Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1275

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
1,461,964	+		Echvi_1274	0.44	+0.4
1,461,965	-		Echvi_1274	0.44	-2.3
1,461,965	-		Echvi_1274	0.44	+0.8
1,462,007	+		Echvi_1274	0.47	+1.1
1,462,007	+		Echvi_1274	0.47	+1.4
1,462,045	+		Echvi_1274	0.49	+0.8
1,462,045	+		Echvi_1274	0.49	+0.7
1,462,046	-		Echvi_1274	0.49	+1.0
1,462,069	+		Echvi_1274	0.51	+0.5
1,462,098	+		Echvi_1274	0.52	+1.0
1,462,127	-		Echvi_1274	0.54	-3.1
1,462,215	+		Echvi_1274	0.59	-1.5
1,462,390	-		Echvi_1274	0.69	-0.5
1,462,472	-		Echvi_1274	0.74	+1.2
1,462,521	+		Echvi_1274	0.77	-0.7
1,462,521	+		Echvi_1274	0.77	+0.9
1,462,522	-		Echvi_1274	0.77	-0.9
1,462,670	-		Echvi_1274	0.86	-1.0
1,462,715	+		Echvi_1274	0.88	-0.7
1,462,901	+				+0.7
1,462,902	-				+0.4
1,462,902	-				+0.5
1,462,902	-				-0.9
1,462,902	-				+1.7
1,462,918	+				-0.1
1,463,085	+				+0.7
1,463,360	+		Echvi_1275	0.27	-0.9
1,463,360	+		Echvi_1275	0.27	-2.6
1,463,360	+		Echvi_1275	0.27	-1.1
1,463,361	-		Echvi_1275	0.27	-0.1
1,463,361	-		Echvi_1275	0.27	+1.0
1,463,361	-		Echvi_1275	0.27	+1.0
1,463,370	-		Echvi_1275	0.28	-1.6
1,463,403	+		Echvi_1275	0.30	-1.1
1,463,421	+		Echvi_1275	0.31	-0.5
1,463,421	+		Echvi_1275	0.31	-0.9
1,463,564	+		Echvi_1275	0.41	+0.4
1,463,564	+		Echvi_1275	0.41	-0.6
1,463,565	-		Echvi_1275	0.41	+0.1
1,463,618	+		Echvi_1275	0.44	+2.8
1,463,619	-		Echvi_1275	0.44	-1.0
1,463,678	+		Echvi_1275	0.48	-1.8
1,463,678	+		Echvi_1275	0.48	-2.1
1,463,735	+		Echvi_1275	0.52	-0.4
1,463,736	-		Echvi_1275	0.52	+2.0
1,463,743	+		Echvi_1275	0.53	-0.9
1,463,743	+		Echvi_1275	0.53	-1.5
1,463,800	-		Echvi_1275	0.56	+0.9
1,463,951	+		Echvi_1275	0.67	-1.1
1,463,952	-		Echvi_1275	0.67	-1.2
1,463,952	-		Echvi_1275	0.67	-1.2
1,464,089	+		Echvi_1275	0.76	-0.2
1,464,090	-		Echvi_1275	0.76	-0.4
1,464,090	-		Echvi_1275	0.76	-0.1
1,464,090	-		Echvi_1275	0.76	-0.5
1,464,090	-		Echvi_1275	0.76	+0.1
1,464,126	-		Echvi_1275	0.78	-3.1
1,464,128	+		Echvi_1275	0.78	+0.1
1,464,128	+		Echvi_1275	0.78	-1.7
1,464,128	+		Echvi_1275	0.78	-0.3
1,464,128	+		Echvi_1275	0.78	-1.1
1,464,128	+		Echvi_1275	0.78	-0.2
1,464,129	-		Echvi_1275	0.78	+0.3
1,464,129	-		Echvi_1275	0.78	-0.9
1,464,129	-		Echvi_1275	0.78	+0.2
1,464,129	-		Echvi_1275	0.78	+0.9
1,464,131	+		Echvi_1275	0.79	-1.1
1,464,131	+		Echvi_1275	0.79	-2.3
1,464,131	+		Echvi_1275	0.79	+1.8
1,464,131	+		Echvi_1275	0.79	+0.5
1,464,132	-		Echvi_1275	0.79	+0.8
1,464,132	-		Echvi_1275	0.79	+1.2
