Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4537

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
5,423,795	+		Echvi_4536	0.11	+0.1
5,423,796	-		Echvi_4536	0.11	-1.9
5,423,800	-		Echvi_4536	0.11	+1.0
5,423,844	+		Echvi_4536	0.15	+0.4
5,423,910	-		Echvi_4536	0.21	-1.8
5,423,910	-		Echvi_4536	0.21	+0.8
5,423,923	-		Echvi_4536	0.23	+2.8
5,423,974	+		Echvi_4536	0.27	+0.7
5,423,975	-		Echvi_4536	0.27	-1.9
5,424,072	+		Echvi_4536	0.36	-0.6
5,424,076	+		Echvi_4536	0.37	+0.4
5,424,076	+		Echvi_4536	0.37	+0.1
5,424,076	+		Echvi_4536	0.37	+2.3
5,424,077	-		Echvi_4536	0.37	+0.6
5,424,077	-		Echvi_4536	0.37	+0.4
5,424,077	-		Echvi_4536	0.37	-0.0
5,424,191	+		Echvi_4536	0.47	-0.6
5,424,191	+		Echvi_4536	0.47	+0.9
5,424,191	+		Echvi_4536	0.47	+1.5
5,424,191	+		Echvi_4536	0.47	+0.4
5,424,191	+		Echvi_4536	0.47	+1.1
5,424,191	+		Echvi_4536	0.47	-0.1
5,424,192	-		Echvi_4536	0.47	+0.9
5,424,192	-		Echvi_4536	0.47	+2.0
5,424,192	-		Echvi_4536	0.47	-1.0
5,424,234	-		Echvi_4536	0.51	-1.6
5,424,234	-		Echvi_4536	0.51	+0.4
5,424,234	-		Echvi_4536	0.51	-0.3
5,424,245	+		Echvi_4536	0.52	+0.1
5,424,356	+		Echvi_4536	0.62	+0.3
5,424,356	+		Echvi_4536	0.62	+1.2
5,424,357	-		Echvi_4536	0.63	-1.0
5,424,362	+		Echvi_4536	0.63	+1.7
5,424,362	+		Echvi_4536	0.63	-0.2
5,424,363	-		Echvi_4536	0.63	+1.0
5,424,366	-		Echvi_4536	0.63	-0.4
5,424,395	+		Echvi_4536	0.66	+0.0
5,424,399	-		Echvi_4536	0.66	+0.3
5,424,435	+		Echvi_4536	0.70	+1.4
5,424,482	+		Echvi_4536	0.74	+1.5
5,424,484	+		Echvi_4536	0.74	-0.7
5,424,507	-		Echvi_4536	0.76	+2.3
5,424,509	-		Echvi_4536	0.77	-0.5
5,424,509	-		Echvi_4536	0.77	-2.7
5,424,546	+		Echvi_4536	0.80	+1.2
5,424,547	-		Echvi_4536	0.80	+0.9
5,424,783	-				-0.5
5,424,997	-				-0.8
5,425,023	+				-1.4
5,425,187	+		Echvi_4537	0.15	+2.4
5,425,249	+		Echvi_4537	0.17	-1.3
5,425,269	-		Echvi_4537	0.17	-0.3
5,425,330	+		Echvi_4537	0.20	-0.3
5,425,555	+		Echvi_4537	0.28	-0.2
5,425,556	-		Echvi_4537	0.28	-0.8
5,425,572	-		Echvi_4537	0.28	+0.2
5,425,644	+		Echvi_4537	0.31	-0.2
5,425,644	+		Echvi_4537	0.31	+0.7
5,425,644	+		Echvi_4537	0.31	+1.8
5,425,647	-		Echvi_4537	0.31	-0.1
5,425,689	+		Echvi_4537	0.33	-0.7
5,425,689	+		Echvi_4537	0.33	-1.2
5,425,690	-		Echvi_4537	0.33	-0.7
5,425,737	+		Echvi_4537	0.34	+0.5
5,425,783	-		Echvi_4537	0.36	-0.4
5,425,824	+		Echvi_4537	0.37	-0.4
5,425,824	+		Echvi_4537	0.37	+0.0
5,425,824	+		Echvi_4537	0.37	+0.0
5,425,825	-		Echvi_4537	0.38	-2.0
5,425,825	-		Echvi_4537	0.38	+0.8
5,425,886	-		Echvi_4537	0.40	-0.8
5,425,924	+		Echvi_4537	0.41	-0.8
