Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_0790

Experiment: KB with Mitomycin C 0.05 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.05 ug/ml
896,626	+				+0.5
896,631	+				-2.5
896,631	+				+2.8
896,631	+				-2.0
896,631	+				+0.7
896,632	-				-0.2
896,632	-				-1.1
896,632	-				+0.8
896,632	-				+0.8
896,677	+				+0.8
896,678	-				+3.8
896,678	-				-1.8
896,678	-				+3.1
896,678	-				+1.6
896,678	-				-1.5
896,694	-				+0.5
896,932	+				-1.1
896,933	-				+0.8
896,988	-				+3.9
897,148	-				+0.8
897,165	+				-0.1
897,165	+				-4.1
897,201	+				+0.0
897,303	+				-1.8
897,304	-				-2.4
897,315	+				+1.8
897,315	+				-1.3
897,315	+				-1.9
897,315	+				+0.8
897,315	+				-1.1
897,315	+				+0.5
897,315	+				-0.5
897,315	+				-1.4
897,316	-				-3.2
897,316	-				-4.2
897,316	-				-2.0
897,316	-				+0.6
897,316	-				+0.8
897,418	-		Psyr_0790	0.17	-0.2
897,426	+		Psyr_0790	0.17	+0.0
897,426	+		Psyr_0790	0.17	-0.7
897,426	+		Psyr_0790	0.17	-0.6
897,427	-		Psyr_0790	0.17	-0.5
897,427	-		Psyr_0790	0.17	+4.2
897,427	-		Psyr_0790	0.17	+1.3
897,427	-		Psyr_0790	0.17	-2.2
897,427	-		Psyr_0790	0.17	-1.1
897,427	-		Psyr_0790	0.17	-0.6
897,433	-		Psyr_0790	0.18	-0.5
897,433	-		Psyr_0790	0.18	-1.0
897,433	-		Psyr_0790	0.18	-0.4
897,577	+		Psyr_0790	0.29	-2.4
897,577	+		Psyr_0790	0.29	-0.2
897,578	-		Psyr_0790	0.29	+0.5
897,578	-		Psyr_0790	0.29	-1.0
897,679	+		Psyr_0790	0.37	+2.4
897,679	+		Psyr_0790	0.37	+0.1
897,680	-		Psyr_0790	0.37	-0.4
897,680	-		Psyr_0790	0.37	-1.0
897,680	-		Psyr_0790	0.37	-1.7
897,680	-		Psyr_0790	0.37	-1.5
897,991	+		Psyr_0790	0.61	+2.2
898,036	-		Psyr_0790	0.64	-1.4
898,036	-		Psyr_0790	0.64	-1.7
898,164	+		Psyr_0790	0.74	-2.1
898,165	-		Psyr_0790	0.74	-1.3
898,305	+		Psyr_0790	0.85	-4.5
898,305	+		Psyr_0790	0.85	+0.8
898,305	+		Psyr_0790	0.85	-1.0
898,305	+		Psyr_0790	0.85	-2.2
898,305	+		Psyr_0790	0.85	-3.2
898,306	-		Psyr_0790	0.85	+1.8
898,306	-		Psyr_0790	0.85	-3.9
898,306	-		Psyr_0790	0.85	-3.7
898,306	-		Psyr_0790	0.85	-0.9
898,323	+		Psyr_0790	0.86	-2.0
898,324	-		Psyr_0790	0.87	+0.8
898,324	-		Psyr_0790	0.87	+4.4
898,373	-				-2.0
898,373	-				-2.4
898,373	-				+1.0
898,373	-				+0.0
898,486	+				-0.5
898,486	+				+3.9
898,487	-				-0.2
898,499	-				-1.6
898,518	+				-0.7
898,566	-				-0.3
898,584	-				-0.4
898,655	+				-0.8
898,656	-				-3.1
898,656	-				-4.5
898,705	-				-1.1
898,805	+		Psyr_0791	0.17	+1.1
898,805	+		Psyr_0791	0.17	+0.8
899,248	+				-1.6
899,249	-				-0.8
899,293	-				-0.0
899,385	-		Psyr_0792	0.22	+3.4