1,464,158	+		Echvi_1275	0.80	+0.2
1,464,243	-		Echvi_1275	0.86	+1.1
1,464,243	-		Echvi_1275	0.86	-3.3
1,464,342	+				+0.8
1,464,343	-				-0.3
1,464,343	-				-0.9
1,464,343	-				+2.4
1,464,344	+				-0.6
1,464,344	+				+0.9
1,464,344	+				+0.9
1,464,345	-				-0.4
1,464,345	-				-0.1
1,464,408	+				+1.4
1,464,408	+				-0.3
1,464,408	+				+1.4
1,464,408	+				+0.6
1,464,409	-				-1.3
1,464,409	-				-0.9
1,464,409	-				+0.3
1,464,409	-				+0.6
1,464,410	+				-0.3
1,464,411	-				+0.5
1,464,411	-				+0.9
1,464,411	-				-1.3
1,464,421	+				-0.3
1,464,422	-				-0.1
1,464,422	-				+0.7
1,464,442	+				-1.6
1,464,464	+				-1.9
1,464,490	+				-0.5
1,464,491	-				-1.8
1,464,572	+				-0.9
1,464,573	-				+0.4
1,464,574	+				+0.8
1,464,575	-				+0.9
1,464,591	+		Echvi_1276	0.11	-1.3
1,464,622	-		Echvi_1276	0.14	-1.0
1,464,625	+		Echvi_1276	0.15	+2.2
1,464,625	+		Echvi_1276	0.15	+0.1
1,464,626	-		Echvi_1276	0.15	+0.2
1,464,652	+		Echvi_1276	0.18	-0.6
1,464,652	+		Echvi_1276	0.18	-2.1
1,464,653	-		Echvi_1276	0.18	+0.0
1,464,687	+		Echvi_1276	0.21	-0.6
1,464,688	-		Echvi_1276	0.21	+1.4
1,464,731	-		Echvi_1276	0.26	+0.2
1,464,732	+		Echvi_1276	0.26	+0.5
1,464,733	-		Echvi_1276	0.26	-0.3
1,464,742	+		Echvi_1276	0.27	-0.3
1,464,743	-		Echvi_1276	0.27	+0.0
1,464,743	-		Echvi_1276	0.27	+0.8
1,464,758	+		Echvi_1276	0.29	-0.6
1,464,870	+		Echvi_1276	0.41	+0.6
1,464,870	+		Echvi_1276	0.41	-0.6
1,464,870	+		Echvi_1276	0.41	+0.0
1,464,870	+		Echvi_1276	0.41	+0.9
1,464,871	-		Echvi_1276	0.41	+1.5
1,464,883	+		Echvi_1276	0.43	+0.9
1,464,883	+		Echvi_1276	0.43	+1.0
1,464,884	-		Echvi_1276	0.43	-0.6
1,464,884	-		Echvi_1276	0.43	-3.0
1,464,884	-		Echvi_1276	0.43	-1.5
1,464,928	+		Echvi_1276	0.47	+0.5
1,464,986	+		Echvi_1276	0.54	+0.2
1,464,986	+		Echvi_1276	0.54	+0.4
1,464,986	+		Echvi_1276	0.54	-0.1
1,464,987	-		Echvi_1276	0.54	+0.7
1,464,987	-		Echvi_1276	0.54	+0.7
1,464,987	-		Echvi_1276	0.54	-0.6
1,464,991	+		Echvi_1276	0.54	-1.9
1,464,992	-		Echvi_1276	0.54	-0.8
1,465,027	+		Echvi_1276	0.58	-1.8
1,465,027	+		Echvi_1276	0.58	-1.4
1,465,027	+		Echvi_1276	0.58	+0.2
1,465,028	-		Echvi_1276	0.58	+0.1
1,465,033	+		Echvi_1276	0.59	+1.2
1,465,033	+		Echvi_1276	0.59	+0.0
1,465,034	-		Echvi_1276	0.59	+1.0
1,465,069	+		Echvi_1276	0.63	-0.6
1,465,070	-		Echvi_1276	0.63	+0.7
1,465,072	+		Echvi_1276	0.63	-0.4
1,465,072	+		Echvi_1276	0.63	+3.0
1,465,131	-		Echvi_1276	0.69	+0.3
1,465,405	-				+0.4
1,465,405	-				-1.2
1,465,442	+				+0.4