Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4138

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
4,956,326	+		Echvi_4136	0.21	-1.7
4,956,339	-		Echvi_4136	0.24	+0.6
4,956,346	+		Echvi_4136	0.26	+0.1
4,956,409	-		Echvi_4136	0.41	-2.0
4,956,431	+		Echvi_4136	0.46	+0.0
4,956,431	+		Echvi_4136	0.46	-0.7
4,956,432	-		Echvi_4136	0.46	-1.7
4,956,436	+		Echvi_4136	0.47	+0.1
4,956,436	+		Echvi_4136	0.47	-0.2
4,956,437	-		Echvi_4136	0.48	-0.3
4,956,437	-		Echvi_4136	0.48	+0.2
4,956,437	-		Echvi_4136	0.48	+0.0
4,956,444	-		Echvi_4136	0.49	+1.2
4,956,455	+		Echvi_4136	0.52	-2.7
4,956,455	+		Echvi_4136	0.52	-0.2
4,956,455	+		Echvi_4136	0.52	+0.6
4,956,456	-		Echvi_4136	0.52	-0.4
4,956,461	+		Echvi_4136	0.53	-0.8
4,956,494	+		Echvi_4136	0.61	-2.6
4,956,494	+		Echvi_4136	0.61	+0.3
4,956,495	-		Echvi_4136	0.61	-0.1
4,956,495	-		Echvi_4136	0.61	-1.5
4,956,495	-		Echvi_4136	0.61	+0.1
4,956,495	-		Echvi_4136	0.61	-0.0
4,956,579	+		Echvi_4136	0.81	-0.4
4,956,579	+		Echvi_4136	0.81	-1.4
4,956,579	+		Echvi_4136	0.81	+0.4
4,956,579	+		Echvi_4136	0.81	+0.0
4,956,579	+		Echvi_4136	0.81	-0.6
4,956,579	+		Echvi_4136	0.81	+1.0
4,956,580	-		Echvi_4136	0.82	-2.2
4,956,580	-		Echvi_4136	0.82	+1.1
4,956,580	-		Echvi_4136	0.82	-0.6
4,956,580	-		Echvi_4136	0.82	-0.1
4,956,677	-				-1.9
4,956,680	+				-0.5
4,956,745	-				-0.4
4,956,747	+				+1.5
4,956,748	-				-0.2
4,956,752	+				-1.0
4,956,765	+				+0.0
4,956,788	+				+0.4
4,956,808	-				+1.2
4,956,841	+				+2.0
4,956,887	-		Echvi_4137	0.17	+2.7
4,956,898	+		Echvi_4137	0.20	+0.8
4,956,924	+		Echvi_4137	0.25	-0.4
4,956,924	+		Echvi_4137	0.25	-1.1
4,956,961	+		Echvi_4137	0.33	-0.7
4,956,961	+		Echvi_4137	0.33	-1.3
4,957,006	+		Echvi_4137	0.42	-0.1
4,957,006	+		Echvi_4137	0.42	-0.4
4,957,035	+		Echvi_4137	0.48	-0.9
4,957,042	+		Echvi_4137	0.49	+0.9
4,957,098	-		Echvi_4137	0.61	+0.8
4,957,126	+		Echvi_4137	0.67	-2.1
4,957,126	+		Echvi_4137	0.67	-1.1
4,957,265	-				-0.8
4,957,265	-				+1.6
4,957,268	-				-0.5
4,957,269	+				+0.2
4,957,270	-				-0.0
4,957,321	+				-0.4
4,957,321	+				-0.4
4,957,321	+				+0.7
4,957,321	+				-0.6
4,957,323	+				-0.4
4,957,338	+				-2.1
4,957,338	+				+0.7
4,957,399	+		Echvi_4138	0.12	-0.3
4,957,415	+		Echvi_4138	0.14	+1.2
4,957,416	-		Echvi_4138	0.14	-2.4
4,957,564	+		Echvi_4138	0.32	+0.5
4,957,564	+		Echvi_4138	0.32	-0.7
4,957,564	+		Echvi_4138	0.32	-0.3
4,957,564	+		Echvi_4138	0.32	+0.5
4,957,565	-		Echvi_4138	0.32	-1.0
4,957,598	+		Echvi_4138	0.36	-1.4
4,957,633	+		Echvi_4138	0.41	+1.2
4,957,633	+		Echvi_4138	0.41	-1.3
4,957,633	+		Echvi_4138	0.41	-0.3
4,957,633	+		Echvi_4138	0.41	+1.6
4,957,633	+		Echvi_4138	0.41	-0.1
4,957,637	+		Echvi_4138	0.41	+0.5
4,957,638	-		Echvi_4138	0.41	-0.9
4,957,638	-		Echvi_4138	0.41	+0.6
4,957,640	+		Echvi_4138	0.42	+0.6
4,957,641	-		Echvi_4138	0.42	-0.0
4,957,641	-		Echvi_4138	0.42	-0.8
4,957,658	-		Echvi_4138	0.44	-1.7
4,957,667	+		Echvi_4138	0.45	+0.3
4,957,720	+		Echvi_4138	0.52	-0.7
4,957,721	-		Echvi_4138	0.52	-0.4
4,957,728	+		Echvi_4138	0.53	-1.1
4,957,728	+		Echvi_4138	0.53	-0.3
