Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4254

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
5,101,155	+				+1.2
5,101,163	+				+0.2
5,101,163	+				+0.3
5,101,164	-				+1.3
5,101,164	-				+0.3
5,101,167	+				-0.6
5,101,168	-				-1.2
5,101,168	-				+0.5
5,101,168	-				-0.6
5,101,179	+				-0.0
5,101,246	+		Echvi_4253	0.12	+1.6
5,101,246	+		Echvi_4253	0.12	+0.6
5,101,246	+		Echvi_4253	0.12	-0.5
5,101,247	-		Echvi_4253	0.12	-0.8
5,101,247	-		Echvi_4253	0.12	-1.5
5,101,247	-		Echvi_4253	0.12	-0.5
5,101,247	-		Echvi_4253	0.12	+0.1
5,101,247	-		Echvi_4253	0.12	+0.9
5,101,249	-		Echvi_4253	0.12	+0.1
5,101,305	-		Echvi_4253	0.18	-2.4
5,101,305	-		Echvi_4253	0.18	-2.9
5,101,342	+		Echvi_4253	0.23	+0.4
5,101,512	+		Echvi_4253	0.42	+0.4
5,101,512	+		Echvi_4253	0.42	-0.6
5,101,513	-		Echvi_4253	0.42	-1.6
5,101,513	-		Echvi_4253	0.42	+0.4
5,101,513	-		Echvi_4253	0.42	-0.1
5,101,513	-		Echvi_4253	0.42	-0.4
5,101,613	+		Echvi_4253	0.53	-0.4
5,101,614	-		Echvi_4253	0.54	+1.6
5,101,619	+		Echvi_4253	0.54	-0.8
5,101,619	+		Echvi_4253	0.54	-1.7
5,101,620	-		Echvi_4253	0.54	-0.1
5,101,620	-		Echvi_4253	0.54	+1.4
5,101,620	-		Echvi_4253	0.54	+0.3
5,101,620	-		Echvi_4253	0.54	-2.1
5,101,622	+		Echvi_4253	0.54	+0.4
5,101,622	+		Echvi_4253	0.54	+0.0
5,101,654	+		Echvi_4253	0.58	-0.0
5,101,655	-		Echvi_4253	0.58	+0.9
5,101,675	-		Echvi_4253	0.60	-0.2
5,101,722	+		Echvi_4253	0.66	-0.8
5,101,723	-		Echvi_4253	0.66	+0.7
5,101,777	+		Echvi_4253	0.72	+0.6
5,101,801	-		Echvi_4253	0.75	-0.3
5,101,839	+		Echvi_4253	0.79	-1.7
5,101,949	-				-0.4
5,101,988	+				-0.8
5,101,988	+				+0.7
5,101,989	-				+1.8
5,101,989	-				+0.8
5,101,989	-				-0.6
5,102,029	+				+0.5
5,102,030	-				-1.5
5,102,030	-				-2.1
5,102,032	+				-1.3
5,102,039	-				+1.8
5,102,044	-				-0.6
5,102,044	-				+0.6
5,102,046	+				+0.2
5,102,046	+				+0.8
5,102,046	+				+3.0
5,102,058	+				+0.6
5,102,143	-				-1.3
5,102,191	+		Echvi_4254	0.12	+0.2
5,102,191	+		Echvi_4254	0.12	-0.2
5,102,192	-		Echvi_4254	0.12	-0.1
5,102,226	+		Echvi_4254	0.15	+0.1
5,102,226	+		Echvi_4254	0.15	-0.3
5,102,226	+		Echvi_4254	0.15	+1.0
5,102,226	+		Echvi_4254	0.15	+3.2
5,102,226	+		Echvi_4254	0.15	+1.7
5,102,231	-		Echvi_4254	0.15	-0.4
5,102,248	+		Echvi_4254	0.17	-0.0
5,102,368	+		Echvi_4254	0.27	+0.4
5,102,369	-		Echvi_4254	0.27	-1.4
5,102,370	+		Echvi_4254	0.28	-0.3
5,102,370	+		Echvi_4254	0.28	-1.2
5,102,371	-		Echvi_4254	0.28	+1.2
5,102,371	-		Echvi_4254	0.28	+1.6
5,102,373	+		Echvi_4254	0.28	+0.0
5,102,374	-		Echvi_4254	0.28	+0.3
5,102,517	+		Echvi_4254	0.40	-0.0
5,102,517	+		Echvi_4254	0.40	-0.5
