Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_2687

Experiment: KB with Mitomycin C 0.05 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.05 ug/ml
3,261,185	+		Psyr_2686	0.12	-1.7
3,261,185	+		Psyr_2686	0.12	-2.3
3,261,186	-		Psyr_2686	0.12	+0.0
3,261,233	+		Psyr_2686	0.17	-3.1
3,261,233	+		Psyr_2686	0.17	+3.6
3,261,234	-		Psyr_2686	0.17	-3.1
3,261,234	-		Psyr_2686	0.17	+3.2
3,261,263	-		Psyr_2686	0.20	-0.7
3,261,263	-		Psyr_2686	0.20	-0.3
3,261,293	+		Psyr_2686	0.24	+0.1
3,261,325	+		Psyr_2686	0.27	+2.0
3,261,325	+		Psyr_2686	0.27	+3.1
3,261,326	-		Psyr_2686	0.27	-0.1
3,261,326	-		Psyr_2686	0.27	-1.4
3,261,327	+		Psyr_2686	0.27	-1.2
3,261,327	+		Psyr_2686	0.27	-1.3
3,261,327	+		Psyr_2686	0.27	-0.9
3,261,328	-		Psyr_2686	0.27	+2.0
3,261,328	-		Psyr_2686	0.27	+1.4
3,261,328	-		Psyr_2686	0.27	-2.6
3,261,328	-		Psyr_2686	0.27	-0.1
3,261,454	+		Psyr_2686	0.41	-0.8
3,261,454	+		Psyr_2686	0.41	-0.6
3,261,454	+		Psyr_2686	0.41	-0.5
3,261,454	+		Psyr_2686	0.41	+0.4
3,261,454	+		Psyr_2686	0.41	-2.0
3,261,454	+		Psyr_2686	0.41	-1.4
3,261,455	-		Psyr_2686	0.41	-1.1
3,261,455	-		Psyr_2686	0.41	-1.1
3,261,455	-		Psyr_2686	0.41	+0.1
3,261,519	+		Psyr_2686	0.48	+2.7
3,261,519	+		Psyr_2686	0.48	-3.4
3,261,519	+		Psyr_2686	0.48	+0.1
3,261,520	-		Psyr_2686	0.48	+5.3
3,261,644	-		Psyr_2686	0.61	+2.0
3,261,644	-		Psyr_2686	0.61	+0.6
3,261,644	-		Psyr_2686	0.61	-1.5
3,261,766	+		Psyr_2686	0.75	+0.4
3,262,016	+				-2.0
3,262,016	+				-1.5
3,262,016	+				-1.0
3,262,016	+				+0.4
3,262,017	-				-0.2
3,262,017	-				+0.4
3,262,017	-				+2.7
3,262,017	-				+0.4
3,262,017	-				-1.3
3,262,017	-				-0.8
3,262,020	+				+3.0
3,262,021	-				-1.9
3,262,147	-				-3.6
3,262,236	-				-0.7
3,262,381	-		Psyr_2687	0.17	-2.9
3,262,381	-		Psyr_2687	0.17	+2.0
3,262,381	-		Psyr_2687	0.17	+0.5
3,262,381	-		Psyr_2687	0.17	+2.4
3,262,506	+		Psyr_2687	0.26	+1.6
3,262,592	+		Psyr_2687	0.32	+3.0
3,262,592	+		Psyr_2687	0.32	+2.0
3,262,592	+		Psyr_2687	0.32	+2.7
3,262,592	+		Psyr_2687	0.32	-1.3
3,262,593	-		Psyr_2687	0.32	-1.3
3,262,593	-		Psyr_2687	0.32	-1.0
3,262,660	+		Psyr_2687	0.37	+2.7
3,262,661	-		Psyr_2687	0.37	+2.7
3,262,744	+		Psyr_2687	0.43	-1.0
3,262,744	+		Psyr_2687	0.43	+1.3
3,262,744	+		Psyr_2687	0.43	-2.4
3,262,744	+		Psyr_2687	0.43	-3.2
3,262,745	-		Psyr_2687	0.43	-1.0
