Experiment: m.b. Spectinomycin 0.08 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00725 and CA264_00730 are separated by 2 nucleotides CA264_00730 and CA264_00735 are separated by 153 nucleotides CA264_00735 and CA264_00740 are separated by 59 nucleotides
CA264_00725: CA264_00725 - pyruvate kinase, at 156,587 to 158,014
_00725
CA264_00730: CA264_00730 - hypothetical protein, at 158,017 to 158,445
_00730
CA264_00735: CA264_00735 - acyl carrier protein, at 158,599 to 158,835
_00735
CA264_00740: CA264_00740 - beta-ketoacyl-[acyl-carrier-protein] synthase II, at 158,895 to 160,148
_00740
Position (kb) 158
159 Strain fitness (log2 ratio) -1
0
1
2 at 157.659 kb on - strand, within CA264_00725 at 157.748 kb on + strand, within CA264_00725 at 157.752 kb on - strand, within CA264_00725 at 157.920 kb on - strand at 157.973 kb on + strand at 158.014 kb on + strand at 158.015 kb on - strand at 158.018 kb on + strand at 158.019 kb on - strand at 158.037 kb on + strand at 158.068 kb on + strand, within CA264_00730 at 158.156 kb on + strand, within CA264_00730 at 158.170 kb on + strand, within CA264_00730 at 158.256 kb on + strand, within CA264_00730 at 158.256 kb on + strand, within CA264_00730 at 158.258 kb on + strand, within CA264_00730 at 158.264 kb on + strand, within CA264_00730 at 158.264 kb on + strand, within CA264_00730 at 158.417 kb on + strand at 158.417 kb on + strand at 158.463 kb on + strand at 158.468 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Spectinomycin 0.08 mg/ml remove 157,659 - CA264_00725 0.75 -0.1 157,748 + CA264_00725 0.81 +1.2 157,752 - CA264_00725 0.82 -0.9 157,920 - -0.7 157,973 + +0.9 158,014 + +0.4 158,015 - -0.5 158,018 + +0.3 158,019 - -0.7 158,037 + +0.5 158,068 + CA264_00730 0.12 +0.9 158,156 + CA264_00730 0.32 +1.7 158,170 + CA264_00730 0.36 -0.1 158,256 + CA264_00730 0.56 +1.2 158,256 + CA264_00730 0.56 -0.6 158,258 + CA264_00730 0.56 +0.3 158,264 + CA264_00730 0.58 +0.1 158,264 + CA264_00730 0.58 +2.0 158,417 + +0.9 158,417 + +0.6 158,463 + +0.4 158,468 + +0.2
Or see this region's nucleotide sequence