4,957,729	-		Echvi_4138	0.53	+1.1
4,957,756	-		Echvi_4138	0.56	+0.2
4,957,765	+		Echvi_4138	0.57	+0.1
4,957,766	-		Echvi_4138	0.57	+2.0
4,957,766	-		Echvi_4138	0.57	-1.4
4,957,768	+		Echvi_4138	0.58	-1.9
4,957,823	+		Echvi_4138	0.65	-0.2
4,957,927	+		Echvi_4138	0.78	-0.0
4,957,933	+		Echvi_4138	0.78	-0.5
4,957,963	-		Echvi_4138	0.82	+0.6
4,957,993	-		Echvi_4138	0.86	-1.0
4,958,020	-		Echvi_4138	0.89	+3.0
4,958,042	-				-0.6
4,958,117	-				-0.6
4,958,117	-				-0.4
4,958,117	-				-0.1
4,958,120	-				-1.4
4,958,121	+				-0.0
4,958,121	+				-1.7
4,958,122	-				+0.6
4,958,125	+				+0.8
4,958,125	+				+1.9
4,958,126	-				+0.4
4,958,128	+				-0.4
4,958,189	+				-2.0
4,958,201	-		Echvi_4139	0.12	+0.4
4,958,209	+		Echvi_4139	0.14	+0.6
4,958,210	-		Echvi_4139	0.14	+1.0
4,958,210	-		Echvi_4139	0.14	-0.0
4,958,214	-		Echvi_4139	0.15	-1.6
4,958,244	+		Echvi_4139	0.23	-0.4
4,958,244	+		Echvi_4139	0.23	+0.1
4,958,245	-		Echvi_4139	0.23	-1.0
4,958,262	+		Echvi_4139	0.27	-0.0
4,958,293	+		Echvi_4139	0.35	-0.8
4,958,316	+		Echvi_4139	0.40	+3.0
4,958,316	+		Echvi_4139	0.40	-0.1
4,958,316	+		Echvi_4139	0.40	+1.4
4,958,317	-		Echvi_4139	0.41	-0.9
4,958,317	-		Echvi_4139	0.41	-1.6
4,958,324	+		Echvi_4139	0.42	-1.7
4,958,324	+		Echvi_4139	0.42	+0.7
4,958,325	-		Echvi_4139	0.43	-0.4
4,958,348	-		Echvi_4139	0.48	+0.5
4,958,353	+		Echvi_4139	0.50	+0.5
4,958,384	+		Echvi_4139	0.57	+0.2
4,958,385	-		Echvi_4139	0.58	-2.3
4,958,385	-		Echvi_4139	0.58	+0.4
4,958,385	-		Echvi_4139	0.58	-0.3
4,958,388	+		Echvi_4139	0.58	+0.4
4,958,389	-		Echvi_4139	0.59	-0.6
4,958,389	-		Echvi_4139	0.59	-1.1
4,958,389	-		Echvi_4139	0.59	-0.7
4,958,389	-		Echvi_4139	0.59	-0.4
4,958,392	+		Echvi_4139	0.59	+0.7
4,958,392	+		Echvi_4139	0.59	-0.0
4,958,392	+		Echvi_4139	0.59	-0.5
4,958,393	-		Echvi_4139	0.60	-0.7
4,958,456	-		Echvi_4139	0.75	+0.4
4,958,490	+		Echvi_4139	0.83	-3.0
4,958,490	+		Echvi_4139	0.83	-1.7
4,958,490	+		Echvi_4139	0.83	+0.4
4,958,491	-		Echvi_4139	0.84	-1.9
4,958,495	-		Echvi_4139	0.85	-1.0
4,958,515	+		Echvi_4139	0.90	+0.4
4,958,516	-				+0.2
4,958,536	+				+1.0
4,958,536	+				-0.7
4,958,537	-				-1.2
4,958,537	-				-1.2
4,958,560	+				+0.7
4,958,560	+				-0.2
4,958,560	+				-0.1
4,958,580	+				-1.2
4,958,580	+				+0.2
4,958,581	-				-0.6
4,958,583	+				-0.8
4,958,617	+				-0.0
4,958,644	+		Echvi_4140	0.16	-0.2
4,958,663	+		Echvi_4140	0.21	-0.1
4,958,664	-		Echvi_4140	0.22	-0.3
4,958,669	-		Echvi_4140	0.23	-1.1
4,958,685	-		Echvi_4140	0.28	-0.8
4,958,725	+		Echvi_4140	0.39	-1.3
4,958,725	+		Echvi_4140	0.39	-0.3
4,958,725	+		Echvi_4140	0.39	-1.6
4,958,746	+		Echvi_4140	0.45	+3.2
4,958,746	+		Echvi_4140	0.45	+1.0
4,958,747	-		Echvi_4140	0.45	+0.5
4,958,747	-		Echvi_4140	0.45	-0.5
4,958,750	-		Echvi_4140	0.46	+1.1
4,958,750	-				+3.0
4,958,750	-		Echvi_4140	0.46	-0.1
4,958,750	-		Echvi_4140	0.46	-3.2
4,958,750	-		Echvi_4140	0.46	-2.0
4,958,792	+		Echvi_4140	0.58	-0.1
4,958,812	+		Echvi_4140	0.64	-0.4
4,958,891	+		Echvi_4140	0.86	-0.4
4,958,911	+				-0.2
4,959,056	-				+0.9
4,959,088	-				+0.4
4,959,092	+				+0.5
4,959,092	+				-1.7