Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_2723

Experiment: KB with Mitomycin C 0.05 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.05 ug/ml
3,304,213	+				+1.3
3,304,214	-				-0.3
3,304,478	+		Psyr_2722	0.27	+2.1
3,304,479	-		Psyr_2722	0.27	-0.6
3,304,530	+		Psyr_2722	0.34	-1.1
3,304,531	-		Psyr_2722	0.34	-2.4
3,304,599	+		Psyr_2722	0.43	+0.1
3,304,599	+		Psyr_2722	0.43	-0.9
3,304,600	-		Psyr_2722	0.43	+1.0
3,304,600	-		Psyr_2722	0.43	+0.1
3,304,600	-		Psyr_2722	0.43	-1.7
3,304,680	+		Psyr_2722	0.54	-0.9
3,304,680	+		Psyr_2722	0.54	-1.8
3,304,680	+		Psyr_2722	0.54	+2.5
3,304,680	+		Psyr_2722	0.54	+0.5
3,304,680	+		Psyr_2722	0.54	+0.1
3,304,680	+		Psyr_2722	0.54	+1.7
3,304,680	+		Psyr_2722	0.54	+0.8
3,304,681	-		Psyr_2722	0.54	+1.1
3,304,681	-		Psyr_2722	0.54	-1.8
3,304,681	-		Psyr_2722	0.54	-0.7
3,304,681	-		Psyr_2722	0.54	+1.7
3,304,681	-		Psyr_2722	0.54	-2.1
3,304,681	-		Psyr_2722	0.54	-0.3
3,304,681	-		Psyr_2722	0.54	-2.1
3,304,681	-		Psyr_2722	0.54	-2.2
3,304,709	+		Psyr_2722	0.58	-1.5
3,304,759	-		Psyr_2722	0.64	-1.0
3,304,759	-		Psyr_2722	0.64	+0.1
3,304,759	-		Psyr_2722	0.64	-0.3
3,304,799	-		Psyr_2722	0.69	-1.7
3,304,799	-		Psyr_2722	0.69	+0.8
3,304,799	-		Psyr_2722	0.69	+0.1
3,304,799	-		Psyr_2722	0.69	-3.4
3,304,799	-		Psyr_2722	0.69	-1.0
3,304,799	-		Psyr_2722	0.69	+2.7
3,304,799	-		Psyr_2722	0.69	-3.4
3,304,799	-		Psyr_2722	0.69	+2.7
3,304,942	+		Psyr_2722	0.88	-2.2
3,304,944	+		Psyr_2722	0.89	+2.5
3,304,944	+		Psyr_2722	0.89	-1.3
3,304,944	+		Psyr_2722	0.89	-1.0
3,304,944	+		Psyr_2722	0.89	-1.6
3,304,944	+		Psyr_2722	0.89	+3.3
3,304,944	+		Psyr_2722	0.89	+1.1
3,304,944	+		Psyr_2722	0.89	-1.6
3,304,944	+		Psyr_2722	0.89	+0.1
3,304,945	-		Psyr_2722	0.89	-0.2
3,304,945	-		Psyr_2722	0.89	+3.3
3,304,945	-		Psyr_2722	0.89	-2.7
3,304,945	-		Psyr_2722	0.89	-0.6
3,304,945	-		Psyr_2722	0.89	+4.0
3,304,945	-		Psyr_2722	0.89	-1.4
3,304,945	-		Psyr_2722	0.89	-3.9
3,304,945	-		Psyr_2722	0.89	+0.1
3,304,945	-		Psyr_2722	0.89	+0.1
3,304,945	-		Psyr_2722	0.89	-1.6
3,305,127	+				-1.0
3,305,184	+				+0.1
3,305,184	+				-0.0
3,305,184	+				+4.1
3,305,184	+				+3.0
3,305,184	+				-0.6
3,305,184	+				+1.1
3,305,184	+				-1.7
3,305,184	+				-3.0
3,305,185	-				+1.9
3,305,185	-				+0.9
3,305,185	-				+2.1
3,305,185	-				-2.4
3,305,185	-				+0.1
3,305,185	-				-0.3
3,305,212	+				-1.7
3,305,212	+				-0.9
3,305,313	+		Psyr_2723	0.14	+2.5
3,305,314	-		Psyr_2723	0.14	-3.7
3,305,395	+		Psyr_2723	0.23	-2.4
3,305,395	+		Psyr_2723	0.23	-2.7
3,305,395	+		Psyr_2723	0.23	-0.5
3,305,396	-		Psyr_2723	0.23	+0.1
3,305,396	-		Psyr_2723	0.23	-1.4
3,305,462	+		Psyr_2723	0.30	-1.5
3,305,483	-		Psyr_2723	0.32	+1.7
3,305,483	-		Psyr_2723	0.32	-1.9
3,305,655	+		Psyr_2723	0.51	+0.1
3,305,655	+		Psyr_2723	0.51	+2.7
3,305,656	-		Psyr_2723	0.51	-2.4
3,305,656	-		Psyr_2723	0.51	-1.0
3,305,761	+		Psyr_2723	0.63	-0.1
3,305,761	+		Psyr_2723	0.63	-3.3
3,305,761	+		Psyr_2723	0.63	-3.1
3,305,761	+		Psyr_2723	0.63	-1.0
3,305,761	+		Psyr_2723	0.63	-1.7
3,305,762	-		Psyr_2723	0.63	+0.6
3,305,762	-		Psyr_2723	0.63	-2.9
3,305,762	-		Psyr_2723	0.63	-4.5
3,305,762	-		Psyr_2723	0.63	+2.1
3,305,762	-		Psyr_2723	0.63	+1.1
3,305,763	+		Psyr_2723	0.63	-0.6
3,306,053	-				-0.0
3,306,155	+				+0.1
3,306,156	-				-2.3
3,306,575	+		Psyr_2724	0.75	+1.1
3,306,727	+				+1.1
3,306,727	+				+2.5
3,306,728	-				-2.5
3,306,728	-				+0.1
3,306,931	-		Psyr_2725	0.18	+2.5