Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_3164

Experiment: KB with Mitomycin C 0.05 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.05 ug/ml
3,792,143	+		Psyr_3163	0.66	+2.7
3,792,143	+		Psyr_3163	0.66	+3.3
3,792,144	-		Psyr_3163	0.66	+0.7
3,792,144	-		Psyr_3163	0.66	-0.7
3,792,144	-		Psyr_3163	0.66	+2.3
3,792,144	-		Psyr_3163	0.66	-1.9
3,792,161	+		Psyr_3163	0.67	-3.1
3,792,203	+		Psyr_3163	0.70	+0.3
3,792,239	+		Psyr_3163	0.72	+3.3
3,792,239	+		Psyr_3163	0.72	+2.3
3,792,239	+		Psyr_3163	0.72	+0.7
3,792,240	-		Psyr_3163	0.72	+1.7
3,792,240	-		Psyr_3163	0.72	-1.4
3,792,240	-		Psyr_3163	0.72	+1.2
3,792,255	+		Psyr_3163	0.74	+2.2
3,792,255	+		Psyr_3163	0.74	-0.2
3,792,255	+		Psyr_3163	0.74	-1.5
3,792,255	+		Psyr_3163	0.74	-1.3
3,792,256	-		Psyr_3163	0.74	+1.1
3,792,256	-		Psyr_3163	0.74	-1.1
3,792,256	-		Psyr_3163	0.74	-0.2
3,792,256	-		Psyr_3163	0.74	-1.9
3,792,329	-		Psyr_3163	0.79	+3.3
3,792,416	+		Psyr_3163	0.85	-1.8
3,792,416	+		Psyr_3163	0.85	+3.0
3,792,416	+		Psyr_3163	0.85	-3.5
3,792,416	+		Psyr_3163	0.85	-2.6
3,792,416	+		Psyr_3163	0.85	-1.3
3,792,417	-		Psyr_3163	0.85	-1.3
3,792,417	-		Psyr_3163	0.85	-1.9
3,792,417	-		Psyr_3163	0.85	+0.7
3,792,417	-		Psyr_3163	0.85	-0.1
3,792,477	+		Psyr_3163	0.89	-1.6
3,792,477	+		Psyr_3163	0.89	+0.1
3,792,477	+		Psyr_3163	0.89	-0.9
3,792,477	+		Psyr_3163	0.89	+0.7
3,792,479	+		Psyr_3163	0.89	+3.0
3,792,479	+		Psyr_3163	0.89	+0.7
3,792,480	-		Psyr_3163	0.89	+3.0
3,792,504	-				+1.4
3,792,545	+				-2.5
3,792,546	-				+0.6
3,792,672	-				-0.0
3,792,672	-				-0.1
3,792,820	-				+2.1
3,792,846	+				-2.4
3,792,846	+				+0.5
3,792,931	+				+3.5
3,792,932	-				+0.7
3,793,114	-				-1.2
3,793,170	+				-4.5
3,793,172	+				+0.7
3,793,172	+				-3.8
3,793,172	+				-1.5
3,793,173	-				+2.3
3,793,173	-				-1.9
3,793,173	-				+3.5
3,793,173	-				+0.0
3,793,173	-				-1.6
3,793,181	-				-2.3
3,793,184	+				+2.3
3,793,184	+				-2.0
3,793,184	+				+0.8
3,793,184	+				+2.3
3,793,185	-		Psyr_3164	0.10	-0.7
3,793,185	-		Psyr_3164	0.10	+1.7
3,793,185	-		Psyr_3164	0.10	-0.1
3,793,185	-		Psyr_3164	0.10	-1.3
3,793,185	-		Psyr_3164	0.10	-0.3
3,793,185	-		Psyr_3164	0.10	-1.3
3,793,185	-		Psyr_3164	0.10	-1.0
