Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_2179

Experiment: KB with Mitomycin C 0.05 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.05 ug/ml
2,531,432	+		Psyr_2178	0.53	-0.2
2,531,497	+		Psyr_2178	0.65	+0.9
2,531,554	+		Psyr_2178	0.75	+2.8
2,531,554	+		Psyr_2178	0.75	+0.7
2,531,790	+				-1.3
2,531,793	-				-1.3
2,531,883	-				+0.5
2,531,905	-				-1.1
2,531,931	-				+0.2
2,531,945	+				-0.1
2,531,946	-				+0.3
2,531,946	-				+0.9
2,532,154	+				+1.4
2,532,154	+				-0.7
2,532,154	+				+2.3
2,532,154	+				+5.5
2,532,154	+				+0.2
2,532,154	+				+3.8
2,532,154	+				+3.6
2,532,155	-				+1.5
2,532,228	+				-0.1
2,532,318	+				-1.3
2,532,318	+				-1.2
2,532,319	-				-0.7
2,532,319	-				-1.5
2,532,319	-				-0.4
2,532,319	-				+3.8
2,532,319	-				+5.2
2,532,375	-				+0.9
2,532,387	+		Psyr_2179	0.11	+3.1
2,532,399	+		Psyr_2179	0.11	+0.9
2,532,439	-		Psyr_2179	0.14	-1.5
2,532,439	-		Psyr_2179	0.14	-2.4
2,532,503	+		Psyr_2179	0.19	+3.6
2,532,582	-		Psyr_2179	0.25	-0.2
2,532,627	+		Psyr_2179	0.28	-2.7
2,532,648	-		Psyr_2179	0.29	+1.2
2,532,676	+		Psyr_2179	0.32	-0.4
2,532,676	+		Psyr_2179	0.32	+2.8
2,532,676	+		Psyr_2179	0.32	-0.5
2,532,676	+		Psyr_2179	0.32	-1.7
2,532,677	-		Psyr_2179	0.32	-0.7
2,532,677	-		Psyr_2179	0.32	+0.9
2,532,677	-		Psyr_2179	0.32	-0.0
2,532,781	+		Psyr_2179	0.39	+2.4
2,532,781	+		Psyr_2179	0.39	+0.2
2,532,816	+		Psyr_2179	0.42	+0.8
2,532,816	+		Psyr_2179	0.42	+0.2
2,532,816	+		Psyr_2179	0.42	-1.6
2,532,816	+		Psyr_2179	0.42	+2.8
2,532,817	-		Psyr_2179	0.42	-0.7
2,532,817	-		Psyr_2179	0.42	+3.1
2,532,817	-		Psyr_2179	0.42	+1.1
2,532,817	-		Psyr_2179	0.42	-0.1
2,532,817	-		Psyr_2179	0.42	+2.2
2,532,831	+		Psyr_2179	0.43	-2.9
2,532,832	-		Psyr_2179	0.43	+3.0
2,532,837	+		Psyr_2179	0.43	-4.9
2,532,838	-		Psyr_2179	0.43	+0.6
2,532,857	-		Psyr_2179	0.45	+1.8
2,532,972	+		Psyr_2179	0.53	-3.9
2,532,972	+		Psyr_2179	0.53	-2.2
2,532,973	-		Psyr_2179	0.53	+0.3
2,532,981	-		Psyr_2179	0.54	-0.2
2,532,985	+		Psyr_2179	0.54	-0.9
2,532,986	-		Psyr_2179	0.54	-1.5
2,532,986	-		Psyr_2179	0.54	-0.9
2,532,991	+		Psyr_2179	0.54	+0.2
2,533,064	+		Psyr_2179	0.60	-3.9
2,533,064	+		Psyr_2179	0.60	-2.5
2,533,064	+		Psyr_2179	0.60	+4.5
2,533,064	+		Psyr_2179	0.60	+4.6
2,533,064	+		Psyr_2179	0.60	+0.6
2,533,113	+		Psyr_2179	0.63	-2.2
2,533,113	+		Psyr_2179	0.63	-0.8
2,533,167	+		Psyr_2179	0.67	-1.5
