Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4338

Experiment: L-Rhamnose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Rhamnose (C)
5,185,861	+		Echvi_4337	0.55	-1.3
5,185,861	+		Echvi_4337	0.55	-0.3
5,185,862	-		Echvi_4337	0.55	-1.3
5,185,865	+		Echvi_4337	0.55	+0.5
5,185,866	-		Echvi_4337	0.55	-0.2
5,185,866	-		Echvi_4337	0.55	+0.6
5,185,871	+		Echvi_4337	0.56	-2.7
5,185,871	+		Echvi_4337	0.56	-0.5
5,185,871	+		Echvi_4337	0.56	+0.7
5,185,871	+		Echvi_4337	0.56	+0.5
5,185,871	+		Echvi_4337	0.56	-0.2
5,185,871	+		Echvi_4337	0.56	+0.4
5,185,871	+		Echvi_4337	0.56	-0.5
5,185,871	+		Echvi_4337	0.56	+1.0
5,185,871	+		Echvi_4337	0.56	-0.4
5,185,871	+		Echvi_4337	0.56	+1.9
5,185,871	+		Echvi_4337	0.56	+0.1
5,185,871	+		Echvi_4337	0.56	-0.1
5,185,872	-		Echvi_4337	0.56	-0.3
5,185,872	-		Echvi_4337	0.56	+0.8
5,185,872	-		Echvi_4337	0.56	-0.1
5,185,872	-		Echvi_4337	0.56	+1.3
5,185,872	-		Echvi_4337	0.56	-2.0
5,185,872	-		Echvi_4337	0.56	+1.4
5,185,872	-		Echvi_4337	0.56	-1.2
5,185,872	-		Echvi_4337	0.56	-1.6
5,185,872	-		Echvi_4337	0.56	+0.0
5,185,872	-		Echvi_4337	0.56	-0.9
5,185,872	-		Echvi_4337	0.56	+0.8
5,185,872	-		Echvi_4337	0.56	-0.7
5,185,872	-		Echvi_4337	0.56	-1.6
5,185,872	-		Echvi_4337	0.56	-0.6
5,185,872	-		Echvi_4337	0.56	+0.9
5,185,887	-		Echvi_4337	0.56	+0.6
5,185,896	-		Echvi_4337	0.57	+0.3
5,185,901	-		Echvi_4337	0.57	+0.9
5,185,965	+		Echvi_4337	0.60	+0.1
5,185,965	+		Echvi_4337	0.60	-0.2
5,185,965	+		Echvi_4337	0.60	+0.2
5,185,965	+		Echvi_4337	0.60	-0.7
5,185,967	+		Echvi_4337	0.60	+0.2
5,185,967	+		Echvi_4337	0.60	-1.2
5,185,968	-		Echvi_4337	0.60	+1.1
5,185,968	-		Echvi_4337	0.60	-1.3
5,185,968	-		Echvi_4337	0.60	+0.8
5,186,012	-		Echvi_4337	0.62	+0.3
5,186,092	+		Echvi_4337	0.66	+0.3
5,186,145	+		Echvi_4337	0.69	-2.5
5,186,145	+		Echvi_4337	0.69	+1.3
5,186,145	+		Echvi_4337	0.69	-0.7
5,186,240	+		Echvi_4337	0.73	-1.4
5,186,240	+		Echvi_4337	0.73	-2.4
5,186,240	+		Echvi_4337	0.73	-0.7
5,186,247	-		Echvi_4337	0.74	-0.5
5,186,256	-		Echvi_4337	0.74	-0.2
5,186,370	+		Echvi_4337	0.79	-0.6
5,186,371	-		Echvi_4337	0.79	-1.9
5,186,371	-		Echvi_4337	0.79	-1.1
5,186,391	-		Echvi_4337	0.80	-0.7
5,186,408	+		Echvi_4337	0.81	+0.6
5,186,408	+		Echvi_4337	0.81	-2.0
5,186,421	+		Echvi_4337	0.82	+1.9
5,186,498	+		Echvi_4337	0.85	-2.0
5,186,498	+		Echvi_4337	0.85	-2.3
5,186,498	+		Echvi_4337	0.85	-0.5
5,186,498	+		Echvi_4337	0.85	+0.0
5,186,499	-		Echvi_4337	0.86	+1.7
5,186,511	+		Echvi_4337	0.86	-0.1
5,186,512	-		Echvi_4337	0.86	+0.4
5,186,571	-		Echvi_4337	0.89	+0.3
5,186,571	-		Echvi_4337	0.89	-1.2
5,186,607	+				-0.7
5,186,619	-				+0.3
5,186,679	+				-0.0
5,186,679	+				-2.2
5,186,679	+				+0.9
5,186,680	-				-0.2
5,186,680	-				+0.1
5,186,729	+				+0.7
5,186,730	-				-2.1
5,186,839	+				+0.8