3,262,745	-		Psyr_2687	0.43	+1.0
3,262,745	-		Psyr_2687	0.43	-0.2
3,262,745	-		Psyr_2687	0.43	-1.5
3,262,745	-		Psyr_2687	0.43	+1.5
3,262,745	-		Psyr_2687	0.43	-0.3
3,262,745	-		Psyr_2687	0.43	-2.4
3,262,745	-		Psyr_2687	0.43	+0.9
3,262,769	-		Psyr_2687	0.45	+3.6
3,262,769	-		Psyr_2687	0.45	+1.2
3,262,774	+		Psyr_2687	0.45	+0.5
3,262,774	+		Psyr_2687	0.45	+3.2
3,262,775	-		Psyr_2687	0.45	-1.9
3,262,839	+		Psyr_2687	0.50	+3.2
3,262,839	+		Psyr_2687	0.50	+0.7
3,262,839	+		Psyr_2687	0.50	+2.0
3,262,839	+		Psyr_2687	0.50	+0.8
3,262,851	-		Psyr_2687	0.51	-0.5
3,262,851	-		Psyr_2687	0.51	+3.7
3,263,055	+		Psyr_2687	0.65	+3.2
3,263,056	-		Psyr_2687	0.65	+0.3
3,263,056	-		Psyr_2687	0.65	+1.0
3,263,056	-		Psyr_2687	0.65	+1.5
3,263,124	-		Psyr_2687	0.70	-3.1
3,263,140	-		Psyr_2687	0.71	-2.8
3,263,406	+				-1.9
3,263,407	-				+0.6
3,263,539	+				+1.7
3,263,540	-				-0.1
3,263,555	+				-0.4
3,263,555	+				-0.4
3,263,555	+				-0.6
3,263,555	+				-1.3
3,263,555	+				-0.4
3,263,555	+				+0.4
3,263,556	-				+2.0
3,263,556	-				+0.6
3,263,556	-				+2.6
3,263,556	-				-1.3
3,263,556	-				+2.0
3,263,556	-				+0.8
3,263,681	-				+2.7
3,263,682	+				-0.4
3,263,682	+				+0.4
3,263,682	+				-0.2
3,263,683	-				-3.2
3,263,683	-				-0.5
3,263,683	-				+0.6
3,263,683	-				+0.4
3,263,896	+		Psyr_2688	0.60	+1.4
3,263,896	+		Psyr_2688	0.60	-0.0
3,263,896	+		Psyr_2688	0.60	+0.4
3,263,896	+		Psyr_2688	0.60	-0.8
3,263,896	+		Psyr_2688	0.60	-0.3
3,263,897	-		Psyr_2688	0.61	+0.2
3,263,897	-		Psyr_2688	0.61	-3.1
3,263,897	-		Psyr_2688	0.61	+0.2
3,264,012	+		Psyr_2688	0.89	-0.2
3,264,013	-		Psyr_2688	0.89	-1.8
3,264,013	-		Psyr_2688	0.89	-0.6
3,264,070	+				+0.0
3,264,089	+				-4.3
3,264,090	-				-1.1
3,264,090	-				+1.4
3,264,115	+				-1.8
3,264,222	-				+0.8
3,264,323	+				+3.0
3,264,324	-				-1.6
3,264,326	-				-1.1
3,264,326	-				-2.9
3,264,326	-				+0.6
3,264,326	-				-2.6
3,264,326	-				-0.3
3,264,332	+				+3.2
3,264,333	-				-2.6
3,264,389	+				-0.0
3,264,390	-				-2.9
3,264,486	-				+0.4
3,264,487	+				-2.4
3,264,489	+				-5.4
3,264,489	+				+0.4
3,264,489	+				+0.2
3,264,490	-				-1.2
3,264,490	-				-0.7
3,264,490	-				-0.5
3,264,490	-				+0.1
3,264,491	+				-4.0
3,264,491	+				-1.6
3,264,492	-				+4.1
3,264,492	-				+1.6
3,264,494	-				-1.5
3,264,494	-				-1.2
3,264,494	-				+3.2