2,533,167	+		Psyr_2179	0.67	+1.7
2,533,167	+		Psyr_2179	0.67	+2.2
2,533,167	+		Psyr_2179	0.67	-2.2
2,533,167	+		Psyr_2179	0.67	-0.7
2,533,167	+		Psyr_2179	0.67	+0.8
2,533,167	+		Psyr_2179	0.67	-3.2
2,533,167	+		Psyr_2179	0.67	+3.6
2,533,168	-		Psyr_2179	0.67	-2.5
2,533,168	-		Psyr_2179	0.67	+3.4
2,533,168	-		Psyr_2179	0.67	-1.5
2,533,168	-		Psyr_2179	0.67	+0.1
2,533,168	-		Psyr_2179	0.67	-2.5
2,533,168	-		Psyr_2179	0.67	-0.6
2,533,168	-		Psyr_2179	0.67	-2.4
2,533,168	-		Psyr_2179	0.67	-1.2
2,533,263	+		Psyr_2179	0.74	+2.4
2,533,263	+		Psyr_2179	0.74	+4.0
2,533,264	-		Psyr_2179	0.74	-1.6
2,533,264	-		Psyr_2179	0.74	+0.8
2,533,264	-		Psyr_2179	0.74	+2.4
2,533,318	+		Psyr_2179	0.78	+2.4
2,533,319	-		Psyr_2179	0.78	-2.4
2,533,470	+		Psyr_2179	0.89	+2.4
2,533,471	-		Psyr_2179	0.89	-1.2
2,533,471	-		Psyr_2179	0.89	-1.2
2,533,471	-		Psyr_2179	0.89	+0.6
2,533,471	-		Psyr_2179	0.89	-1.5
2,533,471	-		Psyr_2179	0.89	-0.0
2,533,482	+				+0.9
2,533,483	-				+0.3
2,533,488	+				-2.2
2,533,683	+				+1.0
2,533,758	+				+0.8
2,533,758	+				+4.9
2,533,758	+				-1.9
2,533,758	+				+1.2
2,533,758	+				-2.9
2,533,758	+				+0.8
2,533,758	+				+0.2
2,533,758	+				-1.2
2,533,758	+				-3.1
2,533,758	+				+0.8
2,533,759	-				-1.1
2,533,759	-				-1.5
2,533,759	-				+6.1
2,533,759	-				-2.8
2,533,759	-				+0.1
2,533,760	+				-0.9
2,533,760	+				+0.8
2,533,760	+				-0.5
2,533,760	+				-3.0
2,533,760	+				+2.8
2,533,760	+				+0.6
2,533,787	+				+0.5
2,533,787	+				+1.8
2,533,787	+				+0.5
2,533,787	+				-2.4
2,533,788	-				+0.8
2,533,788	-				+0.4
2,533,789	+				+0.8
2,533,820	-				-0.9
2,533,823	-				+0.8
2,533,823	-				+2.8
2,533,850	+				-1.7
2,533,850	+				-2.7
2,533,851	-				-0.9
2,533,851	-				+0.1
2,533,918	+				-0.7
2,533,921	+				+0.8
2,533,921	+				-3.8
2,533,922	-				-3.2
2,533,939	+				+2.4
2,533,939	+				-1.5
2,533,947	-				-1.1
2,533,947	-				-2.5
2,533,962	-				-3.6
2,534,015	+				+1.0
2,534,058	+				+0.3
2,534,067	+				-1.0
2,534,075	+				-1.5
2,534,076	-				+0.8
2,534,078	+				-1.5
2,534,078	+				+3.4
2,534,078	+				-0.9
2,534,078	+				+1.7
2,534,078	+				+0.1
2,534,079	-				-1.3
2,534,168	-				-1.2
2,534,259	+		Psyr_2180	0.15	-0.3
2,534,260	-		Psyr_2180	0.15	-2.4
2,534,260	-		Psyr_2180	0.15	-3.1
2,534,260	-		Psyr_2180	0.15	-2.5
2,534,260	-		Psyr_2180	0.15	-2.0
2,534,260	-		Psyr_2180	0.15	+1.2