3,793,208	+		Psyr_3164	0.14	-2.0
3,793,208	+		Psyr_3164	0.14	-1.5
3,793,208	+		Psyr_3164	0.14	-3.5
3,793,208	+		Psyr_3164	0.14	-1.6
3,793,209	-		Psyr_3164	0.14	+2.7
3,793,209	-		Psyr_3164	0.14	-0.2
3,793,209	-		Psyr_3164	0.14	-2.8
3,793,209	-		Psyr_3164	0.14	+1.7
3,793,209	-		Psyr_3164	0.14	-1.2
3,793,209	-		Psyr_3164	0.14	+2.3
3,793,209	-		Psyr_3164	0.14	+3.5
3,793,209	-		Psyr_3164	0.14	-1.0
3,793,212	+		Psyr_3164	0.14	+0.7
3,793,408	+		Psyr_3164	0.43	-0.8
3,793,408	+		Psyr_3164	0.43	+0.7
3,793,408	+		Psyr_3164	0.43	-0.5
3,793,409	-		Psyr_3164	0.43	-0.9
3,793,409	-		Psyr_3164	0.43	+0.7
3,793,409	-		Psyr_3164	0.43	+0.7
3,793,409	-		Psyr_3164	0.43	-1.8
3,793,409	-		Psyr_3164	0.43	+0.1
3,793,412	+		Psyr_3164	0.44	-0.3
3,793,413	-		Psyr_3164	0.44	+1.0
3,793,413	-		Psyr_3164	0.44	-3.2
3,793,604	+		Psyr_3164	0.72	+0.7
3,793,604	+		Psyr_3164	0.72	-0.9
3,793,605	-		Psyr_3164	0.73	+0.6
3,793,605	-		Psyr_3164	0.73	-0.0
3,793,605	-		Psyr_3164	0.73	-0.9
3,793,605	-		Psyr_3164	0.73	+0.7
3,793,605	-		Psyr_3164	0.73	-1.4
3,793,709	+		Psyr_3164	0.88	+0.4
3,793,713	+		Psyr_3164	0.89	-2.0
3,793,714	-		Psyr_3164	0.89	-1.4
3,793,764	+				-2.5
3,794,100	+				-0.1
3,794,103	-				+1.7
3,794,119	+				-2.0
3,794,326	-		Psyr_3165	0.20	-2.0
3,794,458	+		Psyr_3165	0.35	-3.0
3,794,458	+		Psyr_3165	0.35	+4.4
3,794,461	+		Psyr_3165	0.35	+0.0
3,794,461	+		Psyr_3165	0.35	+2.7
3,794,461	+		Psyr_3165	0.35	+0.7
3,794,461	+		Psyr_3165	0.35	-0.7
3,794,461	+		Psyr_3165	0.35	-1.7
3,794,461	+		Psyr_3165	0.35	+2.3
3,794,461	+		Psyr_3165	0.35	+1.7
3,794,461	+		Psyr_3165	0.35	-1.3
3,794,461	+		Psyr_3165	0.35	-2.6
3,794,644	+		Psyr_3165	0.55	-0.8
3,794,648	+		Psyr_3165	0.56	+3.3
3,794,648	+		Psyr_3165	0.56	-1.8
3,794,648	+		Psyr_3165	0.56	+0.3
3,794,648	+		Psyr_3165	0.56	-0.9
3,794,649	-		Psyr_3165	0.56	+0.5
3,794,649	-		Psyr_3165	0.56	+3.9
3,794,680	-		Psyr_3165	0.59	-0.5
3,794,710	+		Psyr_3165	0.63	-0.5
3,794,710	+		Psyr_3165	0.63	-0.7
3,794,710	+		Psyr_3165	0.63	-1.5
3,794,722	+		Psyr_3165	0.64	+0.0
3,794,722	+		Psyr_3165	0.64	+3.3
3,794,723	-		Psyr_3165	0.64	-2.8
3,794,723	-		Psyr_3165	0.64	-4.5
3,794,723	-		Psyr_3165	0.64	+2.3
3,794,723	-		Psyr_3165	0.64	-0.3