5,425,953	+		Echvi_4537	0.42	-0.5
5,425,953	+		Echvi_4537	0.42	-1.8
5,426,086	-		Echvi_4537	0.47	-0.8
5,426,121	+		Echvi_4537	0.48	-1.6
5,426,122	-		Echvi_4537	0.48	-1.7
5,426,185	-		Echvi_4537	0.50	+0.8
5,426,254	-		Echvi_4537	0.53	+1.3
5,426,302	-		Echvi_4537	0.55	+0.0
5,426,302	-		Echvi_4537	0.55	-1.0
5,426,320	+		Echvi_4537	0.55	+1.4
5,426,320	+		Echvi_4537	0.55	-1.2
5,426,321	-		Echvi_4537	0.55	-0.6
5,426,321	-		Echvi_4537	0.55	+0.1
5,426,345	+		Echvi_4537	0.56	-1.5
5,426,349	+		Echvi_4537	0.56	+1.4
5,426,350	-		Echvi_4537	0.56	+0.7
5,426,430	+		Echvi_4537	0.59	+0.0
5,426,430	+		Echvi_4537	0.59	+0.8
5,426,555	-		Echvi_4537	0.64	-0.1
5,426,675	+		Echvi_4537	0.68	-0.7
5,426,675	+		Echvi_4537	0.68	-2.0
5,426,676	-		Echvi_4537	0.68	-1.1
5,426,676	-		Echvi_4537	0.68	+0.9
5,426,703	+		Echvi_4537	0.69	-1.1
5,426,703	+		Echvi_4537	0.69	-1.8
5,426,704	-		Echvi_4537	0.69	-1.4
5,426,704	-		Echvi_4537	0.69	-1.8
5,426,704	-		Echvi_4537	0.69	-0.5
5,426,751	+		Echvi_4537	0.71	-0.7
5,426,848	-		Echvi_4537	0.74	-0.2
5,426,848	-		Echvi_4537	0.74	+0.4
5,426,848	-		Echvi_4537	0.74	-0.1
5,426,850	+		Echvi_4537	0.74	+0.5
5,426,851	-		Echvi_4537	0.74	+0.7
5,426,851	-		Echvi_4537	0.74	+1.1
5,426,851	-		Echvi_4537	0.74	+0.0
5,426,875	-		Echvi_4537	0.75	-1.2
5,427,000	+		Echvi_4537	0.80	-4.3
5,427,024	+		Echvi_4537	0.81	-1.7
5,427,045	+		Echvi_4537	0.81	+0.8
5,427,046	-		Echvi_4537	0.81	-0.1
5,427,166	-		Echvi_4537	0.86	-0.5
5,427,166	-		Echvi_4537	0.86	+0.5
5,427,174	+		Echvi_4537	0.86	-0.6
5,427,174	+		Echvi_4537	0.86	-0.4
5,427,175	-		Echvi_4537	0.86	-0.1
5,427,277	-		Echvi_4537	0.90	-1.6
5,427,277	-		Echvi_4537	0.90	-0.6
5,427,316	-				-1.0
5,427,366	+				-0.4
5,427,367	-				+1.6
5,427,367	-				-0.4
5,427,406	-				-0.1
5,427,472	-				+0.6
5,427,472	-				+0.2
5,427,474	+				-0.2
5,427,511	-				-0.8
5,427,594	+				-1.0
5,427,594	+				-1.3
5,427,594	+				-0.6
5,427,595	-				-0.4
5,427,595	-				-1.0
5,427,595	-				-0.3
5,427,597	-				+0.1
5,427,630	-				-0.8
5,427,630	-				-1.1
5,427,634	+				+0.2
5,427,634	+				+0.2
5,427,635	-				+0.0
5,427,681	-				-0.3
5,427,689	+				+0.1
5,427,697	+				+0.4
5,427,711	+				-0.1
5,427,712	-				-1.3
5,427,720	-				+0.2
5,428,147	+		Echvi_4538	0.46	-0.6
5,428,148	-		Echvi_4538	0.46	-1.6
5,428,172	-		Echvi_4538	0.48	-0.3
5,428,186	+		Echvi_4538	0.50	-0.2
5,428,187	-		Echvi_4538	0.50	-1.1
5,428,192	+		Echvi_4538	0.50	+0.0
5,428,356	+		Echvi_4538	0.66	-0.0
5,428,431	+		Echvi_4538	0.74	-0.3
5,428,431	+		Echvi_4538	0.74	-0.3
5,428,431	+		Echvi_4538	0.74	-2.6