Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3624

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
4,302,054	+				-0.6
4,302,148	-				-0.0
4,302,154	-				+0.3
4,302,160	-				+0.1
4,302,188	-				+0.4
4,302,188	-				+0.2
4,302,201	-				-1.8
4,302,286	+				-0.8
4,302,287	-				+1.0
4,302,288	+				-0.2
4,302,288	+				-1.7
4,302,288	+				+0.8
4,302,288	+				+0.8
4,302,289	-				-0.5
4,302,322	+				+1.7
4,302,358	+		Echvi_3623	0.15	-0.7
4,302,359	-		Echvi_3623	0.15	+0.3
4,302,453	+		Echvi_3623	0.27	-0.4
4,302,454	-				+1.9
4,302,454	-		Echvi_3623	0.27	-0.0
4,302,454	-		Echvi_3623	0.27	-0.7
4,302,454	-		Echvi_3623	0.27	-1.7
4,302,454	-		Echvi_3623	0.27	+1.6
4,302,505	+		Echvi_3623	0.34	+0.3
4,302,509	+		Echvi_3623	0.34	-1.4
4,302,509	+		Echvi_3623	0.34	-1.9
4,302,509	+		Echvi_3623	0.34	-0.2
4,302,510	-		Echvi_3623	0.34	-0.0
4,302,556	+		Echvi_3623	0.40	-1.3
4,302,556	+		Echvi_3623	0.40	-2.5
4,302,634	-		Echvi_3623	0.50	-1.8
4,302,634	-		Echvi_3623	0.50	-0.7
4,302,655	+		Echvi_3623	0.53	-1.1
4,302,682	-		Echvi_3623	0.56	-2.1
4,302,690	+		Echvi_3623	0.57	-0.6
4,302,690	+		Echvi_3623	0.57	+1.0
4,302,713	+		Echvi_3623	0.60	-0.1
4,302,714	-		Echvi_3623	0.61	+0.2
4,302,724	+		Echvi_3623	0.62	+1.2
4,302,729	-		Echvi_3623	0.63	+0.6
4,302,779	+		Echvi_3623	0.69	-0.3
4,302,793	+		Echvi_3623	0.71	-1.4
4,302,793	+		Echvi_3623	0.71	-2.9
4,302,794	-		Echvi_3623	0.71	-0.6
4,302,839	+		Echvi_3623	0.77	+0.9
4,302,841	+		Echvi_3623	0.77	-0.4
4,302,842	-		Echvi_3623	0.77	-0.5
4,302,844	+		Echvi_3623	0.77	-2.2
4,302,895	-		Echvi_3623	0.84	+0.3
4,302,906	+		Echvi_3623	0.85	+0.9
4,302,906	+		Echvi_3623	0.85	-1.8
4,302,906	+		Echvi_3623	0.85	-2.2
4,302,925	+		Echvi_3623	0.88	+0.3
4,302,926	-		Echvi_3623	0.88	+0.2
4,303,024	-				-0.7
4,303,053	-				+0.9
4,303,054	+				-0.0
4,303,056	+				+0.4
4,303,056	+				-2.2
4,303,056	+				+0.6
4,303,056	+				-1.6
4,303,057	-				-1.4
4,303,057	-				-0.2
4,303,057	-				-0.6
4,303,057	-				-1.6
4,303,057	-				-1.5
4,303,057	-				-2.4
4,303,062	+				+0.1
4,303,107	+				-0.8
4,303,107	+				-0.1
4,303,107	+				-0.4
4,303,107	+				-1.7
4,303,108	-				+0.3
4,303,108	-				+0.4
4,303,108	-				-0.9
4,303,130	+				-1.6
4,303,130	+				-1.3
4,303,297	+		Echvi_3624	0.22	+0.7
4,303,297	+		Echvi_3624	0.22	-0.3
4,303,297	+		Echvi_3624	0.22	+0.5
4,303,298	-		Echvi_3624	0.22	+0.0
4,303,298	-		Echvi_3624	0.22	+0.4