5,102,663	-		Echvi_4254	0.53	-0.9
5,102,699	-		Echvi_4254	0.56	-0.2
5,102,733	+		Echvi_4254	0.59	-0.8
5,102,733	+		Echvi_4254	0.59	-0.8
5,102,733	+		Echvi_4254	0.59	-1.5
5,102,770	+		Echvi_4254	0.63	+1.0
5,102,782	+		Echvi_4254	0.64	+2.6
5,102,844	+		Echvi_4254	0.69	-1.7
5,102,844	+		Echvi_4254	0.69	+0.8
5,102,844	+		Echvi_4254	0.69	-0.1
5,102,844	+		Echvi_4254	0.69	-1.1
5,102,844	+		Echvi_4254	0.69	+0.1
5,102,845	-		Echvi_4254	0.69	+0.7
5,102,845	-		Echvi_4254	0.69	+0.5
5,102,943	+		Echvi_4254	0.78	-0.2
5,102,944	-		Echvi_4254	0.78	-2.0
5,102,945	+		Echvi_4254	0.78	+0.2
5,102,945	+		Echvi_4254	0.78	+0.7
5,102,945	+		Echvi_4254	0.78	+0.4
5,103,010	+		Echvi_4254	0.84	-0.7
5,103,010	+		Echvi_4254	0.84	+0.3
5,103,010	+		Echvi_4254	0.84	+1.8
5,103,010	+		Echvi_4254	0.84	+0.7
5,103,010	+		Echvi_4254	0.84	+0.5
5,103,010	+		Echvi_4254	0.84	-2.3
5,103,010	+		Echvi_4254	0.84	-0.8
5,103,011	-		Echvi_4254	0.84	+0.7
5,103,011	-		Echvi_4254	0.84	+0.2
5,103,011	-		Echvi_4254	0.84	-0.0
5,103,028	-		Echvi_4254	0.85	+0.4
5,103,151	+				-0.6
5,103,152	-				+0.4
5,103,176	+				-1.5
5,103,177	-				-1.3
5,103,178	+				+0.6
5,103,178	+				+1.0
5,103,178	+				-1.5
5,103,178	+				+2.0
5,103,181	+				+1.3
5,103,181	+				+2.0
5,103,181	+				+0.3
5,103,182	-				-2.2
5,103,188	+				+0.5
5,103,194	+				-0.6
5,103,195	-				-2.4
5,103,195	-				-1.2
5,103,200	+				-1.6
5,103,243	+				+0.0
5,103,243	+				+0.5
5,103,265	-				+1.5
5,103,286	+				-1.2
5,103,287	-				+0.5
5,103,331	+				+0.8
5,103,610	-		Echvi_4255	0.23	-0.3
5,103,642	+		Echvi_4255	0.25	-0.6
5,103,643	-		Echvi_4255	0.25	-0.3
5,103,643	-		Echvi_4255	0.25	-0.9
5,103,718	+		Echvi_4255	0.30	-2.7
5,103,808	+		Echvi_4255	0.35	-0.4
5,103,808	+		Echvi_4255	0.35	+0.1
5,103,808	+		Echvi_4255	0.35	-0.5
5,103,808	+		Echvi_4255	0.35	-0.9
5,103,971	+		Echvi_4255	0.45	+1.0
5,103,979	-		Echvi_4255	0.45	+0.4
5,103,985	+		Echvi_4255	0.46	+1.0
5,103,985	+		Echvi_4255	0.46	-0.0
5,103,986	-		Echvi_4255	0.46	-1.0
5,103,986	-		Echvi_4255	0.46	+0.1
5,104,072	+		Echvi_4255	0.51	-0.8
5,104,072	+		Echvi_4255	0.51	+3.0
5,104,072	+		Echvi_4255	0.51	+0.9
5,104,072	+		Echvi_4255	0.51	+1.6
5,104,072	+		Echvi_4255	0.51	-1.0
5,104,073	-		Echvi_4255	0.51	-0.1
5,104,073	-		Echvi_4255	0.51	-0.3
5,104,073	-		Echvi_4255	0.51	-0.9
5,104,073	-		Echvi_4255	0.51	-0.8
5,104,073	-		Echvi_4255	0.51	+0.3
5,104,076	+		Echvi_4255	0.51	-1.0
5,104,090	+		Echvi_4255	0.52	-1.6
5,104,090	+		Echvi_4255	0.52	-0.8
5,104,114	+		Echvi_4255	0.53	-2.5
5,104,115	-		Echvi_4255	0.53	-1.0
5,104,115	-		Echvi_4255	0.53	-1.0
5,104,188	+		Echvi_4255	0.58	+0.4
5,104,189	-		Echvi_4255	0.58	+1.2