Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1301

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
1,496,948	+		Echvi_1300	0.55	+0.5
1,496,949	-		Echvi_1300	0.55	+1.8
1,496,992	+		Echvi_1300	0.58	+0.1
1,496,993	-		Echvi_1300	0.58	-2.7
1,497,029	+		Echvi_1300	0.60	+0.4
1,497,029	+		Echvi_1300	0.60	-0.3
1,497,029	+		Echvi_1300	0.60	+1.4
1,497,030	-		Echvi_1300	0.60	+0.7
1,497,030	-		Echvi_1300	0.60	-2.6
1,497,030	-		Echvi_1300	0.60	+2.7
1,497,076	-		Echvi_1300	0.63	-1.7
1,497,105	+		Echvi_1300	0.65	+0.9
1,497,105	+		Echvi_1300	0.65	-0.2
1,497,211	-		Echvi_1300	0.72	-0.6
1,497,212	+		Echvi_1300	0.72	-0.5
1,497,212	+		Echvi_1300	0.72	+0.3
1,497,212	+		Echvi_1300	0.72	-0.2
1,497,212	+		Echvi_1300	0.72	-1.0
1,497,212	+		Echvi_1300	0.72	-1.4
1,497,212	+		Echvi_1300	0.72	-0.2
1,497,212	+		Echvi_1300	0.72	-0.1
1,497,213	-		Echvi_1300	0.72	-0.3
1,497,213	-		Echvi_1300	0.72	-2.7
1,497,213	-		Echvi_1300	0.72	+0.3
1,497,213	-		Echvi_1300	0.72	-0.6
1,497,282	+		Echvi_1300	0.76	-0.0
1,497,315	+		Echvi_1300	0.78	-0.7
1,497,316	-		Echvi_1300	0.78	+0.5
1,497,316	-		Echvi_1300	0.78	-0.8
1,497,433	+		Echvi_1300	0.85	-0.8
1,497,434	-		Echvi_1300	0.85	+1.0
1,497,520	+				-1.7
1,497,521	-				-0.1
1,497,521	-				-1.5
1,497,537	+				+0.3
1,497,537	+				-1.0
1,497,538	-				+0.9
1,497,538	-				-0.3
1,497,538	-				-2.6
1,497,538	-				+2.0
1,497,539	+				-0.5
1,497,540	-				-0.5
1,497,540	-				+0.6
1,497,540	-				-3.5
1,497,540	-				+0.2
1,497,658	-				-0.9
1,497,671	-				-1.9
1,497,676	-				+1.4
1,497,692	+				-1.8
1,497,692	+				-0.6
1,497,712	+				+0.8
1,497,714	+				+0.9
1,497,714	+				+3.2
1,497,720	+				-0.8
1,497,720	+				+0.1
1,497,720	+				-0.0
1,497,720	+				+2.0
1,497,720	+				-1.9
1,497,720	+				+0.9
1,497,762	+				-1.9
1,497,762	+				+1.4
1,497,763	-				-1.1
1,497,764	+				-1.5
1,497,764	+				-0.1
1,497,765	-				-0.3
1,497,765	-				-0.3
1,497,765	-				+2.6
1,497,765	-				+0.4
1,497,799	+				+0.2
1,497,799	+				+1.4
1,497,800	-				+1.1
1,497,801	+				+0.1
1,497,801	+				-0.1
1,497,801	+				-0.3
1,497,801	+				-0.8
1,497,802	-				+0.4
1,497,817	+				+1.2
1,497,818	-				-0.6
1,497,824	+				-1.1
1,497,878	+		Echvi_1301	0.17	-2.7
1,497,879	-		Echvi_1301	0.17	-1.1
1,497,908	+		Echvi_1301	0.21	-0.6
1,497,947	-		Echvi_1301	0.27	-0.8
1,497,949	-		Echvi_1301	0.27	+0.7
1,497,976	+		Echvi_1301	0.31	+0.7
1,497,976	+		Echvi_1301	0.31	+0.7
1,498,022	+		Echvi_1301	0.38	-0.1
1,498,072	+		Echvi_1301	0.45	+0.2
1,498,072	+		Echvi_1301	0.45	-1.2
1,498,073	-		Echvi_1301	0.45	-3.9