4,303,317	+		Echvi_3624	0.24	+0.6
4,303,317	+		Echvi_3624	0.24	+0.8
4,303,317	+		Echvi_3624	0.24	+3.7
4,303,317	+		Echvi_3624	0.24	-1.0
4,303,317	+		Echvi_3624	0.24	-0.3
4,303,318	-		Echvi_3624	0.24	+0.2
4,303,318	-		Echvi_3624	0.24	+0.4
4,303,320	+		Echvi_3624	0.24	-0.0
4,303,320	+		Echvi_3624	0.24	+0.6
4,303,320	+		Echvi_3624	0.24	+0.2
4,303,321	-		Echvi_3624	0.24	+0.6
4,303,323	+		Echvi_3624	0.24	+0.0
4,303,323	+		Echvi_3624	0.24	-0.8
4,303,324	-		Echvi_3624	0.24	+0.2
4,303,337	-		Echvi_3624	0.26	-1.7
4,303,366	+		Echvi_3624	0.28	+0.2
4,303,400	+		Echvi_3624	0.31	+0.4
4,303,401	-		Echvi_3624	0.31	+1.7
4,303,426	+		Echvi_3624	0.33	+0.6
4,303,426	+		Echvi_3624	0.33	-0.9
4,303,426	+		Echvi_3624	0.33	+0.7
4,303,426	+		Echvi_3624	0.33	+0.5
4,303,427	-		Echvi_3624	0.33	+0.5
4,303,431	-		Echvi_3624	0.34	-2.5
4,303,460	-		Echvi_3624	0.36	-1.8
4,303,476	+		Echvi_3624	0.37	+0.1
4,303,477	-		Echvi_3624	0.37	-0.1
4,303,477	-		Echvi_3624	0.37	-1.4
4,303,481	-		Echvi_3624	0.38	-0.4
4,303,500	+		Echvi_3624	0.39	+2.0
4,303,500	+		Echvi_3624	0.39	-2.3
4,303,501	-		Echvi_3624	0.39	-0.9
4,303,507	+		Echvi_3624	0.40	+0.2
4,303,509	+		Echvi_3624	0.40	-0.4
4,303,509	+		Echvi_3624	0.40	+0.2
4,303,509	+		Echvi_3624	0.40	+1.4
4,303,510	-		Echvi_3624	0.40	+0.3
4,303,547	+		Echvi_3624	0.43	+0.3
4,303,547	+		Echvi_3624	0.43	-0.7
4,303,548	-		Echvi_3624	0.43	-0.6
4,303,552	+		Echvi_3624	0.44	-0.2
4,303,552	+		Echvi_3624	0.44	-1.6
4,303,552	+		Echvi_3624	0.44	+0.3
4,303,552	+		Echvi_3624	0.44	+1.3
4,303,553	-		Echvi_3624	0.44	+0.3
4,303,553	-		Echvi_3624	0.44	-2.1
4,303,553	-		Echvi_3624	0.44	-0.1
4,303,553	-		Echvi_3624	0.44	-0.9
4,303,558	+		Echvi_3624	0.44	-1.6
4,303,559	-		Echvi_3624	0.44	+0.4
4,303,559	-		Echvi_3624	0.44	+0.2
4,303,559	-		Echvi_3624	0.44	-0.5
4,303,559	-		Echvi_3624	0.44	+0.1
4,303,559	-		Echvi_3624	0.44	-0.1
4,303,597	+		Echvi_3624	0.48	-0.4
4,303,598	-		Echvi_3624	0.48	+1.4
4,303,621	-		Echvi_3624	0.50	-1.3
4,303,699	-		Echvi_3624	0.56	+0.4
4,303,742	+		Echvi_3624	0.60	+1.1
4,303,743	-		Echvi_3624	0.60	-0.1
4,303,757	+		Echvi_3624	0.61	+0.3
4,303,758	-		Echvi_3624	0.61	+1.5
4,303,803	+		Echvi_3624	0.65	-1.4
4,303,859	-		Echvi_3624	0.70	+0.6
4,303,866	+		Echvi_3624	0.70	+1.4
4,303,965	+		Echvi_3624	0.79	+0.1
4,303,974	+		Echvi_3624	0.80	+0.4
4,303,974	+		Echvi_3624	0.80	+1.1
4,303,974	+		Echvi_3624	0.80	+0.6