5,186,839	+				-0.5
5,186,840	-				-1.6
5,186,840	-				+0.4
5,186,840	-				-0.1
5,186,840	-				+0.1
5,186,953	+		Echvi_4338	0.19	+1.9
5,186,953	+		Echvi_4338	0.19	-0.8
5,186,989	-		Echvi_4338	0.23	+0.6
5,186,989	-		Echvi_4338	0.23	-0.4
5,186,989	-		Echvi_4338	0.23	-1.0
5,187,010	-		Echvi_4338	0.26	+0.9
5,187,168	+		Echvi_4338	0.47	+1.5
5,187,322	-		Echvi_4338	0.67	+0.7
5,187,322	-		Echvi_4338	0.67	-0.0
5,187,396	+		Echvi_4338	0.76	-0.0
5,187,397	-		Echvi_4338	0.76	+0.1
5,187,397	-		Echvi_4338	0.76	+0.5
5,187,408	+		Echvi_4338	0.78	+1.0
5,187,408	+		Echvi_4338	0.78	-0.1
5,187,408	+		Echvi_4338	0.78	+0.7
5,187,408	+		Echvi_4338	0.78	-0.2
5,187,409	-		Echvi_4338	0.78	-0.0
5,187,409	-		Echvi_4338	0.78	-0.1
5,187,427	+		Echvi_4338	0.80	+1.6
5,187,566	-				+0.2
5,187,566	-				-0.3
5,187,582	+				-0.0
5,187,583	-				-0.2
5,187,614	-				+0.6
5,187,632	-				-1.6
5,187,632	-				-0.1
5,187,632	-				+1.9
5,187,635	+				-1.0
5,187,636	-				-0.1
5,187,641	-				-0.4
5,187,658	-				+1.7
5,187,735	-				+0.0
5,187,817	+		Echvi_4339	0.15	-0.9
5,187,907	-		Echvi_4339	0.23	-0.1
5,187,964	-		Echvi_4339	0.27	-0.8
5,187,964	-		Echvi_4339	0.27	+0.2
5,187,964	-		Echvi_4339	0.27	-1.3
5,188,037	+		Echvi_4339	0.34	+0.3
5,188,072	-		Echvi_4339	0.36	+0.2
5,188,072	-		Echvi_4339	0.36	+0.7
5,188,072	-		Echvi_4339	0.36	-0.1
5,188,073	+		Echvi_4339	0.37	-2.9
5,188,242	+		Echvi_4339	0.51	-0.8
5,188,243	-		Echvi_4339	0.51	+1.1
5,188,247	+		Echvi_4339	0.51	-0.9
5,188,247	+		Echvi_4339	0.51	+0.1
5,188,248	-		Echvi_4339	0.51	+0.9
5,188,346	+		Echvi_4339	0.60	-0.3
5,188,346	+		Echvi_4339	0.60	-0.5
5,188,347	-		Echvi_4339	0.60	-1.2
5,188,347	-		Echvi_4339	0.60	-1.1
5,188,348	+		Echvi_4339	0.60	+0.1
5,188,348	+		Echvi_4339	0.60	-0.9
5,188,348	+		Echvi_4339	0.60	-1.0
5,188,348	+		Echvi_4339	0.60	+0.3
5,188,348	+		Echvi_4339	0.60	-0.3
5,188,349	-		Echvi_4339	0.60	-0.6
5,188,349	-		Echvi_4339	0.60	-0.1
5,188,349	-		Echvi_4339	0.60	-0.3
5,188,349	-		Echvi_4339	0.60	+0.5
5,188,349	-		Echvi_4339	0.60	+0.5
5,188,349	-		Echvi_4339	0.60	-1.3
5,188,349	-		Echvi_4339	0.60	+1.1
5,188,349	-		Echvi_4339	0.60	+0.7
5,188,349	-		Echvi_4339	0.60	-0.1
5,188,349	-		Echvi_4339	0.60	+0.8
5,188,349	-		Echvi_4339	0.60	-0.6
5,188,349	-		Echvi_4339	0.60	-0.7
5,188,349	-		Echvi_4339	0.60	-0.5
5,188,381	-		Echvi_4339	0.62	-0.7
5,188,392	+		Echvi_4339	0.63	-0.4
5,188,393	-		Echvi_4339	0.63	+0.1
5,188,484	+		Echvi_4339	0.71	-0.9
5,188,485	-		Echvi_4339	0.71	+0.9
5,188,486	+		Echvi_4339	0.71	-0.7
5,188,486	+		Echvi_4339	0.71	-0.2
5,188,486	+		Echvi_4339	0.71	-1.0
5,188,486	+		Echvi_4339	0.71	+0.3
5,188,487	-		Echvi_4339	0.71	-0.3
5,188,487	-		Echvi_4339	0.71	-0.3
5,188,487	-		Echvi_4339	0.71	+0.0
5,188,487	-		Echvi_4339	0.71	-0.2
5,188,487	-		Echvi_4339	0.71	+1.3
5,188,532	-		Echvi_4339	0.75	+0.1