1,498,089	+		Echvi_1301	0.47	-1.6
1,498,089	+		Echvi_1301	0.47	+0.4
1,498,105	-		Echvi_1301	0.49	-0.4
1,498,153	+		Echvi_1301	0.56	-0.2
1,498,153	+		Echvi_1301	0.56	-1.1
1,498,153	+		Echvi_1301	0.56	-2.6
1,498,153	+		Echvi_1301	0.56	-0.9
1,498,154	-		Echvi_1301	0.56	-0.5
1,498,154	-		Echvi_1301	0.56	-2.1
1,498,265	-		Echvi_1301	0.72	+0.5
1,498,275	+		Echvi_1301	0.74	-0.5
1,498,276	-		Echvi_1301	0.74	+0.2
1,498,276	-		Echvi_1301	0.74	-1.9
1,498,316	-		Echvi_1301	0.80	+0.8
1,498,318	-		Echvi_1301	0.80	+2.2
1,498,360	-		Echvi_1301	0.86	+0.3
1,498,368	+		Echvi_1301	0.87	-0.5
1,498,404	+				-0.0
1,498,417	+				-1.6
1,498,418	-				-0.1
1,498,418	-				-1.7
1,498,418	-				+0.8
1,498,418	-				-0.3
1,498,418	-				-1.0
1,498,447	-				-0.1
1,498,467	+				+1.6
1,498,496	+				+0.1
1,498,496	+				-0.9
1,498,528	-		Echvi_1302	0.15	+1.5
1,498,560	+		Echvi_1302	0.24	-1.7
1,498,580	+		Echvi_1302	0.29	-2.4
1,498,622	-		Echvi_1302	0.40	-1.9
1,498,716	+		Echvi_1302	0.65	+0.8
1,498,716	+		Echvi_1302	0.65	+0.2
1,498,772	+		Echvi_1302	0.79	+1.2
1,498,773	-		Echvi_1302	0.80	+0.2
1,498,827	+				-1.2
1,498,828	-				+0.4
1,498,828	-				-0.3
1,498,852	+				+0.3
1,498,909	+				-0.4
1,498,914	+				-0.7
1,498,914	+				-0.6
1,498,915	-				-0.1
1,498,915	-				+0.5
1,498,936	-				+0.2
1,498,946	-				+0.5
1,498,971	-				+2.2
1,498,999	+				+0.4
1,498,999	+				-0.2
1,499,004	-				+0.0
1,499,007	+				+2.2
1,499,008	-				+0.1
1,499,008	-				+0.2
1,499,025	+				+0.7
1,499,026	-				-0.8
1,499,026	-				+0.4
1,499,028	+				-0.4
1,499,088	+		Echvi_1303	0.16	-1.7
1,499,122	+		Echvi_1303	0.21	+0.6
1,499,122	+		Echvi_1303	0.21	-0.6
1,499,122	+		Echvi_1303	0.21	+1.1
1,499,122	+		Echvi_1303	0.21	+1.3
1,499,123	-		Echvi_1303	0.21	-0.3
1,499,123	-		Echvi_1303	0.21	+0.3
1,499,123	-		Echvi_1303	0.21	+0.1
1,499,133	+		Echvi_1303	0.23	-0.5
1,499,150	+		Echvi_1303	0.25	-0.5
1,499,150	+		Echvi_1303	0.25	+0.2
1,499,150	+		Echvi_1303	0.25	-0.5
1,499,150	+		Echvi_1303	0.25	-0.1
1,499,150	+		Echvi_1303	0.25	-1.6
1,499,150	+		Echvi_1303	0.25	-0.3
1,499,151	-		Echvi_1303	0.26	-0.0
1,499,151	-		Echvi_1303	0.26	-0.5
1,499,151	-		Echvi_1303	0.26	-1.1
1,499,151	-		Echvi_1303	0.26	+0.2
1,499,212	-		Echvi_1303	0.35	-0.3
1,499,283	+		Echvi_1303	0.46	-1.3
1,499,283	+		Echvi_1303	0.46	+0.5
1,499,283	+		Echvi_1303	0.46	-0.7
1,499,436	+		Echvi_1303	0.70	-1.6
1,499,436	+		Echvi_1303	0.70	+0.4
1,499,436	+		Echvi_1303	0.70	+0.6
1,499,437	-		Echvi_1303	0.70	+0.3
1,499,437	-		Echvi_1303	0.70	-0.5
1,499,437	-		Echvi_1303	0.70	-1.1
1,499,437	-		Echvi_1303	0.70	+0.2