4,303,974	+		Echvi_3624	0.80	-0.6
4,303,974	+		Echvi_3624	0.80	-0.4
4,303,975	-		Echvi_3624	0.80	+0.3
4,303,975	-		Echvi_3624	0.80	+0.8
4,303,976	+		Echvi_3624	0.80	+0.6
4,303,976	+		Echvi_3624	0.80	-1.1
4,303,976	+		Echvi_3624	0.80	-0.5
4,303,976	+		Echvi_3624	0.80	-1.6
4,303,977	-		Echvi_3624	0.80	+0.4
4,303,977	-		Echvi_3624	0.80	-0.5
4,303,977	-		Echvi_3624	0.80	+0.2
4,303,977	-				+2.7
4,303,977	-		Echvi_3624	0.80	+0.2
4,303,977	-		Echvi_3624	0.80	+0.1
4,303,977	-		Echvi_3624	0.80	-0.1
4,304,054	+		Echvi_3624	0.86	-0.3
4,304,054	+		Echvi_3624	0.86	-2.3
4,304,098	+				-0.9
4,304,098	+				-2.2
4,304,181	-				+1.3
4,304,247	-				-0.2
4,304,247	-				+1.2
4,304,266	+				-1.8
4,304,268	+				-1.3
4,304,268	+				-0.4
4,304,269	-				+0.2
4,304,269	-				-3.8
4,304,310	+				-0.1
4,304,311	-				-0.7
4,304,314	-				+0.3
4,304,333	+				+1.1
4,304,386	+				-0.2
4,304,419	+				+0.5
4,304,428	+				+0.8
4,304,428	+				-2.1
4,304,429	-				+0.4
4,304,429	-				-0.5
4,304,433	+				-0.4
4,304,433	+				+0.9
4,304,434	-				+2.0
4,304,434	-				-2.2
4,304,569	+		Echvi_3625	0.14	+0.0
4,304,581	+		Echvi_3625	0.15	+0.9
4,304,581	+		Echvi_3625	0.15	-0.9
4,304,582	-		Echvi_3625	0.15	-0.6
4,304,583	+		Echvi_3625	0.15	+0.1
4,304,583	+		Echvi_3625	0.15	+0.6
4,304,583	+		Echvi_3625	0.15	-0.7
4,304,583	+		Echvi_3625	0.15	+0.6
4,304,583	+		Echvi_3625	0.15	+0.2
4,304,584	-		Echvi_3625	0.15	+0.2
4,304,584	-		Echvi_3625	0.15	+0.3
4,304,586	-		Echvi_3625	0.15	-0.4
4,304,586	-		Echvi_3625	0.15	+1.0
4,304,590	-		Echvi_3625	0.15	-0.9
4,304,590	-		Echvi_3625	0.15	+0.7
4,304,676	+		Echvi_3625	0.20	-0.9
4,304,710	-		Echvi_3625	0.22	+1.2
4,304,781	+		Echvi_3625	0.26	+0.3
4,304,781	+		Echvi_3625	0.26	+0.3
4,304,782	-		Echvi_3625	0.26	+0.4
4,304,875	+		Echvi_3625	0.32	+0.6
4,304,875	+		Echvi_3625	0.32	-3.1
4,304,875	+		Echvi_3625	0.32	-1.1
4,304,875	+		Echvi_3625	0.32	-1.4
4,304,876	-		Echvi_3625	0.32	-0.1
4,304,876	-		Echvi_3625	0.32	+1.7
4,304,881	-		Echvi_3625	0.32	-1.0
4,304,881	-		Echvi_3625	0.32	+0.3
4,304,881	-		Echvi_3625	0.32	+0.7
4,304,881	-		Echvi_3625	0.32	+2.9
4,304,926	+		Echvi_3625	0.35	+0.9
4,304,945	+		Echvi_3625	0.36	+0.3
4,305,027	+		Echvi_3625	0.41	+0.4
4,305,027	+		Echvi_3625	0.41	-0.1
4,305,028	-		Echvi_3625	0.41	+1.0
4,305,072	+		Echvi_3625	0.43	+0.6
4,305,104	-		Echvi_3625	0.45	-2.3
4,305,201	+		Echvi_3625	0.51	-0.9