - +0.9 5,046,517 - +4.6 5,046,517 - +0.3 5,046,517 - +0.9 5,046,517 - +0.3 5,046,517 - -0.9 5,046,517 - +2.9 5,046,523 + +0.9 5,046,547 + -1.1 5,046,547 + -0.5 5,046,547 + -1.0 5,046,547 + -3.3 5,046,547 + +0.9 5,046,547 + -0.8 5,046,547 + -0.6 5,046,547 + -0.0 5,046,547 + -0.6 5,046,547 + +0.9 5,046,548 - -0.1 5,046,548 - -0.8 5,046,548 - +0.7 5,046,548 - +1.9 5,046,548 - +0.1 5,046,548 - +1.7 5,046,548 - -2.6 5,046,548 - -0.8 5,046,549 + -2.6 5,046,549 + -3.3 5,046,550 - -1.2 5,046,550 - -0.4 5,046,550 - +0.2 5,046,551 + -3.0 5,046,551 + -1.0 5,046,552 - +1.1 5,046,552 - +1.2 5,046,552 - +0.9 5,046,572 + -1.4 5,046,572 + +0.9 5,046,675 + +0.2 5,046,675 + +0.2 5,046,675 + -2.3 5,046,675 + -2.3 5,046,675 + -0.7 5,046,675 + -1.8 5,046,676 - -1.9 5,046,676 - -0.4 5,046,676 - +5.1 5,046,676 - +0.6 5,046,676 - +1.5 5,046,676 - +1.5 5,046,679 + -0.3 5,046,679 + +0.9 5,046,679 + +0.1 5,046,680 - +1.4 5,046,680 - +4.2 5,046,680 - +0.1 5,046,680 - -0.2 5,046,680 - +0.4 5,046,680 - +2.4 5,046,680 - -0.1 5,046,682 + +0.1 5,046,683 - -2.1 5,046,683 - +3.7 5,046,683 - -1.6 5,046,683 - -3.3 5,046,724 + +0.9 5,046,724 + -0.4 5,046,725 - -2.2 5,046,843 - +3.2 5,046,843 - +0.1 5,046,881 + Psyr_4236 0.10 -1.4 5,046,882 - Psyr_4236 0.10 +0.3 5,046,882 - Psyr_4236 0.10 +1.2 5,046,882 - Psyr_4236 0.10 +2.7 5,046,882 - Psyr_4236 0.10 -0.5 5,046,882 - Psyr_4236 0.10 +0.2 5,046,913 + Psyr_4236 0.12 -0.3 5,046,971 + Psyr_4236 0.16 -0.3 5,047,125 - Psyr_4236 0.25 -1.1 5,047,205 - Psyr_4236 0.31 +0.4 5,047,376 + Psyr_4236 0.41 +1.9 5,047,377 - Psyr_4236 0.41 -1.8
Or see this region's nucleotide sequence